Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p003340 Quercus lobata HOM05D006619 ORTHO05D008351 2.1e-118 429.1 225 100.0
Prupe.5G014600 Prunus persica HOM05D006619 ORTHO05D008351 1.9e-47 193.4 173 63.0
Cfa012616 Carpinus fangiana HOM05D006619 ORTHO05D008351 4.3e-47 192.2 187 59.9
CiPaw.11G070000 Carya illinoinensis HOM05D006619 ORTHO05D008351 2.1e-46 189.9 146 71.9
Dinv09413 Davidia involucrata HOM05D006619 ORTHO05D008351 1.5e-44 183.7 175 57.7
MD06G1011900 Malus domestica HOM05D006619 ORTHO05D008351 1.5e-44 183.7 141 68.8
RcHm_v2.0_Chr7g0215151 Rosa chinensis HOM05D006619 ORTHO05D008351 2.0e-44 183.3 171 59.1
FAN18G2839 Fragaria x ananassa HOM05D006619 ORTHO05D008351 1.7e-43 180.3 171 58.5
FvH4_5g24810 Fragaria vesca HOM05D006619 ORTHO05D008351 6.5e-43 178.3 171 57.9
FAN08G1468 Fragaria x ananassa HOM05D006619 ORTHO05D008351 8.4e-43 177.9 171 57.3
FAN04G1190 Fragaria x ananassa HOM05D006619 ORTHO05D008351 2.5e-42 176.4 171 57.3
FAN13G0980 Fragaria x ananassa HOM05D006619 ORTHO05D008351 6.7e-40 168.3 150 62.0
Thecc.03G321400 Theobroma cacao HOM05D006619 ORTHO05D008351 7.4e-39 164.9 179 52.0
TAR629G0027 Trochodendron aralioides HOM05D006619 ORTHO05D008351 1.3e-38 164.1 174 52.9
Duzib205G1329 Durio zibethinus HOM05D006619 ORTHO05D008351 1.1e-37 161.0 179 53.6
Lj2g0025157 Lotus japonicus HOM05D006619 ORTHO05D008351 6.9e-37 158.3 141 61.0
Rhsim07G0140900 Rhododendron simsii HOM05D006619 ORTHO05D008351 1.2e-36 157.5 181 49.2
Glyma.09G217700 Glycine max HOM05D006619 ORTHO05D008351 2.6e-36 156.4 141 59.6
TWI60G1390 Tripterygium wilfordii HOM05D006619 ORTHO05D008351 2.6e-36 156.4 150 57.3
Peaxi162Scf00014g02116 Petunia axillaris HOM05D006619 ORTHO05D008351 3.2e-34 149.4 141 51.8
Actinidia18172 Actinidia chinensis HOM05D006619 ORTHO05D008351 7.2e-34 148.3 219 40.6
Lalb_Chr16g0380481 Lupinus albus HOM05D006619 ORTHO05D008351 1.2e-33 147.5 139 58.3
Phvul.002G123000 Phaseolus vulgaris HOM05D006619 ORTHO05D008351 2.7e-33 146.4 141 57.4
Duzib084G0833 Durio zibethinus HOM05D006619 ORTHO05D008351 4.6e-33 145.6 167 49.1
COL.COLO4_16736 Corchorus olitorius HOM05D006619 ORTHO05D008351 1.8e-32 143.7 179 45.8
Nitab4.5_0000236g0060 Nicotiana tabacum HOM05D006619 ORTHO05D008351 5.1e-32 142.1 166 45.8
Medtr5g025800 Medicago truncatula HOM05D006619 ORTHO05D008351 8.7e-32 141.4 141 56.0
Glyma.01G152500 Glycine max HOM05D006619 ORTHO05D008351 1.1e-31 141.0 159 51.6
Nitab4.5_0000975g0010 Nicotiana tabacum HOM05D006619 ORTHO05D008351 1.1e-31 141.0 215 38.6
Solyc08g075150.3 Solanum lycopersicum HOM05D006619 ORTHO05D008351 4.3e-31 139.0 141 48.9
PGSC0003DMG400020810 Solanum tuberosum HOM05D006619 ORTHO05D008351 7.4e-31 138.3 141 48.9
Cc08_g06080 Coffea canephora HOM05D006619 ORTHO05D008351 1.6e-30 137.1 171 43.9
Sopen08g023780 Solanum pennellii HOM05D006619 ORTHO05D008351 2.2e-30 136.7 141 48.2
Lalb_Chr05g0215221 Lupinus albus HOM05D006619 ORTHO05D008351 2.8e-30 136.3 139 55.4
VMungo1215G3049 Vigna mungo HOM05D006619 ORTHO05D008351 4.8e-30 135.6 141 51.8
Aqoxy3G01986 Aquilegia oxysepala HOM05D006619 ORTHO05D008351 8.2e-30 134.8 161 48.4
TPR.G7876 Trifolium pratense HOM05D006619 ORTHO05D008351 1.4e-29 134.0 141 54.6
Ciclev10001580m.g Citrus clementina HOM05D006619 ORTHO05D008351 3.1e-29 132.9 184 45.1
Eucgr.D02571 Eucalyptus grandis HOM05D006619 ORTHO05D008351 3.1e-29 132.9 121 57.0
Dinv37439 Davidia involucrata HOM05D006619 ORTHO05D008351 6.9e-29 131.7 135 51.1
Psat0s808g0080 Pisum sativum HOM05D006619 ORTHO05D008351 3.4e-28 129.4 141 49.6
GSVIVG01036901001 Vitis vinifera HOM05D006619 ORTHO05D008351 5.9e-28 128.6 101 66.3
Ca_25054_v3 Cicer arietinum L. HOM05D006619 ORTHO05D008351 7.7e-28 128.3 139 52.5
ClCG11G016190 Citrullus lanatus HOM05D006619 ORTHO05D008351 2.9e-27 126.3 221 37.1
Manes.17G002400 Manihot esculenta HOM05D006619 ORTHO05D008351 1.4e-26 124.0 137 48.9
PSO170G1900 Papaver somniferum HOM05D006619 ORTHO05D008351 1.9e-26 123.6 149 47.7
Lj8A366T23 Lonicera japonica HOM05D006619 ORTHO05D008351 4.2e-26 122.5 101 64.4
PSO017G2194 Papaver somniferum HOM05D006619 ORTHO05D008351 4.2e-26 122.5 149 47.7
Migut.E01382 Erythranthe guttata HOM05D006619 ORTHO05D008351 9.4e-26 121.3 136 46.3
DCAR_004540 Daucus carota HOM05D006619 ORTHO05D008351 1.2e-25 120.9 151 46.4
HanXRQChr06g0173221 Helianthus annuus HOM05D006619 ORTHO05D008351 1.6e-25 120.6 162 40.1
Gohir.D08G169400 Gossypium hirsutum HOM05D006619 ORTHO05D008351 1.8e-24 117.1 106 53.8
Gorai.004G176600 Gossypium raimondii HOM05D006619 ORTHO05D008351 1.8e-24 117.1 106 53.8
Sabra01G0179200 Salix brachista HOM05D006619 ORTHO05D008351 3.0e-24 116.3 143 47.6
Gohir.A08G148300 Gossypium hirsutum HOM05D006619 ORTHO05D008351 1.1e-23 114.4 106 52.8
Lsat_1_v5_gn_3_19920 Lactuca sativa HOM05D006619 ORTHO05D008351 1.1e-23 114.4 136 46.3
PGR031G2471 Punica granatum HOM05D006619 ORTHO05D008351 1.1e-23 114.4 134 46.3
CDE01G0342 Ceratophyllum demersum HOM05D006619 ORTHO05D008351 1.5e-23 114.0 131 44.3
Atru.chr6.2146 Acer truncatum HOM05D006619 ORTHO05D008351 2.4e-21 106.7 118 48.3
ECA246G4124 Erigeron canadensis HOM05D006619 ORTHO05D008351 6.9e-21 105.1 139 43.2
Sc07g0008130 Simmondsia chinensis HOM05D006619 ORTHO05D008351 5.9e-20 102.1 121 46.3
arahy.Tifrunner.gnm1.ann1.7E2RQS Arachis hypogaea HOM05D006619 ORTHO05D008351 1.4e-18 97.4 132 45.5
arahy.Tifrunner.gnm1.ann1.TY5C82 Arachis hypogaea HOM05D006619 ORTHO05D008351 1.4e-18 97.4 132 45.5
AUR62010492 Chenopodium quinoa HOM05D006619 ORTHO05D008351 1.4e-18 97.4 121 44.6
ATR0568G188 Amborella trichopoda HOM05D006619 ORTHO05D008351 2.5e-18 96.7 135 44.4
AUR62017411 Chenopodium quinoa HOM05D006619 ORTHO05D008351 2.1e-17 93.6 129 40.3
Hund28917 Selenicereus undatus HOM05D006619 ORTHO05D008351 2.7e-17 93.2 112 46.4
Hund28918 Selenicereus undatus HOM05D006619 ORTHO05D008351 2.7e-17 93.2 112 46.4
SGA_v2.0_scaffold121G33054 Striga asiatica HOM05D006619 ORTHO05D008351 4.7e-17 92.4 141 37.6
SHI32758 Sapria himalayana HOM05D006619 ORTHO05D008351 1.8e-16 90.5 167 36.5
Ah.12g058350 Amaranthus hybridus HOM05D006619 ORTHO05D008351 3.9e-16 89.4 113 44.2
THA.LOC104811203 Tarenaya hassleriana HOM05D006619 ORTHO05D008351 1.1e-15 87.8 195 31.8
Haze_08039 Corylus avellana HOM05D006619 ORTHO05D008351 1.7e-14 84.0 56 76.8
Haze_08049 Corylus avellana HOM05D006619 ORTHO05D008351 1.7e-14 84.0 56 76.8
CsaV3_4G014810 Cucumis sativus L. HOM05D006619 ORTHO05D008351 2.8e-14 83.2 162 38.3
COL.COLO4_16514 Corchorus olitorius HOM05D006619 ORTHO05D008351 8.2e-14 81.6 85 47.1
MELO3C010535.2 Cucumis melo HOM05D006619 ORTHO05D008351 8.2e-14 81.6 164 38.4
Nn1g09286 Nelumbo nucifera HOM05D006619 ORTHO05D008351 1.4e-13 80.9 80 52.5
SalBow1G1985 Salvia bowleyana HOM05D006619 ORTHO05D008351 1.4e-13 80.9 103 42.7
SalBow8G3333 Salvia bowleyana HOM05D006619 ORTHO05D008351 1.4e-13 80.9 103 42.7
Sp2g10250 Schrenkiella parvula HOM05D006619 ORTHO05D008351 1.3e-11 74.3 124 36.3
CANSAT35G0271 Cannabis sativa HOM05D006619 ORTHO05D008351 1.1e-10 71.2 173 34.7
Os01g0962100 Oryza sativa ssp. japonica HOM05D006619 ORTHO05D008351 3.2e-10 69.7 153 33.3
CSS0018284 Camellia sinensis var. sinensis HOM05D006619 ORTHO05D008351 4.2e-10 69.3 61 55.7
Hund14312 Selenicereus undatus HOM05D006619 ORTHO05D008351 9.4e-10 68.2 88 47.7
EL10Ac5g12595 Beta vulgaris HOM05D006619 ORTHO05D008351 1.2e-09 67.8 63 57.1
Thhalv10001132m.g Eutrema salsugineum HOM05D006619 ORTHO05D008351 1.6e-09 67.4 128 33.6
BcaB07g30899 Brassica carinata HOM05D006619 ORTHO05D008351 4.7e-09 65.9 128 34.4
AT5G45310 Arabidopsis thaliana HOM05D006619 ORTHO05D008351 1.0e-08 64.7 123 31.7
Sed0005654 Sechium edule HOM05D006619 ORTHO05D008351 3.0e-08 63.2 92 41.3
CARHR176830 Cardamine hirsuta HOM05D006619 ORTHO05D008351 4.0e-08 62.8 119 32.8
Sed0000478 Sechium edule HOM05D006619 ORTHO05D008351 1.1e-07 61.2 149 35.6
BcaC04g21786 Brassica carinata HOM05D006619 ORTHO05D008351 1.5e-07 60.8 124 33.1
C09p27640 Brassica napus HOM05D006619 ORTHO05D008351 1.5e-07 60.8 124 33.1
BolC9t55627H Brassica oleracea HOM05D006619 ORTHO05D008351 1.5e-07 60.8 124 33.1
EL10Ac5g12596 Beta vulgaris HOM05D006619 ORTHO05D008351 2.0e-07 60.5 88 43.2
Aa31LG9G7710 Aethionema arabicum HOM05D006619 ORTHO05D008351 3.3e-07 59.7 119 31.9
Cpa.g.sc137.4 Carica papaya HOM05D006619 ORTHO05D008351 4.4e-07 59.3 90 38.9
Potri.004G234300 Populus trichocarpa HOM05D006619 ORTHO05D008351 7.5e-07 58.5 53 58.5
BraA09t37763Z Brassica rapa HOM05D006619 ORTHO05D008351 2.2e-06 57.0 124 30.6
AL8G13490 Arabidopsis lyrata HOM05D006619 ORTHO05D008351 2.8e-06 56.6 122 30.3
A09p21640 Brassica napus HOM05D006619 ORTHO05D008351 4.8e-06 55.8 123 30.9


User provided reference genes

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