Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 4.7e-234 814.3 456 100.0
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 1.4e-177 626.7 456 76.8
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 8.4e-175 617.5 454 68.9
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 4.6e-173 611.7 456 74.1
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 6.7e-172 607.8 459 65.8
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 8.7e-172 607.4 455 67.9
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 4.3e-171 605.1 456 66.7
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 9.7e-171 604.0 456 67.8
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 9.7e-171 604.0 457 74.6
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 1.6e-170 603.2 455 67.5
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 3.7e-170 602.1 455 73.2
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 6.3e-170 601.3 456 66.4
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 6.3e-170 601.3 456 76.5
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 1.4e-169 600.1 459 66.0
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 9.0e-169 597.4 456 65.8
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 2.6e-168 595.9 455 67.7
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 3.4e-168 595.5 460 67.0
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 1.3e-167 593.6 458 66.2
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 1.4e-166 590.1 458 65.9
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 3.2e-166 589.0 455 66.2
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 3.2e-166 589.0 458 72.5
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 6.1e-165 584.7 455 71.0
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 4.3e-163 578.6 456 70.6
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 9.7e-163 577.4 455 70.3
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 1.8e-161 573.2 456 70.2
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 5.9e-160 568.2 456 63.8
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 2.2e-159 566.2 455 71.0
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 3.8e-159 565.5 457 70.9
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 5.0e-159 565.1 458 67.2
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 5.5e-158 561.6 479 63.3
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 6.1e-157 558.1 461 64.9
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 3.0e-156 555.8 462 61.0
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 1.7e-154 550.1 460 64.1
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 2.8e-154 549.3 459 61.4
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 1.4e-153 547.0 456 61.8
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 1.8e-153 546.6 456 62.3
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 2.4e-153 546.2 458 64.6
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 2.4e-153 546.2 456 61.2
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 3.4e-152 542.3 455 61.1
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 4.5e-152 542.0 480 62.3
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 1.7e-151 540.0 456 59.9
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 2.2e-151 539.7 464 61.2
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 6.5e-151 538.1 464 61.0
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 3.2e-150 535.8 456 59.4
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 2.1e-149 533.1 461 61.2
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 4.7e-149 531.9 471 63.1
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 7.9e-149 531.2 460 65.7
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 3.0e-148 529.3 456 60.7
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 3.9e-148 528.9 455 62.6
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 5.2e-148 528.5 455 62.0
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 8.8e-148 527.7 302 83.4
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 3.3e-147 525.8 455 66.2
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 9.7e-147 524.2 460 59.3
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 1.3e-146 523.9 457 61.5
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 1.7e-146 523.5 305 80.3
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 1.7e-146 523.5 455 69.2
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 2.2e-146 523.1 460 60.2
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 6.3e-146 521.5 459 60.6
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 8.2e-146 521.2 456 65.4
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 1.4e-145 520.4 461 58.8
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 1.6e-144 516.9 457 58.4
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 2.0e-144 516.5 461 63.8
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 4.5e-144 515.4 455 60.7
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 2.9e-143 512.7 457 61.9
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 2.9e-143 512.7 456 58.8
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 5.0e-143 511.9 457 63.9
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 1.9e-142 510.0 457 63.2
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 3.2e-142 509.2 456 63.2
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 1.2e-141 507.3 306 77.8
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 4.7e-141 505.4 424 61.8
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 6.7e-140 501.5 460 59.8
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 2.0e-139 500.0 303 77.2
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 2.6e-139 499.6 305 77.4
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 3.3e-139 499.2 457 58.4
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 3.3e-139 499.2 459 58.2
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 2.2e-138 496.5 406 72.9
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 4.8e-138 495.4 301 77.1
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 8.2e-138 494.6 304 77.3
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 1.4e-137 493.8 456 60.3
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 9.1e-137 491.1 456 61.4
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 1.0e-135 487.6 465 56.8
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 1.3e-135 487.3 457 60.0
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 5.0e-135 485.3 524 54.2
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 2.0e-131 473.4 475 56.8
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 2.0e-131 473.4 382 74.6
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 7.5e-131 471.5 423 60.8
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 3.7e-130 469.2 470 56.2
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 3.7e-130 469.2 300 72.7
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 1.8e-129 466.8 492 54.7
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 7.2e-126 454.9 357 74.8
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 5.9e-120 435.3 293 70.6
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 2.0e-115 420.2 272 70.6
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 1.0e-111 407.9 231 83.5
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 2.5e-110 403.3 302 62.3
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 2.5e-110 403.3 302 62.3
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 5.6e-110 402.1 356 59.3
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 4.0e-108 396.0 302 63.2
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 1.5e-107 394.0 301 62.8
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 3.4e-107 392.9 309 61.5
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 6.4e-106 388.7 380 58.2
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 9.2e-105 384.8 218 81.7
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 1.7e-103 380.6 468 44.9
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 5.0e-103 379.0 268 67.5
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 7.3e-102 375.2 375 60.8
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 3.0e-95 353.2 307 57.0
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 2.1e-85 320.5 201 73.6
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 7.9e-72 275.4 208 63.5
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 7.9e-72 275.4 208 63.5
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 5.1e-71 272.7 265 49.1
Dinv28896 Davidia involucrata HOM05D006116 ORTHO05D007795 2.6e-67 260.4 200 67.5
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 7.6e-67 258.8 278 43.5
Atru.chr9.1147 Acer truncatum HOM05D006116 ORTHO05D007795 1.6e-56 224.6 118 85.6
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 2.1e-48 197.6 198 51.0
PSO732G0385 Papaver somniferum HOM05D006116 ORTHO05D007795 2.4e-44 184.1 271 47.2
Ca_20974_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 2.2e-37 161.0 117 66.7
Zm00001eb276710 Zea mays HOM05D006116 ORTHO05D007795 2.4e-36 157.5 134 57.5
TAR375G0859 Trochodendron aralioides HOM05D006116 ORTHO05D007795 2.3e-31 141.0 69 94.2
EL10Ac5g12217 Beta vulgaris HOM05D006116 ORTHO05D007795 2.0e-30 137.9 78 75.6
Lsat_1_v5_gn_7_9401 Lactuca sativa HOM05D006116 ORTHO05D000290 1.6e-27 128.3 101 59.4
DCAR_005654 Daucus carota HOM05D006116 ORTHO05D007795 3.7e-21 107.1 68 69.1
CAN.G507.3 Capsicum annuum HOM05D006116 ORTHO05D007795 3.1e-20 104.0 74 59.5
CDE11G0087 Ceratophyllum demersum HOM05D006116 ORTHO05D007795 8.5e-18 95.9 53 79.2
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 2.7e-16 90.9 76 57.9
CiPaw.12G058200 Carya illinoinensis HOM05D006116 ORTHO05D007795 1.2e-11 75.5 111 46.8
Aqoxy6G01690 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 1.5e-09 68.6 120 29.2
Atru.chr9.1146 Acer truncatum HOM05D006116 ORTHO05D007795 4.0e-07 60.5 118 36.4
Aqoxy7G03532 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 6.8e-07 59.7 59 40.7
BolC8t48435H Brassica oleracea HOM05D006116 ORTHO05D007795 2.6e-06 57.8 39 66.7


User provided reference genes

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