Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p010511 Quercus lobata HOM05D001717 ORTHO05D035052 2.5e-43 178.3 86 100.0
QL07p006838 Quercus lobata HOM05D001717 ORTHO05D035052 2.1e-26 122.1 86 76.7
Cfa016725 Carpinus fangiana HOM05D001717 ORTHO05D003569 3.7e-15 84.7 93 53.8
Prupe.7G046100 Prunus persica HOM05D001717 ORTHO05D003569 6.3e-15 84.0 93 51.6
RcHm_v2.0_Chr2g0125001 Rosa chinensis HOM05D001717 ORTHO05D003569 6.3e-15 84.0 93 51.6
Haze_19735 Corylus avellana HOM05D001717 ORTHO05D003569 8.3e-15 83.6 93 52.7
Duzib106G1841 Durio zibethinus HOM05D001717 ORTHO05D003569 8.3e-15 83.6 92 51.1
Oeu008200.1 Olea europaea HOM05D001717 ORTHO05D003569 8.3e-15 83.6 93 51.6
Glyma.03G128900 Glycine max HOM05D001717 ORTHO05D003569 1.1e-14 83.2 98 50.0
CiPaw.09G044400 Carya illinoinensis HOM05D001717 ORTHO05D003569 1.4e-14 82.8 93 51.6
CSS0017943 Camellia sinensis var. sinensis HOM05D001717 ORTHO05D003569 2.4e-14 82.0 93 50.5
CSS0031629 Camellia sinensis var. sinensis HOM05D001717 ORTHO05D003569 2.4e-14 82.0 93 50.5
Ciclev10004730m.g Citrus clementina HOM05D001717 ORTHO05D003569 2.4e-14 82.0 93 51.6
Gohir.A13G002600 Gossypium hirsutum HOM05D001717 ORTHO05D003569 2.4e-14 82.0 93 51.6
Gorai.013G002400 Gossypium raimondii HOM05D001717 ORTHO05D003569 2.4e-14 82.0 93 51.6
Manes.09G008200 Manihot esculenta HOM05D001717 ORTHO05D003569 2.4e-14 82.0 93 50.5
Medtr7g090150 Medicago truncatula HOM05D001717 ORTHO05D003569 2.4e-14 82.0 93 50.5
QL07p006624 Quercus lobata HOM05D001717 ORTHO05D003569 2.4e-14 82.0 93 51.6
TPR.G9309 Trifolium pratense HOM05D001717 ORTHO05D003569 2.4e-14 82.0 93 50.5
TWI74G1283 Tripterygium wilfordii HOM05D001717 ORTHO05D003569 2.4e-14 82.0 93 52.7
VMungo1383G1203 Vigna mungo HOM05D001717 ORTHO05D003569 2.4e-14 82.0 93 50.5
Ca_08400_v3 Cicer arietinum L. HOM05D001717 ORTHO05D003569 3.1e-14 81.6 93 50.5
Phvul.001G124400 Phaseolus vulgaris HOM05D001717 ORTHO05D003569 3.1e-14 81.6 93 50.5
Cc07_g16620 Coffea canephora HOM05D001717 ORTHO05D003569 4.1e-14 81.3 93 50.5
FvH4_6g25130 Fragaria vesca HOM05D001717 ORTHO05D003569 5.4e-14 80.9 93 49.5
FAN02G3254 Fragaria x ananassa HOM05D001717 ORTHO05D003569 5.4e-14 80.9 93 49.5
FAN05G2536 Fragaria x ananassa HOM05D001717 ORTHO05D003569 5.4e-14 80.9 93 49.5
FAN09G3697 Fragaria x ananassa HOM05D001717 ORTHO05D003569 5.4e-14 80.9 93 49.5
FAN14G1172 Fragaria x ananassa HOM05D001717 ORTHO05D003569 5.4e-14 80.9 93 49.5
Potri.016G040200 Populus trichocarpa HOM05D001717 ORTHO05D003569 5.4e-14 80.9 93 48.4
TAR633G0503 Trochodendron aralioides HOM05D001717 ORTHO05D003569 5.4e-14 80.9 93 51.6
arahy.Tifrunner.gnm1.ann1.UU7DQI Arachis hypogaea HOM05D001717 ORTHO05D003569 7.0e-14 80.5 93 49.5
Eucgr.A02265 Eucalyptus grandis HOM05D001717 ORTHO05D003569 7.0e-14 80.5 93 50.5
Potri.006G043092 Populus trichocarpa HOM05D001717 ORTHO05D003569 7.0e-14 80.5 93 48.4
Glyma.19G131400 Glycine max HOM05D001717 ORTHO05D003569 9.1e-14 80.1 93 50.5
Thecc.05G141200 Theobroma cacao HOM05D001717 ORTHO05D003569 9.1e-14 80.1 93 50.5
Gohir.D13G002500 Gossypium hirsutum HOM05D001717 ORTHO05D003569 1.2e-13 79.7 93 49.5
unitig_8.g3493 Utricularia gibba HOM05D001717 ORTHO05D003569 1.2e-13 79.7 93 49.5
Aqoxy2G00329 Aquilegia oxysepala HOM05D001717 ORTHO05D003569 1.6e-13 79.3 93 49.5
Sabra16G0043400 Salix brachista HOM05D001717 ORTHO05D003569 1.6e-13 79.3 93 47.3
Atru.chr1.1482 Acer truncatum HOM05D001717 ORTHO05D003569 2.7e-13 78.6 93 49.5
CANSAT80G0020 Cannabis sativa HOM05D001717 ORTHO05D003569 2.7e-13 78.6 93 48.4
COL.COLO4_33941 Corchorus olitorius HOM05D001717 ORTHO05D003569 2.7e-13 78.6 93 49.5
Dinv04139 Davidia involucrata HOM05D001717 ORTHO05D003569 2.7e-13 78.6 93 49.5
MD00G1049000 Malus domestica HOM05D001717 ORTHO05D003569 2.7e-13 78.6 93 48.4
PGR031G1947 Punica granatum HOM05D001717 ORTHO05D003569 3.5e-13 78.2 93 49.5
Dinv01930 Davidia involucrata HOM05D001717 ORTHO05D003569 4.5e-13 77.8 93 49.5
Nn7g36588 Nelumbo nucifera HOM05D001717 ORTHO05D003569 4.5e-13 77.8 92 50.0
Nitab4.5_0000515g0180 Nicotiana tabacum HOM05D001717 ORTHO05D003569 4.5e-13 77.8 93 46.2
Nitab4.5_0002267g0080 Nicotiana tabacum HOM05D001717 ORTHO05D003569 4.5e-13 77.8 93 46.2
Sc19g0008320 Simmondsia chinensis HOM05D001717 ORTHO05D003569 4.5e-13 77.8 93 47.3
CSS0019492 Camellia sinensis var. sinensis HOM05D001717 ORTHO05D003569 5.9e-13 77.4 93 47.3
Hma1.2p1_0005F.1_g004360 Hydrangea macrophylla HOM05D001717 ORTHO05D003569 5.9e-13 77.4 93 49.5
MBI18_g12037_MAGBIO Magnolia biondii HOM05D001717 ORTHO05D003569 5.9e-13 77.4 93 48.4
Psat3g078040 Pisum sativum HOM05D001717 ORTHO05D003569 7.7e-13 77.0 93 48.4
SGA_v2.0_scaffold69G23142 Striga asiatica HOM05D001717 ORTHO05D003569 1.0e-12 76.6 93 48.4
MELO3C020744.2 Cucumis melo HOM05D001717 ORTHO05D003569 1.3e-12 76.3 93 48.4
DCAR_020544 Daucus carota HOM05D001717 ORTHO05D003569 1.3e-12 76.3 41 82.9
Rhsim04G0109400 Rhododendron simsii HOM05D001717 ORTHO05D003569 1.3e-12 76.3 41 82.9
CsaV3_4G022080 Cucumis sativus L. HOM05D001717 ORTHO05D003569 2.3e-12 75.5 93 48.4
Lj2P394T25 Lonicera japonica HOM05D001717 ORTHO05D003569 2.3e-12 75.5 93 47.3
PSO478G0938 Papaver somniferum HOM05D001717 ORTHO05D003569 2.3e-12 75.5 93 48.4
Sopen04g009940 Solanum pennellii HOM05D001717 ORTHO05D003569 2.3e-12 75.5 93 46.2
PSO782G3407 Papaver somniferum HOM05D001717 ORTHO05D003569 2.9e-12 75.1 93 48.4
Sed0020515 Sechium edule HOM05D001717 ORTHO05D003569 2.9e-12 75.1 41 82.9
PGSC0003DMG400010637 Solanum tuberosum HOM05D001717 ORTHO05D003569 2.9e-12 75.1 93 46.2
Lj1g0002211 Lotus japonicus HOM05D001717 ORTHO05D003569 3.8e-12 74.7 93 47.3
Solyc04g040190.1 Solanum lycopersicum HOM05D001717 ORTHO05D003569 3.8e-12 74.7 93 46.2
Lalb_Chr14g0365941 Lupinus albus HOM05D001717 ORTHO05D003569 5.0e-12 74.3 93 46.2
Solyc10g079480.1 Solanum lycopersicum HOM05D001717 ORTHO05D003569 5.0e-12 74.3 93 44.1
Sopen10g030120 Solanum pennellii HOM05D001717 ORTHO05D003569 5.0e-12 74.3 93 44.1
EL10Ac3g07193 Beta vulgaris HOM05D001717 ORTHO05D003569 6.6e-12 73.9 41 78.0
CAN.G1237.36 Capsicum annuum HOM05D001717 ORTHO05D003569 6.6e-12 73.9 93 45.2
CAN.G641.43 Capsicum annuum HOM05D001717 ORTHO05D003569 6.6e-12 73.9 93 44.1
PGSC0003DMG400008159 Solanum tuberosum HOM05D001717 ORTHO05D003569 6.6e-12 73.9 93 44.1
ClCG04G004090 Citrullus lanatus HOM05D001717 ORTHO05D003569 8.6e-12 73.6 93 48.4
Migut.J01681 Erythranthe guttata HOM05D001717 ORTHO05D003569 8.6e-12 73.6 93 45.2
Peaxi162Scf01029g00046 Petunia axillaris HOM05D001717 ORTHO05D003569 1.1e-11 73.2 93 45.2
AUR62030363 Chenopodium quinoa HOM05D001717 ORTHO05D003569 2.5e-11 72.0 93 44.1
AUR62040846 Chenopodium quinoa HOM05D001717 ORTHO05D003569 2.5e-11 72.0 93 44.1
Sabra16G0043300 Salix brachista HOM05D001717 ORTHO05D003569 3.3e-11 71.6 41 75.6
HanXRQChr09g0260001 Helianthus annuus HOM05D001717 ORTHO05D003569 4.2e-11 71.2 41 78.0
Ah.13g077030 Amaranthus hybridus HOM05D001717 ORTHO05D003569 5.5e-11 70.9 93 46.2
ATR1093G052 Amborella trichopoda HOM05D001717 ORTHO05D003569 5.5e-11 70.9 93 44.1
Lsat_1_v5_gn_5_159240 Lactuca sativa HOM05D001717 ORTHO05D003569 7.2e-11 70.5 41 78.0
Sp3g08510 Schrenkiella parvula HOM05D001717 ORTHO05D003569 7.2e-11 70.5 93 41.9
ECA248G1731 Erigeron canadensis HOM05D001717 ORTHO05D003569 9.5e-11 70.1 41 78.0
C05p57910 Brassica napus HOM05D001717 ORTHO05D003569 1.2e-10 69.7 93 43.0
BolC5t34446H Brassica oleracea HOM05D001717 ORTHO05D003569 1.2e-10 69.7 93 43.0
Aa31LG3G2800 Aethionema arabicum HOM05D001717 ORTHO05D003569 2.8e-10 68.6 93 43.0
A05p38870 Brassica napus HOM05D001717 ORTHO05D003569 2.8e-10 68.6 93 40.9
BraA05t22679Z Brassica rapa HOM05D001717 ORTHO05D003569 2.8e-10 68.6 93 41.9
THA.LOC104823211 Tarenaya hassleriana HOM05D001717 ORTHO05D003569 2.8e-10 68.6 93 41.9
THA.LOC104826887 Tarenaya hassleriana HOM05D001717 ORTHO05D003569 2.8e-10 68.6 93 41.9
BcaNung05526 Brassica carinata HOM05D001717 ORTHO05D003569 3.6e-10 68.2 93 39.8
Dinv03856 Davidia involucrata HOM05D001717 ORTHO05D003569 8.0e-10 67.0 91 44.0
Ah.04g151130 Amaranthus hybridus HOM05D001717 ORTHO05D003569 1.0e-09 66.6 93 41.9
Carub.0003s0940 Capsella rubella HOM05D001717 ORTHO05D003569 1.0e-09 66.6 93 39.8
CARHR084720 Cardamine hirsuta HOM05D001717 ORTHO05D003569 1.0e-09 66.6 93 39.8
Thhalv10020573m.g Eutrema salsugineum HOM05D001717 ORTHO05D003569 1.0e-09 66.6 93 40.9
Dinv03851 Davidia involucrata HOM05D001717 ORTHO05D003569 1.4e-09 66.2 40 75.0
SEGI_23173 Sequoiadendron giganteum HOM05D001717 ORTHO05D003569 1.4e-09 66.2 93 38.7
AL3G21570 Arabidopsis lyrata HOM05D001717 ORTHO05D003569 2.3e-09 65.5 41 65.9
AT3G10230 Arabidopsis thaliana HOM05D001717 ORTHO05D003569 2.3e-09 65.5 41 65.9
Dinv00504 Davidia involucrata HOM05D001717 ORTHO05D003569 3.0e-09 65.1 91 42.9
Zm00001eb234930 Zea mays HOM05D001717 ORTHO05D003569 3.0e-09 65.1 95 42.1
CiPaw.10G038100 Carya illinoinensis HOM05D001717 ORTHO05D003569 6.8e-09 63.9 73 49.3
CDE10G0702 Ceratophyllum demersum HOM05D001717 ORTHO05D003569 6.8e-09 63.9 41 68.3
Os02g0190600 Oryza sativa ssp. japonica HOM05D001717 ORTHO05D003569 1.2e-08 63.2 40 70.0
HPP92_026135 Vanilla planifolia HOM05D001717 ORTHO05D003569 2.2e-07 58.9 35 68.6
SEGI_17641 Sequoiadendron giganteum HOM05D001717 ORTHO05D003569 4.9e-07 57.8 41 56.1
Mapoly0057s0029 Marchantia polymorpha HOM05D001717 ORTHO05D003569 1.8e-06 55.8 38 57.9
SMO364G0637 Selaginella moellendorffii HOM05D001717 ORTHO05D003569 1.8e-06 55.8 41 53.7
CSS0033690 Camellia sinensis var. sinensis HOM05D001717 ORTHO05D003569 5.4e-06 54.3 93 38.7
Pp3c3_30970 Physcomitrium patens HOM05D001717 ORTHO05D003569 7.0e-06 53.9 38 60.5


User provided reference genes

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