Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p009147 Quercus lobata HOM05D001335 ORTHO05D001184 1.7e-54 215.7 103 100.0
QL04p074394 Quercus lobata HOM05D001335 ORTHO05D001184 1.6e-12 76.3 43 79.1
QL04p074409 Quercus lobata HOM05D001335 ORTHO05D001184 1.6e-12 76.3 43 81.4
QL04p074383 Quercus lobata HOM05D001335 ORTHO05D001184 2.1e-12 75.9 43 79.1
QL04p074141 Quercus lobata HOM05D001335 ORTHO05D001184 4.6e-12 74.7 33 100.0
QL04p074163 Quercus lobata HOM05D001335 ORTHO05D001184 4.6e-12 74.7 43 79.1
QL12p009175 Quercus lobata HOM05D001335 ORTHO05D001184 2.3e-11 72.4 43 79.1
QL04p074452 Quercus lobata HOM05D001335 ORTHO05D001184 5.1e-11 71.2 43 76.7
QL10p022402 Quercus lobata HOM05D001335 ORTHO05D001184 5.1e-11 71.2 43 76.7
QL04p074113 Quercus lobata HOM05D001335 ORTHO05D001184 2.4e-08 62.4 32 87.5
CiPaw.01G220300 Carya illinoinensis HOM05D001335 ORTHO05D001184 3.1e-08 62.0 36 72.2
GSVIVG01027214001 Vitis vinifera HOM05D001335 ORTHO05D001184 2.0e-07 59.3 43 65.1
arahy.Tifrunner.gnm1.ann1.3ZLA4U Arachis hypogaea HOM05D001335 ORTHO05D001184 5.8e-07 57.8 37 64.9
arahy.Tifrunner.gnm1.ann1.A57DXV Arachis hypogaea HOM05D001335 ORTHO05D001184 7.6e-07 57.4 37 64.9
Ca_25982_v3 Cicer arietinum L. HOM05D001335 ORTHO05D001184 9.9e-07 57.0 42 59.5
SEGI_34732 Sequoiadendron giganteum HOM05D001335 ORTHO05D001184 9.9e-07 57.0 43 60.5
Medtr8g028700 Medicago truncatula HOM05D001335 ORTHO05D001184 1.3e-06 56.6 44 54.5
CSS0042180 Camellia sinensis var. sinensis HOM05D001335 ORTHO05D001184 1.7e-06 56.2 45 53.3
Haze_20412 Corylus avellana HOM05D001335 ORTHO05D001184 2.2e-06 55.8 49 49.0
Prupe.2G102200 Prunus persica HOM05D001335 ORTHO05D001184 2.2e-06 55.8 36 63.9
Atru.chr1.1507 Acer truncatum HOM05D001335 ORTHO05D001184 2.9e-06 55.5 44 56.8
AL7G27650 Arabidopsis lyrata HOM05D001335 ORTHO05D001184 3.8e-06 55.1 43 53.5
AT4G25440 Arabidopsis thaliana HOM05D001335 ORTHO05D001184 3.8e-06 55.1 43 53.5
BcaC09g50768 Brassica carinata HOM05D001335 ORTHO05D001184 3.8e-06 55.1 43 53.5
BcaNung03696 Brassica carinata HOM05D001335 ORTHO05D001184 3.8e-06 55.1 43 53.5
A01p16750 Brassica napus HOM05D001335 ORTHO05D001184 3.8e-06 55.1 43 53.5
CSS0048137 Camellia sinensis var. sinensis HOM05D001335 ORTHO05D001184 3.8e-06 55.1 45 53.3
Ciclev10004933m.g Citrus clementina HOM05D001335 ORTHO05D001184 4.9e-06 54.7 36 61.1
Thhalv10025269m.g Eutrema salsugineum HOM05D001335 ORTHO05D001184 4.9e-06 54.7 41 58.5
Medtr8g032850 Medicago truncatula HOM05D001335 ORTHO05D001184 4.9e-06 54.7 44 52.3
Psat4g151480 Pisum sativum HOM05D001335 ORTHO05D001184 4.9e-06 54.7 44 56.8
Psat4g151520 Pisum sativum HOM05D001335 ORTHO05D001184 4.9e-06 54.7 44 56.8
C01p21050 Brassica napus HOM05D001335 ORTHO05D001184 6.4e-06 54.3 43 53.5
CARHR232870 Cardamine hirsuta HOM05D001335 ORTHO05D001184 6.4e-06 54.3 43 53.5
MD02G1195200 Malus domestica HOM05D001335 ORTHO05D001184 6.4e-06 54.3 43 55.8
Nitab4.5_0007088g0030 Nicotiana tabacum HOM05D001335 ORTHO05D001184 6.4e-06 54.3 43 51.2
PSO478G4066 Papaver somniferum HOM05D001335 ORTHO05D001184 6.4e-06 54.3 41 56.1
Carub.0007s1554 Capsella rubella HOM05D001335 ORTHO05D001184 8.4e-06 53.9 43 53.5
FvH4_2g11580 Fragaria vesca HOM05D001335 ORTHO05D001184 8.4e-06 53.9 43 55.8
FAN15G2373 Fragaria x ananassa HOM05D001335 ORTHO05D001184 8.4e-06 53.9 43 55.8
FAN24G1612 Fragaria x ananassa HOM05D001335 ORTHO05D001184 8.4e-06 53.9 43 55.8
FAN27G2370 Fragaria x ananassa HOM05D001335 ORTHO05D001184 8.4e-06 53.9 43 55.8
Sp7g23490 Schrenkiella parvula HOM05D001335 ORTHO05D001184 8.4e-06 53.9 43 53.5


User provided reference genes

Program Settings