Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p005624 Quercus lobata HOM05D004120 ORTHO05D004951 6.6e-202 707.2 370 100.0
Cfa012429 Carpinus fangiana HOM05D004120 ORTHO05D004951 2.2e-157 559.3 375 78.1
CiPaw.11G092700 Carya illinoinensis HOM05D004120 ORTHO05D004951 2.7e-155 552.4 372 78.0
Eucgr.D02191 Eucalyptus grandis HOM05D004120 ORTHO05D004951 6.0e-155 551.2 335 84.8
GSVIVG01013166001 Vitis vinifera HOM05D004120 ORTHO05D004951 1.8e-154 549.7 339 84.7
CiPaw.12G063200 Carya illinoinensis HOM05D004120 ORTHO05D004951 6.7e-154 547.7 371 78.7
Hma1.2p1_0585F.1_g183700 Hydrangea macrophylla HOM05D004120 ORTHO05D004951 1.9e-153 546.2 359 78.0
Nn6g33597 Nelumbo nucifera HOM05D004120 ORTHO05D004951 1.9e-153 546.2 346 81.8
PGR031G2717 Punica granatum HOM05D004120 ORTHO05D004951 3.3e-153 545.4 345 82.0
arahy.Tifrunner.gnm1.ann1.482M5A Arachis hypogaea HOM05D004120 ORTHO05D004951 2.4e-151 539.3 352 79.3
arahy.Tifrunner.gnm1.ann1.G7H05W Arachis hypogaea HOM05D004120 ORTHO05D004951 2.4e-151 539.3 352 79.3
COL.COLO4_17048 Corchorus olitorius HOM05D004120 ORTHO05D004951 1.5e-150 536.6 298 89.6
TAR629G2715 Trochodendron aralioides HOM05D004120 ORTHO05D004951 1.5e-150 536.6 347 80.4
Sed0006792 Sechium edule HOM05D004120 ORTHO05D004951 5.8e-150 534.6 331 82.2
TWI81G0459 Tripterygium wilfordii HOM05D004120 ORTHO05D004951 5.8e-150 534.6 348 80.2
Dinv28953 Davidia involucrata HOM05D004120 ORTHO05D004951 1.0e-149 533.9 346 79.8
Ciclev10031866m.g Citrus clementina HOM05D004120 ORTHO05D004951 1.7e-149 533.1 300 88.7
Dinv25212 Davidia involucrata HOM05D004120 ORTHO05D004951 2.2e-149 532.7 346 83.2
Nn1g00518 Nelumbo nucifera HOM05D004120 ORTHO05D004951 2.2e-149 532.7 348 81.0
Phvul.002G007300 Phaseolus vulgaris HOM05D004120 ORTHO05D004951 2.2e-149 532.7 373 75.1
ClCG10G001730 Citrullus lanatus HOM05D004120 ORTHO05D004951 2.9e-149 532.3 342 80.4
Manes.17G013200 Manihot esculenta HOM05D004120 ORTHO05D004951 4.9e-149 531.6 345 80.6
CSS0046330 Camellia sinensis var. sinensis HOM05D004120 ORTHO05D004951 8.4e-149 530.8 333 84.7
Duzib084G1060 Durio zibethinus HOM05D004120 ORTHO05D004951 8.4e-149 530.8 298 88.3
VMungo1215G0016 Vigna mungo HOM05D004120 ORTHO05D004951 8.4e-149 530.8 373 75.3
MELO3C013859.2 Cucumis melo HOM05D004120 ORTHO05D004951 1.4e-148 530.0 343 79.6
CANSAT21G2618 Cannabis sativa HOM05D004120 ORTHO05D004951 5.5e-148 528.1 331 82.2
Glyma.11G043400 Glycine max HOM05D004120 ORTHO05D004951 5.5e-148 528.1 383 72.6
Thecc.03G228600 Theobroma cacao HOM05D004120 ORTHO05D004951 7.1e-148 527.7 298 87.9
CsaV3_3G001840 Cucumis sativus L. HOM05D004120 ORTHO05D004951 9.3e-148 527.3 343 79.3
MD00G1220600 Malus domestica HOM05D004120 ORTHO05D004951 1.6e-147 526.6 347 79.5
Gohir.D08G177300 Gossypium hirsutum HOM05D004120 ORTHO05D004951 6.0e-147 524.6 365 75.9
Potri.001G143400 Populus trichocarpa HOM05D004120 ORTHO05D004951 3.0e-146 522.3 347 78.1
Gohir.A08G156900 Gossypium hirsutum HOM05D004120 ORTHO05D004951 1.1e-145 520.4 365 75.3
Prupe.5G038500 Prunus persica HOM05D004120 ORTHO05D004951 1.1e-145 520.4 364 76.6
Cpa.g.sc239.7 Carica papaya HOM05D004120 ORTHO05D004951 2.5e-145 519.2 347 78.7
Lsat_1_v5_gn_6_79560 Lactuca sativa HOM05D004120 ORTHO05D004951 2.5e-145 519.2 334 79.6
Cc08_g02620 Coffea canephora HOM05D004120 ORTHO05D004951 5.7e-145 518.1 348 79.0
Ca_24652_v3 Cicer arietinum L. HOM05D004120 ORTHO05D004951 7.4e-145 517.7 350 77.4
Aqoxy3G02384 Aquilegia oxysepala HOM05D004120 ORTHO05D004951 1.3e-144 516.9 367 74.7
FAN04G1856 Fragaria x ananassa HOM05D004120 ORTHO05D004951 1.6e-144 516.5 362 76.5
FvH4_5g21880 Fragaria vesca HOM05D004120 ORTHO05D004951 2.1e-144 516.2 362 76.2
Gorai.004G185700 Gossypium raimondii HOM05D004120 ORTHO05D004951 3.7e-144 515.4 382 72.5
Lalb_Chr16g0379111 Lupinus albus HOM05D004120 ORTHO05D004951 3.7e-144 515.4 330 79.4
PGSC0003DMG402001159 Solanum tuberosum HOM05D004120 ORTHO05D004951 3.7e-144 515.4 369 74.0
FAN18G3415 Fragaria x ananassa HOM05D004120 ORTHO05D004951 4.8e-144 515.0 362 76.0
AUR62018721 Chenopodium quinoa HOM05D004120 ORTHO05D004951 8.2e-144 514.2 344 77.3
Sopen08g001030 Solanum pennellii HOM05D004120 ORTHO05D004951 8.2e-144 514.2 359 75.5
Lj2g0014948 Lotus japonicus HOM05D004120 ORTHO05D004951 1.1e-143 513.8 333 79.6
Lalb_Chr05g0213941 Lupinus albus HOM05D004120 ORTHO05D004951 1.4e-143 513.5 331 78.9
Hund14402 Selenicereus undatus HOM05D004120 ORTHO05D004951 1.8e-143 513.1 363 74.4
CAN.G1216.15 Capsicum annuum HOM05D004120 ORTHO05D004951 4.0e-143 511.9 298 85.9
Medtr5g014430 Medicago truncatula HOM05D004120 ORTHO05D004951 5.3e-143 511.5 355 77.2
DCAR_008274 Daucus carota HOM05D004120 ORTHO05D004951 6.9e-143 511.1 331 79.5
EL10Ac5g12129 Beta vulgaris HOM05D004120 ORTHO05D004951 1.2e-142 510.4 343 77.3
ECA240G4620 Erigeron canadensis HOM05D004120 ORTHO05D004951 2.6e-142 509.2 353 74.8
Oeu028027.1 Olea europaea HOM05D004120 ORTHO05D004951 2.6e-142 509.2 293 87.0
TPR.G7833 Trifolium pratense HOM05D004120 ORTHO05D004951 7.6e-142 507.7 354 76.8
Sabra01G0111800 Salix brachista HOM05D004120 ORTHO05D004951 5.0e-141 505.0 328 79.3
HanXRQChr03g0084021 Helianthus annuus HOM05D004120 ORTHO05D004951 6.5e-141 504.6 348 77.9
Rhsim11G0014500 Rhododendron simsii HOM05D004120 ORTHO05D004951 1.1e-140 503.8 331 79.2
Sc01g0007480 Simmondsia chinensis HOM05D004120 ORTHO05D004951 1.4e-140 503.4 333 77.8
RcHm_v2.0_Chr7g0209431 Rosa chinensis HOM05D004120 ORTHO05D004951 1.9e-140 503.1 365 75.3
MSTRG.13757 Avicennia marina HOM05D004120 ORTHO05D004951 2.5e-140 502.7 294 83.7
CDE03G0015 Ceratophyllum demersum HOM05D004120 ORTHO05D004951 1.6e-139 500.0 293 84.0
Oeu053047.1 Olea europaea HOM05D004120 ORTHO05D004951 6.1e-139 498.0 297 84.2
PSO063G1634 Papaver somniferum HOM05D004120 ORTHO05D004951 1.0e-138 497.3 297 84.2
PSO782G3668 Papaver somniferum HOM05D004120 ORTHO05D004951 2.3e-138 496.1 294 84.7
THA.LOC104807951 Tarenaya hassleriana HOM05D004120 ORTHO05D004951 2.3e-138 496.1 297 82.5
Thhalv10016805m.g Eutrema salsugineum HOM05D004120 ORTHO05D004951 1.9e-137 493.0 354 71.2
Sp4g17480 Schrenkiella parvula HOM05D004120 ORTHO05D004951 4.3e-137 491.9 367 72.8
AL4G31300 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 4.8e-136 488.4 368 70.4
BcaB02g09465 Brassica carinata HOM05D004120 ORTHO05D004951 8.2e-136 487.6 350 72.3
ATR0049G040 Amborella trichopoda HOM05D004120 ORTHO05D004951 1.4e-135 486.9 314 77.4
AT2G35260 Arabidopsis thaliana HOM05D004120 ORTHO05D004951 1.8e-135 486.5 368 70.9
A03p19500 Brassica napus HOM05D004120 ORTHO05D004951 5.3e-135 485.0 352 71.6
BraA03t11203Z Brassica rapa HOM05D004120 ORTHO05D004951 6.9e-135 484.6 298 80.5
BraA05t19989Z Brassica rapa HOM05D004120 ORTHO05D004951 6.9e-135 484.6 343 73.2
BcaC02g11630 Brassica carinata HOM05D004120 ORTHO05D004951 1.5e-134 483.4 341 73.3
C04p12920 Brassica napus HOM05D004120 ORTHO05D004951 1.5e-134 483.4 341 73.3
BcaC01g05734 Brassica carinata HOM05D004120 ORTHO05D004951 2.0e-134 483.0 367 68.4
Migut.E00930 Erythranthe guttata HOM05D004120 ORTHO05D004951 2.6e-134 482.6 292 82.9
A05p10510 Brassica napus HOM05D004120 ORTHO05D004951 3.4e-134 482.3 343 72.9
C03p22720 Brassica napus HOM05D004120 ORTHO05D004951 3.4e-134 482.3 332 74.1
BolC4t22936H Brassica oleracea HOM05D004120 ORTHO05D004951 3.4e-134 482.3 341 72.7
CARHR129420 Cardamine hirsuta HOM05D004120 ORTHO05D004951 4.5e-134 481.9 371 68.5
vmacro00332 Vaccinium macrocarpon HOM05D004120 ORTHO05D004951 7.7e-134 481.1 385 68.6
Ah.12g054990 Amaranthus hybridus HOM05D004120 ORTHO05D004951 1.7e-133 479.9 332 75.6
BolC3t14671H Brassica oleracea HOM05D004120 ORTHO05D004951 2.2e-133 479.6 367 68.1
Carub.0004s1696 Capsella rubella HOM05D004120 ORTHO05D004951 5.0e-133 478.4 350 70.6
unitig_699.g19781 Utricularia gibba HOM05D004120 ORTHO05D004951 5.0e-133 478.4 293 81.9
unitig_52.g17209 Utricularia gibba HOM05D004120 ORTHO05D004951 5.5e-132 474.9 295 81.0
AUR62007285 Chenopodium quinoa HOM05D004120 ORTHO05D004951 9.4e-132 474.2 331 75.2
THA.LOC104798329 Tarenaya hassleriana HOM05D004120 ORTHO05D004951 2.7e-131 472.6 296 78.7
Peaxi162Scf00045g00028 Petunia axillaris HOM05D004120 ORTHO05D004951 3.0e-130 469.2 298 80.5
HPP92_022143 Vanilla planifolia HOM05D004120 ORTHO05D004951 6.7e-130 468.0 275 82.5
HPP92_022140 Vanilla planifolia HOM05D004120 ORTHO05D004951 1.5e-129 466.8 275 82.2
Psat2g173200 Pisum sativum HOM05D004120 ORTHO05D004951 2.0e-129 466.5 351 71.5
ECA246G0968 Erigeron canadensis HOM05D004120 ORTHO05D004951 4.3e-129 465.3 319 74.6
Zm00001eb426630 Zea mays HOM05D004120 ORTHO05D004951 2.2e-128 463.0 280 79.6
Aa31LG6G560 Aethionema arabicum HOM05D004120 ORTHO05D004951 4.8e-128 461.8 283 79.9
Carub.0007s2352 Capsella rubella HOM05D004120 ORTHO05D004951 2.4e-127 459.5 296 75.7
Thhalv10025287m.g Eutrema salsugineum HOM05D004120 ORTHO05D004951 3.1e-127 459.1 296 76.0
Os03g0100030 Oryza sativa ssp. japonica HOM05D004120 ORTHO05D004951 5.3e-127 458.4 275 80.0
CARHR224560 Cardamine hirsuta HOM05D004120 ORTHO05D004951 6.9e-127 458.0 283 78.1
AL716U10010 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 1.2e-126 457.2 368 67.4
Sp7g16270 Schrenkiella parvula HOM05D004120 ORTHO05D004951 1.5e-126 456.8 283 77.7
Glyma.01G198500 Glycine max HOM05D004120 ORTHO05D004951 2.6e-126 456.1 341 70.7
SGA_v2.0_scaffold54G19447 Striga asiatica HOM05D004120 ORTHO05D004951 4.5e-126 455.3 354 66.4
C07p49190 Brassica napus HOM05D004120 ORTHO05D004951 1.0e-125 454.1 298 75.2
AT4G17840 Arabidopsis thaliana HOM05D004120 ORTHO05D004951 3.8e-125 452.2 283 77.0
AL7G36690 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 5.0e-125 451.8 283 77.0
BcaNung00052 Brassica carinata HOM05D004120 ORTHO05D004951 8.5e-125 451.1 274 79.9
A03p50800 Brassica napus HOM05D004120 ORTHO05D004951 1.4e-124 450.3 280 78.2
BraA03t14169Z Brassica rapa HOM05D004120 ORTHO05D004951 1.4e-124 450.3 280 78.2
BraA01t00933Z Brassica rapa HOM05D004120 ORTHO05D004951 2.5e-124 449.5 365 65.5
BcaC09g51598 Brassica carinata HOM05D004120 ORTHO05D004951 3.2e-124 449.1 365 65.5
BolC1t01127H Brassica oleracea HOM05D004120 ORTHO05D004951 3.2e-124 449.1 365 65.5
C01p11590 Brassica napus HOM05D004120 ORTHO05D004951 4.2e-124 448.7 365 65.2
A01p09890 Brassica napus HOM05D004120 ORTHO05D004951 5.5e-124 448.4 362 65.7
Aa31LG9G15290 Aethionema arabicum HOM05D004120 ORTHO05D004951 1.1e-121 440.7 344 67.4
Solyc08g005010.4 Solanum lycopersicum HOM05D004120 ORTHO05D004951 4.8e-120 435.3 315 74.3
Atru.chr6.1717 Acer truncatum HOM05D004120 ORTHO05D004951 5.2e-114 415.2 283 77.4
BolC7t45429H Brassica oleracea HOM05D004120 ORTHO05D004951 1.7e-112 410.2 265 77.4
MD06G1033000 Malus domestica HOM05D004120 ORTHO05D004951 9.1e-111 404.4 269 78.4
Haze_08240 Corylus avellana HOM05D004120 ORTHO05D004951 1.2e-110 404.1 333 67.9
SEGI_24472 Sequoiadendron giganteum HOM05D004120 ORTHO05D004951 3.2e-108 396.0 288 68.8
Duzib205G1837 Durio zibethinus HOM05D004120 ORTHO05D004951 2.6e-105 386.3 221 88.7
Nitab4.5_0000804g0170 Nicotiana tabacum HOM05D004120 ORTHO05D004951 4.1e-103 379.0 211 89.6
Actinidia28172 Actinidia chinensis HOM05D004120 ORTHO05D004951 2.9e-93 346.3 190 92.1
FAN08G2335 Fragaria x ananassa HOM05D004120 ORTHO05D004951 2.1e-91 340.1 268 71.6
FAN13G1981 Fragaria x ananassa HOM05D004120 ORTHO05D004951 3.6e-91 339.3 267 71.2
Pp3c10_10980 Physcomitrium patens HOM05D004120 ORTHO05D004951 1.4e-87 327.4 270 60.0
Mapoly0008s0099 Marchantia polymorpha HOM05D004120 ORTHO05D004951 1.8e-87 327.0 340 50.0
Pp3c14_25270 Physcomitrium patens HOM05D004120 ORTHO05D004951 7.0e-87 325.1 273 59.3
unitig_744.g24311 Utricularia gibba HOM05D004120 ORTHO05D004951 2.3e-85 320.1 233 70.8
Nitab4.5_0002539g0020 Nicotiana tabacum HOM05D004120 ORTHO05D004951 1.6e-78 297.4 284 62.7
Actinidia25961 Actinidia chinensis HOM05D004120 ORTHO05D004951 2.0e-73 280.4 232 67.7
CDE06G0385 Ceratophyllum demersum HOM05D004120 ORTHO05D004951 1.2e-70 271.2 243 61.7
SMO356G0344 Selaginella moellendorffii HOM05D004120 ORTHO05D004951 2.7e-70 270.0 255 51.8
arahy.Tifrunner.gnm1.ann1.K2V32T Arachis hypogaea HOM05D004120 ORTHO05D004951 6.4e-64 248.8 172 74.4
arahy.Tifrunner.gnm1.ann1.7CR4HZ Arachis hypogaea HOM05D004120 ORTHO05D004951 1.9e-63 247.3 172 74.4
arahy.Tifrunner.gnm1.ann1.WRTU1C Arachis hypogaea HOM05D004120 ORTHO05D004951 4.6e-62 242.7 172 73.3
arahy.Tifrunner.gnm1.ann1.3C7WBJ Arachis hypogaea HOM05D004120 ORTHO05D004951 5.1e-61 239.2 128 92.2
HanXRQChr05g0153901 Helianthus annuus HOM05D004120 ORTHO05D004951 1.9e-60 237.3 162 78.4
arahy.Tifrunner.gnm1.ann1.B3D4NA Arachis hypogaea HOM05D004120 ORTHO05D004951 7.4e-44 182.2 108 83.3
arahy.Tifrunner.gnm1.ann1.4R7L3N Arachis hypogaea HOM05D004120 ORTHO05D004951 2.8e-43 180.3 96 90.6
arahy.Tifrunner.gnm1.ann1.AE9Z3E Arachis hypogaea HOM05D004120 ORTHO05D004951 2.8e-43 180.3 109 81.7
AagrBONN_evm.TU.Sc2ySwM_117.2801 Anthoceros agrestis HOM05D010715 ORTHO05D004951 6.4e-40 169.1 157 54.8
arahy.Tifrunner.gnm1.ann1.RCE8PR Arachis hypogaea HOM05D004120 ORTHO05D004951 2.5e-36 157.1 131 65.6
arahy.Tifrunner.gnm1.ann1.E125G1 Arachis hypogaea HOM05D004120 ORTHO05D004951 1.7e-32 144.4 70 97.1
arahy.Tifrunner.gnm1.ann1.BQ9W36 Arachis hypogaea HOM05D004120 ORTHO05D004951 1.1e-31 141.7 70 94.3
arahy.Tifrunner.gnm1.ann1.U1DJ88 Arachis hypogaea HOM05D004120 ORTHO05D007788 3.2e-31 140.2 73 93.2
Aa31sc618G30 Aethionema arabicum HOM05D004120 ORTHO05D004951 1.9e-28 131.0 102 67.6
arahy.Tifrunner.gnm1.ann1.L0EJKI Arachis hypogaea HOM05D004120 ORTHO05D004951 3.7e-27 126.7 62 91.9
CBR_g56906 Chara braunii HOM05D004120 ORTHO05D004951 2.4e-26 124.0 114 48.2
arahy.Tifrunner.gnm1.ann1.H82JQN Arachis hypogaea HOM05D004120 ORTHO05D021518 2.6e-25 120.6 88 68.2
AagrBONN_evm.TU.Sc2ySwM_117.3803 Anthoceros agrestis HOM05D004120 ORTHO05D004951 3.8e-24 116.7 102 53.9
RcHm_v2.0_Chr6g0284251 Rosa chinensis HOM05D004120 ORTHO05D004951 1.0e-21 108.6 73 74.0
arahy.Tifrunner.gnm1.ann1.JI8VIY Arachis hypogaea HOM05D004120 ORTHO05D021518 4.3e-20 103.2 57 89.5
EL10Ac1g01819 Beta vulgaris HOM05D004120 ORTHO05D023811 5.7e-20 102.8 69 76.8
arahy.Tifrunner.gnm1.ann1.NR0HVE Arachis hypogaea HOM05D004120 ORTHO05D021518 1.4e-18 98.2 57 87.7
CBR_g19263 Chara braunii HOM05D004120 ORTHO05D004951 2.4e-18 97.4 140 38.6
AUR62039713 Chenopodium quinoa HOM05D004317 ORTHO05D005031 2.2e-16 90.9 54 81.5
CAN.G399.4 Capsicum annuum HOM05D004120 ORTHO05D004951 1.2e-14 85.1 55 78.2
CAN.G36.13 Capsicum annuum HOM05D004120 ORTHO05D004951 2.3e-13 80.9 53 69.8
Aa31sc185G30 Aethionema arabicum HOM05D004120 ORTHO05D004951 2.5e-07 60.8 40 70.0


User provided reference genes

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