Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p008732 Quercus lobata HOM05D006150 ORTHO05D007745 1.1e-242 842.8 406 100.0
Haze_08363 Corylus avellana HOM05D006150 ORTHO05D007745 3.2e-141 505.8 408 66.2
Cfa012327 Carpinus fangiana HOM05D006150 ORTHO05D007745 1.1e-136 490.7 408 63.7
CiPaw.11G072300 Carya illinoinensis HOM05D006150 ORTHO05D007745 2.5e-130 469.5 399 61.2
CSS0019555 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 9.6e-130 467.6 401 60.3
Gohir.A12G212700 Gossypium hirsutum HOM05D006150 ORTHO05D007745 2.8e-129 466.1 411 59.6
TAR636G1440 Trochodendron aralioides HOM05D006150 ORTHO05D007745 4.8e-129 465.3 399 60.9
Gorai.008G230800 Gossypium raimondii HOM05D006150 ORTHO05D007745 1.8e-128 463.4 397 59.7
Gohir.D12G215200 Gossypium hirsutum HOM05D006150 ORTHO05D007745 1.5e-127 460.3 397 59.2
RcHm_v2.0_Chr7g0205681 Rosa chinensis HOM05D006150 ORTHO05D007745 9.9e-127 457.6 398 59.8
Lj8A277T42 Lonicera japonica HOM05D006150 ORTHO05D007745 3.8e-126 455.7 393 59.8
PGSC0003DMG400026243 Solanum tuberosum HOM05D006150 ORTHO05D007745 3.8e-126 455.7 400 59.0
Hma1.2p1_0570F.1_g180430 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 1.1e-125 454.1 396 59.3
Thecc.03G240100 Theobroma cacao HOM05D006150 ORTHO05D007745 1.4e-125 453.8 403 57.8
Rhsim07G0136400 Rhododendron simsii HOM05D006150 ORTHO05D007745 1.9e-125 453.4 403 59.3
MBI04_g13858_MAGBIO Magnolia biondii HOM05D006150 ORTHO05D007745 2.4e-125 453.0 399 58.6
CANSAT21G0710 Cannabis sativa HOM05D006150 ORTHO05D007745 4.2e-125 452.2 403 59.3
COL.COLO4_07285 Corchorus olitorius HOM05D006150 ORTHO05D007745 7.1e-125 451.4 400 58.5
ClCG10G005070 Citrullus lanatus HOM05D006150 ORTHO05D007745 1.6e-124 450.3 399 58.4
Duzib084G0008 Durio zibethinus HOM05D006150 ORTHO05D007745 2.7e-124 449.5 405 57.3
Solyc08g077840.3 Solanum lycopersicum HOM05D006150 ORTHO05D007745 2.7e-124 449.5 399 58.1
Sopen08g026350 Solanum pennellii HOM05D006150 ORTHO05D007745 3.5e-124 449.1 400 58.2
MD04G1055500 Malus domestica HOM05D006150 ORTHO05D007745 6.0e-124 448.4 400 59.5
THA.LOC104807929 Tarenaya hassleriana HOM05D006150 ORTHO05D007745 6.0e-124 448.4 398 58.8
CAN.G572.11 Capsicum annuum HOM05D006150 ORTHO05D007745 1.0e-123 447.6 401 58.9
Ciclev10021365m.g Citrus clementina HOM05D006150 ORTHO05D007745 1.8e-123 446.8 399 57.9
FAN04G1813 Fragaria x ananassa HOM05D006150 ORTHO05D007745 1.9e-122 443.4 399 58.4
Cc08_g11330 Coffea canephora HOM05D006150 ORTHO05D007745 4.3e-122 442.2 400 57.5
CsaV3_3G004750 Cucumis sativus L. HOM05D006150 ORTHO05D007745 5.6e-122 441.8 399 57.9
Manes.01G089000 Manihot esculenta HOM05D006150 ORTHO05D007745 1.6e-121 440.3 399 57.6
TWI60G0542 Tripterygium wilfordii HOM05D006150 ORTHO05D007745 3.7e-121 439.1 397 56.4
CARHR223610 Cardamine hirsuta HOM05D006150 ORTHO05D007745 4.8e-121 438.7 399 56.9
FAN08G0760 Fragaria x ananassa HOM05D006150 ORTHO05D007745 4.8e-121 438.7 393 58.5
DCAR_008330 Daucus carota HOM05D006150 ORTHO05D007745 8.2e-121 438.0 403 57.1
BraA03t14117Z Brassica rapa HOM05D006150 ORTHO05D007745 1.4e-120 437.2 407 56.8
Potri.003G083600 Populus trichocarpa HOM05D006150 ORTHO05D007745 1.4e-120 437.2 405 57.8
FvH4_5g20400 Fragaria vesca HOM05D006150 ORTHO05D007745 1.8e-120 436.8 398 57.8
Nn6g33757 Nelumbo nucifera HOM05D006150 ORTHO05D007745 1.8e-120 436.8 393 58.0
MSTRG.6640 Avicennia marina HOM05D006150 ORTHO05D007745 2.4e-120 436.4 413 55.7
Carub.0007s2437 Capsella rubella HOM05D006150 ORTHO05D007745 4.0e-120 435.6 398 57.0
BcaNung04656 Brassica carinata HOM05D006150 ORTHO05D007745 6.9e-120 434.9 407 56.5
PSO675G6476 Papaver somniferum HOM05D006150 ORTHO05D007745 6.9e-120 434.9 401 57.4
BraA01t01953Z Brassica rapa HOM05D006150 ORTHO05D007745 9.0e-120 434.5 400 56.2
AT4G17050 Arabidopsis thaliana HOM05D006150 ORTHO05D007745 1.2e-119 434.1 396 57.3
Eucgr.D02133 Eucalyptus grandis HOM05D006150 ORTHO05D007745 2.0e-119 433.3 404 56.7
AL7G37660 Arabidopsis lyrata HOM05D006150 ORTHO05D007745 3.4e-119 432.6 396 56.8
A03p50280 Brassica napus HOM05D006150 ORTHO05D007745 3.4e-119 432.6 407 56.5
C07p48460 Brassica napus HOM05D006150 ORTHO05D007745 5.8e-119 431.8 400 56.8
PSO732G0290 Papaver somniferum HOM05D006150 ORTHO05D007745 5.8e-119 431.8 401 57.6
Atru.chr9.1206 Acer truncatum HOM05D006150 ORTHO05D007745 1.0e-118 431.0 408 56.4
C07p48520 Brassica napus HOM05D006150 ORTHO05D007745 1.0e-118 431.0 407 56.0
BolC7t45360H Brassica oleracea HOM05D006150 ORTHO05D007745 1.0e-118 431.0 407 56.0
EL10Ac5g12270 Beta vulgaris HOM05D006150 ORTHO05D007745 4.9e-118 428.7 401 57.1
Sed0022790 Sechium edule HOM05D006150 ORTHO05D007745 4.9e-118 428.7 399 56.4
BolC1t02493H Brassica oleracea HOM05D006150 ORTHO05D007745 8.4e-118 427.9 406 55.4
arahy.Tifrunner.gnm1.ann1.IPM3U6 Arachis hypogaea HOM05D006150 ORTHO05D007745 1.1e-117 427.6 399 56.4
SalBow7G3619 Salvia bowleyana HOM05D006150 ORTHO05D007745 1.1e-117 427.6 392 56.6
Sp7g17140 Schrenkiella parvula HOM05D006150 ORTHO05D007745 1.4e-117 427.2 406 55.2
BcaNung00130 Brassica carinata HOM05D006150 ORTHO05D007745 3.2e-117 426.0 406 55.2
HanXRQChr17g0534011 Helianthus annuus HOM05D006150 ORTHO05D007745 9.3e-117 424.5 406 54.9
C07p48390 Brassica napus HOM05D006150 ORTHO05D007745 2.1e-116 423.3 406 55.7
Glyma.05G066500 Glycine max HOM05D006150 ORTHO05D007745 2.1e-116 423.3 406 54.9
Nitab4.5_0009451g0030 Nicotiana tabacum HOM05D006150 ORTHO05D007745 2.1e-116 423.3 401 57.4
arahy.Tifrunner.gnm1.ann1.YY6LCE Arachis hypogaea HOM05D006150 ORTHO05D007745 7.9e-116 421.4 399 56.4
BcaC06g33538 Brassica carinata HOM05D006150 ORTHO05D007745 7.9e-116 421.4 399 55.9
Glyma.17G148400 Glycine max HOM05D006150 ORTHO05D007745 2.3e-115 419.9 399 55.1
ATR0665G013 Amborella trichopoda HOM05D006150 ORTHO05D007745 6.7e-115 418.3 399 55.1
Lalb_Chr09g0329771 Lupinus albus HOM05D006150 ORTHO05D007745 8.7e-115 417.9 404 55.4
Ah.12g053980 Amaranthus hybridus HOM05D006150 ORTHO05D007745 1.9e-114 416.8 400 55.0
ECA234G2169 Erigeron canadensis HOM05D006150 ORTHO05D007745 1.9e-114 416.8 403 54.6
Lj4g0002003 Lotus japonicus HOM05D006150 ORTHO05D007745 3.3e-114 416.0 404 55.2
Phvul.003G225600 Phaseolus vulgaris HOM05D006150 ORTHO05D007745 1.6e-113 413.7 399 54.4
Nitab4.5_0000500g0240 Nicotiana tabacum HOM05D006150 ORTHO05D007745 2.2e-113 413.3 402 56.5
PSO732G0039 Papaver somniferum HOM05D006150 ORTHO05D007745 2.2e-113 413.3 379 56.5
PGR031G0533 Punica granatum HOM05D006150 ORTHO05D007745 2.4e-112 409.8 366 57.7
A01p20260 Brassica napus HOM05D006150 ORTHO05D007745 6.9e-112 408.3 390 55.6
VMungo0251G1767 Vigna mungo HOM05D006150 ORTHO05D007745 6.9e-112 408.3 399 53.1
Os07g0495000 Oryza sativa ssp. japonica HOM05D006150 ORTHO05D007745 2.0e-111 406.8 387 55.3
Ca_22017_v3 Cicer arietinum L. HOM05D006150 ORTHO05D007745 1.0e-110 404.4 406 53.2
TPR.G25747 Trifolium pratense HOM05D006150 ORTHO05D007745 2.2e-110 403.3 403 53.3
CDE12G0966 Ceratophyllum demersum HOM05D006150 ORTHO05D007745 3.8e-110 402.5 394 53.8
Aqoxy5G02622 Aquilegia oxysepala HOM05D006150 ORTHO05D007745 5.0e-110 402.1 411 52.3
Medtr4g099290 Medicago truncatula HOM05D006150 ORTHO05D007745 1.4e-109 400.6 400 53.8
Thhalv10026866m.g Eutrema salsugineum HOM05D006150 ORTHO05D007745 1.2e-108 397.5 401 54.6
unitig_746.g26644 Utricularia gibba HOM05D006150 ORTHO05D007745 1.2e-108 397.5 402 52.5
HPP92_025744 Vanilla planifolia HOM05D006150 ORTHO05D007745 2.5e-106 389.8 390 53.3
Zm00001eb322060 Zea mays HOM05D006150 ORTHO05D007745 2.5e-106 389.8 385 53.5
Peaxi162Scf00301g00519 Petunia axillaris HOM05D006150 ORTHO05D007745 2.8e-105 386.3 402 53.5
Actinidia02195 Actinidia chinensis HOM05D006150 ORTHO05D007745 2.0e-103 380.2 372 55.6
vmacro00832 Vaccinium macrocarpon HOM05D006150 ORTHO05D007745 2.9e-102 376.3 401 51.6
Dinv28876 Davidia involucrata HOM05D006150 ORTHO05D007745 3.2e-101 372.9 352 56.8
BcaC09g50439 Brassica carinata HOM05D006150 ORTHO05D007745 1.4e-99 367.5 407 50.4
C01p25410 Brassica napus HOM05D006150 ORTHO05D007745 1.4e-99 367.5 407 50.4
Psat4g076080 Pisum sativum HOM05D006150 ORTHO05D007745 3.0e-99 366.3 384 51.6
SEGI_33649 Sequoiadendron giganteum HOM05D006150 ORTHO05D007745 3.3e-98 362.8 398 50.8
Sc01g0007980 Simmondsia chinensis HOM05D006150 ORTHO05D007745 9.7e-98 361.3 351 55.6
Aa31LG2G13130 Aethionema arabicum HOM05D006150 ORTHO05D007745 2.2e-94 350.1 420 47.4
GSVIVG01003685001 Vitis vinifera HOM05D006150 ORTHO05D007745 3.6e-92 342.8 244 68.9
Pp3c9_12580 Physcomitrium patens HOM05D006150 ORTHO05D007745 1.8e-91 340.5 401 46.6
Prupe.5G055300 Prunus persica HOM05D006150 ORTHO05D007745 2.0e-90 337.0 318 56.6
Oeu012348.1 Olea europaea HOM05D006150 ORTHO05D007745 6.5e-86 322.0 317 54.9
AagrBONN_evm.TU.Sc2ySwM_228.2274 Anthoceros agrestis HOM05D006150 ORTHO05D007745 1.9e-85 320.5 356 49.4
Mapoly0072s0097 Marchantia polymorpha HOM05D006150 ORTHO05D007745 1.9e-85 320.5 370 45.9
SGA_v2.0_scaffold181G39680 Striga asiatica HOM05D006150 ORTHO05D007745 6.7e-83 312.0 344 51.5
AUR62007167 Chenopodium quinoa HOM05D006150 ORTHO05D007745 3.7e-81 306.2 228 66.7
AUR62018839 Chenopodium quinoa HOM05D006150 ORTHO05D007745 8.3e-81 305.1 228 65.4
Lsat_1_v5_gn_3_15361 Lactuca sativa HOM05D006150 ORTHO05D007745 2.4e-80 303.5 354 48.9
Actinidia25909 Actinidia chinensis HOM05D006150 ORTHO05D007745 1.2e-63 248.1 401 39.9
Potri.001G150800 Populus trichocarpa HOM05D006150 ORTHO05D007745 4.7e-60 236.1 308 46.1
MCO07G379 Micromonas commoda HOM05D006150 ORTHO05D007745 4.9e-57 226.1 366 36.1
Cre06.g290000 Chlamydomonas reinhardtii HOM05D006150 ORTHO05D007745 1.6e-55 221.1 399 34.8
MD06G1047100 Malus domestica HOM05D006150 ORTHO05D007745 1.2e-52 211.5 154 68.2
Sabra01G0120800 Salix brachista HOM05D006150 ORTHO05D007745 2.3e-46 190.7 283 40.6
Hma1.2p1_0570F.1_g180440 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 3.6e-44 183.3 203 49.8
FAN18G0603 Fragaria x ananassa HOM05D006150 ORTHO05D007745 8.1e-44 182.2 218 48.6
MELO3C014174.2 Cucumis melo HOM05D006150 ORTHO05D007745 4.0e-43 179.9 399 34.6
MCO04G282 Micromonas commoda HOM05D006150 ORTHO05D007745 5.2e-43 179.5 363 34.4
CSS0048254 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 5.4e-40 169.5 96 81.2
Sabra01G0120600 Salix brachista HOM05D006150 ORTHO05D007745 4.3e-37 159.8 162 54.9
PSO717G0125 Papaver somniferum HOM05D006150 ORTHO05D007745 3.6e-36 156.8 109 69.7
Cpa.g.sc98.38 Carica papaya HOM05D006150 ORTHO05D007745 1.3e-30 138.3 80 73.8
BcaC01g03436 Brassica carinata HOM05D006150 ORTHO05D007745 8.7e-30 135.6 105 62.9
CBR_g38093 Chara braunii HOM05D006150 ORTHO05D007745 1.9e-29 134.4 66 84.8
QL02p052266 Quercus lobata HOM05D000442 ORTHO05D001979 1.4e-16 91.7 182 32.4
Cpa.g.sc98.35 Carica papaya HOM05D006150 ORTHO05D007745 1.9e-16 91.3 56 76.8
QL10p033145 Quercus lobata HOM05D006302 ORTHO05D007960 2.5e-13 80.9 215 27.4
QL01p046128 Quercus lobata HOM05D004395 ORTHO05D005234 1.6e-12 78.2 216 26.9
QL02p038779 Quercus lobata HOM05D000803 ORTHO05D007008 3.7e-12 77.0 119 37.0
QL10p034566 Quercus lobata HOM05D000252 ORTHO05D003750 1.8e-11 74.7 38 86.8
GSVIVG01021810001 Vitis vinifera HOM05D006150 ORTHO05D007745 1.8e-11 74.7 52 69.2
QL06p050558 Quercus lobata HOM05D003061 ORTHO05D003427 5.3e-11 73.2 73 45.2
QL01p048139 Quercus lobata HOM05D011240 ORTHO05D014254 6.9e-11 72.8 38 86.8
QL01p030568 Quercus lobata HOM05D000003 ORTHO05D000006 9.0e-11 72.4 87 37.9
QL02p013964 Quercus lobata HOM05D005066 ORTHO05D006138 3.4e-10 70.5 122 33.6
QL03p036039 Quercus lobata HOM05D000331 ORTHO05D000732 3.4e-10 70.5 105 36.2
QL05p014183 Quercus lobata HOM05D002342 ORTHO05D002407 4.5e-10 70.1 81 42.0
QL93p0340_0006 Quercus lobata HOM05D000003 ORTHO05D000004 4.5e-10 70.1 104 34.6
QL93p0089_0059 Quercus lobata HOM05D000003 ORTHO05D000004 5.8e-10 69.7 104 34.6
QL05p000220 Quercus lobata HOM05D000003 ORTHO05D000004 7.6e-10 69.3 119 32.8
QL04p073898 Quercus lobata HOM05D002312 ORTHO05D007981 1.0e-09 68.9 119 33.6
QL05p087707 Quercus lobata HOM05D000003 ORTHO05D000004 1.0e-09 68.9 188 28.7
QL09p038899 Quercus lobata HOM05D004102 ORTHO05D005307 1.3e-09 68.6 52 61.5
QL04p041152 Quercus lobata HOM05D000003 ORTHO05D000004 1.7e-09 68.2 171 27.5
QL06p038224 Quercus lobata HOM05D000003 ORTHO05D000004 2.2e-09 67.8 104 34.6
QL02p060053 Quercus lobata HOM05D000003 ORTHO05D000004 2.9e-09 67.4 204 26.5
QL03p039930 Quercus lobata HOM05D000003 ORTHO05D000004 3.8e-09 67.0 121 32.2
QL10p019376 Quercus lobata HOM05D000003 ORTHO05D000004 3.8e-09 67.0 142 30.3
QL10p032747 Quercus lobata HOM05D000003 ORTHO05D000004 3.8e-09 67.0 53 52.8
QL07p023149 Quercus lobata HOM05D004743 ORTHO05D005698 4.9e-09 66.6 121 33.1
QL12p001089 Quercus lobata HOM05D002988 ORTHO05D003479 8.4e-09 65.9 98 36.7
Lsat_1_v5_gn_6_74120 Lactuca sativa HOM05D006150 ORTHO05D233887 1.1e-08 65.5 58 53.4
QL03p008255 Quercus lobata HOM05D000070 ORTHO05D002524 1.1e-08 65.5 74 43.2
QL01p050350 Quercus lobata HOM05D000003 ORTHO05D000004 1.4e-08 65.1 123 34.1
QL05p041799 Quercus lobata HOM05D006990 ORTHO05D001267 1.4e-08 65.1 53 50.9
QL05p039589 Quercus lobata HOM05D000003 ORTHO05D000004 1.9e-08 64.7 156 28.2
QL02p102686 Quercus lobata HOM05D000003 ORTHO05D000004 2.5e-08 64.3 53 52.8
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 2.5e-08 64.3 79 45.6
QL06p051793 Quercus lobata HOM05D002612 ORTHO05D002859 3.2e-08 63.9 123 31.7
QL11p020696 Quercus lobata HOM05D004981 ORTHO05D005635 3.2e-08 63.9 70 44.3
QL04p030562 Quercus lobata HOM05D004124 ORTHO05D000004 5.5e-08 63.2 70 41.4
QL05p066386 Quercus lobata HOM05D000064 ORTHO05D001902 5.5e-08 63.2 53 50.9
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 5.5e-08 63.2 103 35.9
QL09p044755 Quercus lobata HOM05D000104 ORTHO05D004363 7.1e-08 62.8 53 49.1
QL02p034137 Quercus lobata HOM05D001824 ORTHO05D003650 1.6e-07 61.6 56 48.2
QL05p031553 Quercus lobata HOM05D003116 ORTHO05D000004 1.6e-07 61.6 48 56.2
QL10p021333 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-07 61.2 52 53.8
QL04p055510 Quercus lobata HOM05D000003 ORTHO05D000004 2.7e-07 60.8 52 51.9
QL03p029909 Quercus lobata HOM05D001871 ORTHO05D002022 3.5e-07 60.5 53 50.9
QL07p046070 Quercus lobata HOM05D000003 ORTHO05D000004 4.6e-07 60.1 47 61.7
QL08p026190 Quercus lobata HOM05D000472 ORTHO05D000344 4.6e-07 60.1 53 50.9
QL12p008764 Quercus lobata HOM05D003893 ORTHO05D005167 4.6e-07 60.1 49 53.1
MELO3C000773.2 Cucumis melo HOM05D006150 ORTHO05D007745 6.0e-07 59.7 39 76.9
QL03p046607 Quercus lobata HOM05D003083 ORTHO05D003466 1.0e-06 58.9 108 32.4
QL07p016023 Quercus lobata HOM05D000976 ORTHO05D000847 1.0e-06 58.9 56 51.8
QL11p050986 Quercus lobata HOM05D006047 ORTHO05D007353 1.0e-06 58.9 74 40.5
Cpa.g.sc3814.1 Carica papaya HOM05D006150 ORTHO05D007745 1.3e-06 58.5 38 65.8
Haze_08564 Corylus avellana HOM05D005971 ORTHO05D000006 1.3e-06 58.5 101 28.7
QL02p023588 Quercus lobata HOM05D001181 ORTHO05D007712 3.9e-06 57.0 72 43.1
QL02p038126 Quercus lobata HOM05D000003 ORTHO05D002480 3.9e-06 57.0 43 58.1
QL05p035325 Quercus lobata HOM05D000003 ORTHO05D012891 5.1e-06 56.6 79 38.0
QL05p027656 Quercus lobata HOM05D005108 ORTHO05D006171 6.7e-06 56.2 53 45.3
QL06p006206 Quercus lobata HOM05D001357 ORTHO05D001224 6.7e-06 56.2 108 32.4
QL03p044469 Quercus lobata HOM05D001046 ORTHO05D005883 8.7e-06 55.8 59 39.0
QL06p026672 Quercus lobata HOM05D000324 ORTHO05D004875 8.7e-06 55.8 53 45.3


User provided reference genes

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