Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p004656 Quercus lobata HOM05D000107 ORTHO05D003213 1.8e-116 422.5 209 100.0
Rhsim04G0055300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.6e-16 90.5 153 30.7
Rhsim01G0178900 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.8e-16 89.0 153 30.1
QL07p012857 Quercus lobata HOM05D000107 ORTHO05D000062 6.9e-15 85.1 159 32.7
QL02p079634 Quercus lobata HOM05D000107 ORTHO05D000062 3.2e-12 76.3 121 36.4
QL09p027832 Quercus lobata HOM05D000107 ORTHO05D000062 1.2e-11 74.3 158 29.7
Atru.chr3.2737 Acer truncatum HOM05D000107 ORTHO05D000062 1.8e-10 70.5 152 30.3
Atru.chr10.32 Acer truncatum HOM05D000107 ORTHO05D000062 3.0e-10 69.7 152 30.3
AUR62044437 Chenopodium quinoa HOM05D000107 ORTHO05D000568 3.0e-10 69.7 147 27.9
Atru.chr11.301 Acer truncatum HOM05D000107 ORTHO05D000062 6.7e-10 68.6 160 30.0
Rhsim08G0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.7e-10 68.2 153 32.7
Rhsim02G0220700 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.9e-09 67.0 153 32.0
Rhsim06G0085100 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.9e-09 67.0 153 32.0
Os07g0516500 Oryza sativa ssp. japonica HOM05D032447 ORTHO05D003213 2.5e-09 66.6 150 31.3
COL.COLO4_28724 Corchorus olitorius HOM05D000107 ORTHO05D003213 7.4e-09 65.1 81 38.3
Rhsim01G0081600 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.4e-09 65.1 121 34.7
QL08p058184 Quercus lobata HOM05D000107 ORTHO05D003213 9.7e-09 64.7 104 37.5
CSS0035542 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.3e-08 64.3 167 28.7
QL04p020321 Quercus lobata HOM05D000315 ORTHO05D000062 1.3e-08 64.3 158 28.5
Rhsim01G0072500 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.6e-08 63.9 150 28.0
ECA236G3668 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.2e-08 63.5 83 32.5
CSS0006285 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.7e-08 62.8 154 30.5
CSS0013019 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.7e-08 62.8 154 30.5
CSS0020176 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.7e-08 62.8 154 30.5
CSS0022844 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.7e-08 62.8 154 30.5
CSS0033153 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.7e-08 62.8 154 30.5
CSS0034159 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.7e-08 62.8 154 30.5
CSS0036792 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.7e-08 62.8 154 30.5
CSS0043987 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.7e-08 62.8 154 30.5
CSS0020537 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.8e-08 62.4 154 30.5
CSS0038506 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.8e-08 62.4 154 30.5
Ca_20464_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000568 4.8e-08 62.4 161 29.2
AUR62015626 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.1e-07 61.2 127 30.7
Peaxi162Scf00479g00422 Petunia axillaris HOM05D000107 ORTHO05D000062 1.1e-07 61.2 80 37.5
VMungo0331G0361 Vigna mungo HOM05D000107 ORTHO05D003213 1.1e-07 61.2 75 34.7
AUR62015284 Chenopodium quinoa HOM05D000107 ORTHO05D003213 1.4e-07 60.8 99 37.4
Ca_12335_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000110 1.4e-07 60.8 161 28.6
CANSAT35G1642 Cannabis sativa HOM05D000107 ORTHO05D000062 1.8e-07 60.5 150 26.7
RhsimUnG0068500 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.8e-07 60.5 66 43.9
CANSAT64G0367 Cannabis sativa HOM05D000107 ORTHO05D000062 2.4e-07 60.1 69 36.2
Ca_12327_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 3.1e-07 59.7 161 27.3
Atru.chr3.1417 Acer truncatum HOM05D000107 ORTHO05D000062 5.3e-07 58.9 150 24.7
Ah.05g172280 Amaranthus hybridus HOM05D000107 ORTHO05D003213 5.3e-07 58.9 154 28.6
CANSAT64G1192 Cannabis sativa HOM05D000107 ORTHO05D000062 5.3e-07 58.9 80 33.8
CANSAT64G1316 Cannabis sativa HOM05D000107 ORTHO05D000062 5.3e-07 58.9 77 36.4
Sopen03g018530 Solanum pennellii HOM05D000004 ORTHO05D009932 5.3e-07 58.9 152 29.6
Sopen04g011400 Solanum pennellii HOM05D000107 ORTHO05D000062 5.3e-07 58.9 152 30.9
Sopen07g016840 Solanum pennellii HOM05D000107 ORTHO05D000062 6.9e-07 58.5 152 30.9
Lj1g0007648 Lotus japonicus HOM05D000107 ORTHO05D003213 9.0e-07 58.2 154 30.5
PSO566G0169 Papaver somniferum HOM05D000107 ORTHO05D000062 9.0e-07 58.2 159 30.2
Ah.01g007820 Amaranthus hybridus HOM05D000107 ORTHO05D003213 1.2e-06 57.8 102 34.3
EL10Ac1g02060 Beta vulgaris HOM05D001385 ORTHO05D008760 1.2e-06 57.8 61 37.7
EL10Ac2g03739 Beta vulgaris HOM05D000107 ORTHO05D003213 1.5e-06 57.4 61 37.7
EL10Ac6g13764 Beta vulgaris HOM05D009516 ORTHO05D010476 1.5e-06 57.4 105 32.4
FvH4_1g28182 Fragaria vesca HOM05D000107 ORTHO05D000062 1.5e-06 57.4 66 39.4
Oeu062448.1 Olea europaea HOM05D000107 ORTHO05D003213 1.5e-06 57.4 64 39.1
FvH4_4g09831 Fragaria vesca HOM05D000107 ORTHO05D002484 2.0e-06 57.0 66 37.9
Sc03g0003530 Simmondsia chinensis HOM05D009516 ORTHO05D010476 2.0e-06 57.0 108 34.3
Sopen10g014350 Solanum pennellii HOM05D000107 ORTHO05D000062 2.0e-06 57.0 152 30.9
EL10Ac8g19069 Beta vulgaris HOM05D000107 ORTHO05D003213 2.6e-06 56.6 93 34.4
AUR62032223 Chenopodium quinoa HOM05D008576 ORTHO05D003213 2.6e-06 56.6 62 38.7
PGSC0003DMG400043749 Solanum tuberosum HOM05D000107 ORTHO05D014265 2.6e-06 56.6 73 39.7
PSO017G0673 Papaver somniferum HOM05D000107 ORTHO05D000062 3.4e-06 56.2 159 30.2
Sopen10g018620 Solanum pennellii HOM05D000107 ORTHO05D000062 3.4e-06 56.2 152 30.9
Sopen02g004720 Solanum pennellii HOM05D000107 ORTHO05D000062 4.5e-06 55.8 152 30.9
Ah.06g185260 Amaranthus hybridus HOM05D000107 ORTHO05D000062 5.9e-06 55.5 105 30.5
FvH4_1g29801 Fragaria vesca HOM05D000107 ORTHO05D000062 5.9e-06 55.5 162 27.2
PSO170G5555 Papaver somniferum HOM05D000107 ORTHO05D000062 5.9e-06 55.5 70 34.3
Rhsim13G0141700 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.9e-06 55.5 155 27.7
Ah.14g078910 Amaranthus hybridus HOM05D000107 ORTHO05D000062 7.7e-06 55.1 101 31.7
FvH4_6g31292 Fragaria vesca HOM05D000107 ORTHO05D000062 7.7e-06 55.1 86 32.6
Oeu030830.1 Olea europaea HOM05D000107 ORTHO05D003213 7.7e-06 55.1 64 37.5
TAR110G0001 Trochodendron aralioides HOM05D000107 ORTHO05D003213 7.7e-06 55.1 118 31.4
CANSAT01G1821 Cannabis sativa HOM05D000107 ORTHO05D000062 1.0e-05 54.7 150 26.0
ECA246G3717 Erigeron canadensis HOM05D000107 ORTHO05D000568 1.0e-05 54.7 92 28.3
Hma1.2p1_0119F.1_g056730 Hydrangea macrophylla HOM05D000107 ORTHO05D000062 1.0e-05 54.7 109 31.2
Rhsim10G0157200 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.0e-05 54.7 150 27.3
SHI37286 Sapria himalayana HOM05D000648 ORTHO05D000568 1.0e-05 54.7 68 36.8
SHI46859 Sapria himalayana HOM05D000107 ORTHO05D000062 1.0e-05 54.7 103 31.1


User provided reference genes

Program Settings