Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p003333 Quercus lobata HOM05D006619 ORTHO05D008351 2.4e-145 518.8 263 100.0
CiPaw.11G070000 Carya illinoinensis HOM05D006619 ORTHO05D008351 2.6e-67 259.6 199 70.9
Cfa012616 Carpinus fangiana HOM05D006619 ORTHO05D008351 9.8e-67 257.7 197 72.6
Haze_08039 Corylus avellana HOM05D006619 ORTHO05D008351 1.1e-65 254.2 197 71.1
Haze_08049 Corylus avellana HOM05D006619 ORTHO05D008351 1.4e-65 253.8 197 71.1
Dinv37439 Davidia involucrata HOM05D006619 ORTHO05D008351 3.5e-64 249.2 205 65.9
Prupe.5G014600 Prunus persica HOM05D006619 ORTHO05D008351 2.5e-62 243.0 212 63.7
GSVIVG01036901001 Vitis vinifera HOM05D006619 ORTHO05D008351 4.7e-61 238.8 205 63.9
Atru.chr6.2146 Acer truncatum HOM05D006619 ORTHO05D008351 9.8e-59 231.1 205 62.4
RcHm_v2.0_Chr7g0215151 Rosa chinensis HOM05D006619 ORTHO05D008351 7.0e-57 224.9 201 62.2
FvH4_5g24810 Fragaria vesca HOM05D006619 ORTHO05D008351 6.0e-56 221.9 212 59.4
FAN18G2839 Fragaria x ananassa HOM05D006619 ORTHO05D008351 1.0e-55 221.1 212 59.4
FAN04G1190 Fragaria x ananassa HOM05D006619 ORTHO05D008351 1.7e-55 220.3 212 59.4
TAR629G0027 Trochodendron aralioides HOM05D006619 ORTHO05D008351 5.0e-55 218.8 210 63.3
Glyma.01G152500 Glycine max HOM05D006619 ORTHO05D008351 8.6e-55 218.0 197 63.5
CSS0018284 Camellia sinensis var. sinensis HOM05D006619 ORTHO05D008351 1.1e-54 217.6 198 62.6
FAN08G1468 Fragaria x ananassa HOM05D006619 ORTHO05D008351 1.1e-54 217.6 204 60.8
Rhsim07G0140900 Rhododendron simsii HOM05D006619 ORTHO05D008351 1.5e-54 217.2 207 58.5
Glyma.09G217700 Glycine max HOM05D006619 ORTHO05D008351 3.3e-54 216.1 197 61.9
Lalb_Chr16g0380481 Lupinus albus HOM05D006619 ORTHO05D008351 7.3e-54 214.9 204 57.8
Duzib084G0833 Durio zibethinus HOM05D006619 ORTHO05D008351 1.2e-53 214.2 210 60.0
Potri.004G234300 Populus trichocarpa HOM05D006619 ORTHO05D008351 1.6e-53 213.8 205 60.5
Thecc.03G321400 Theobroma cacao HOM05D006619 ORTHO05D008351 1.6e-53 213.8 206 58.7
Gorai.004G176600 Gossypium raimondii HOM05D006619 ORTHO05D008351 2.1e-53 213.4 205 60.5
Gohir.D08G169400 Gossypium hirsutum HOM05D006619 ORTHO05D008351 2.8e-53 213.0 205 60.5
Sabra01G0179200 Salix brachista HOM05D006619 ORTHO05D008351 8.0e-53 211.5 205 60.0
FAN13G0980 Fragaria x ananassa HOM05D006619 ORTHO05D008351 1.1e-52 211.1 212 58.5
Gohir.A08G148300 Gossypium hirsutum HOM05D006619 ORTHO05D008351 1.1e-52 211.1 205 59.5
MD06G1011900 Malus domestica HOM05D006619 ORTHO05D008351 1.8e-52 210.3 212 58.0
COL.COLO4_16736 Corchorus olitorius HOM05D006619 ORTHO05D008351 8.9e-52 208.0 207 58.9
Actinidia18172 Actinidia chinensis HOM05D006619 ORTHO05D008351 1.2e-51 207.6 207 56.5
Eucgr.D02571 Eucalyptus grandis HOM05D006619 ORTHO05D008351 1.2e-51 207.6 194 57.7
Manes.15G190475 Manihot esculenta HOM05D006619 ORTHO05D008351 9.8e-51 204.5 205 56.1
Medtr5g025800 Medicago truncatula HOM05D006619 ORTHO05D008351 4.9e-50 202.2 204 57.8
Psat0s808g0080 Pisum sativum HOM05D006619 ORTHO05D008351 4.9e-50 202.2 202 58.9
Lj2g0025157 Lotus japonicus HOM05D006619 ORTHO05D008351 1.1e-49 201.1 203 59.6
Ciclev10001580m.g Citrus clementina HOM05D006619 ORTHO05D008351 1.9e-49 200.3 198 59.1
TPR.G7876 Trifolium pratense HOM05D006619 ORTHO05D008351 1.9e-49 200.3 203 56.7
Lalb_Chr05g0215221 Lupinus albus HOM05D006619 ORTHO05D008351 3.2e-49 199.5 204 57.8
Nn1g09329 Nelumbo nucifera HOM05D006619 ORTHO05D008351 1.2e-48 197.6 202 57.9
Dinv09413 Davidia involucrata HOM05D006619 ORTHO05D008351 1.3e-47 194.1 168 64.9
TWI60G1390 Tripterygium wilfordii HOM05D006619 ORTHO05D008351 2.3e-47 193.4 205 57.1
Manes.17G002400 Manihot esculenta HOM05D006619 ORTHO05D008351 3.0e-47 193.0 207 58.0
Ca_25054_v3 Cicer arietinum L. HOM05D006619 ORTHO05D008351 7.3e-46 188.3 204 55.9
Duzib205G1329 Durio zibethinus HOM05D006619 ORTHO05D008351 2.3e-44 183.3 203 54.2
PGR031G2471 Punica granatum HOM05D006619 ORTHO05D008351 4.0e-44 182.6 199 56.3
ClCG11G016190 Citrullus lanatus HOM05D006619 ORTHO05D008351 1.3e-42 177.6 205 53.2
DCAR_004540 Daucus carota HOM05D006619 ORTHO05D008351 9.2e-41 171.4 202 51.0
PSO017G2194 Papaver somniferum HOM05D006619 ORTHO05D008351 1.2e-40 171.0 210 52.9
EL10Ac5g12595 Beta vulgaris HOM05D006619 ORTHO05D008351 2.7e-40 169.9 196 52.0
MELO3C010535.2 Cucumis melo HOM05D006619 ORTHO05D008351 2.7e-40 169.9 205 51.7
CANSAT35G0271 Cannabis sativa HOM05D006619 ORTHO05D008351 1.0e-39 167.9 198 52.0
Peaxi162Scf00014g02116 Petunia axillaris HOM05D006619 ORTHO05D008351 1.3e-39 167.5 203 52.7
Ah.12g058350 Amaranthus hybridus HOM05D006619 ORTHO05D008351 5.1e-39 165.6 197 51.8
Lsat_1_v5_gn_3_19920 Lactuca sativa HOM05D006619 ORTHO05D008351 1.1e-38 164.5 199 53.8
PSO170G1900 Papaver somniferum HOM05D006619 ORTHO05D008351 2.5e-38 163.3 209 53.6
Sed0005654 Sechium edule HOM05D006619 ORTHO05D008351 5.6e-38 162.2 206 50.0
Phvul.002G123000 Phaseolus vulgaris HOM05D006619 ORTHO05D008351 9.5e-38 161.4 202 50.0
CsaV3_4G014810 Cucumis sativus L. HOM05D006619 ORTHO05D008351 4.7e-37 159.1 209 49.8
Lj8A366T23 Lonicera japonica HOM05D006619 ORTHO05D008351 4.7e-37 159.1 140 64.3
Sed0000478 Sechium edule HOM05D006619 ORTHO05D008351 4.7e-37 159.1 206 49.5
ECA246G4124 Erigeron canadensis HOM05D006619 ORTHO05D008351 2.4e-36 156.8 209 49.8
arahy.Tifrunner.gnm1.ann1.7E2RQS Arachis hypogaea HOM05D006619 ORTHO05D008351 1.2e-35 154.5 193 51.3
arahy.Tifrunner.gnm1.ann1.TY5C82 Arachis hypogaea HOM05D006619 ORTHO05D008351 1.2e-35 154.5 193 51.3
VMungo1215G3049 Vigna mungo HOM05D006619 ORTHO05D008351 1.5e-35 154.1 187 51.3
Nitab4.5_0000236g0060 Nicotiana tabacum HOM05D006619 ORTHO05D008351 5.8e-35 152.1 203 49.8
HanXRQChr06g0173221 Helianthus annuus HOM05D006619 ORTHO05D008351 7.6e-35 151.8 196 49.5
Cpa.g.sc137.4 Carica papaya HOM05D006619 ORTHO05D008351 9.9e-35 151.4 206 43.2
AUR62010492 Chenopodium quinoa HOM05D006619 ORTHO05D008351 2.2e-34 150.2 195 48.7
Aqoxy3G01986 Aquilegia oxysepala HOM05D006619 ORTHO05D008351 6.4e-34 148.7 205 45.4
Nitab4.5_0000975g0010 Nicotiana tabacum HOM05D006619 ORTHO05D008351 8.4e-34 148.3 203 50.7
PGSC0003DMG400020810 Solanum tuberosum HOM05D006619 ORTHO05D008351 7.1e-33 145.2 201 47.3
AUR62017411 Chenopodium quinoa HOM05D006619 ORTHO05D008351 1.2e-32 144.4 193 48.7
THA.LOC104811203 Tarenaya hassleriana HOM05D006619 ORTHO05D008351 4.6e-32 142.5 196 45.9
Sopen08g023780 Solanum pennellii HOM05D006619 ORTHO05D008351 7.8e-32 141.7 195 45.1
Hund14312 Selenicereus undatus HOM05D006619 ORTHO05D008351 3.9e-31 139.4 190 46.8
Oeu045949.2 Olea europaea HOM05D006619 ORTHO05D008351 6.6e-31 138.7 134 57.5
Cc08_g06080 Coffea canephora HOM05D006619 ORTHO05D008351 8.7e-31 138.3 202 47.5
Solyc08g075150.3 Solanum lycopersicum HOM05D006619 ORTHO05D008351 2.5e-30 136.7 202 44.6
Sc07g0008130 Simmondsia chinensis HOM05D006619 ORTHO05D008351 8.1e-29 131.7 98 71.4
SEGI_11154 Sequoiadendron giganteum HOM05D006619 ORTHO05D008351 4.0e-28 129.4 208 43.8
Migut.E01382 Erythranthe guttata HOM05D006619 ORTHO05D008351 3.4e-27 126.3 197 46.7
ATR0568G188 Amborella trichopoda HOM05D006619 ORTHO05D008351 7.6e-27 125.2 195 45.6
CDE01G0342 Ceratophyllum demersum HOM05D006619 ORTHO05D008351 7.6e-27 125.2 224 39.3
AL8G13490 Arabidopsis lyrata HOM05D006619 ORTHO05D008351 3.0e-23 113.2 100 60.0
CARHR176830 Cardamine hirsuta HOM05D006619 ORTHO05D008351 3.9e-23 112.8 195 40.0
AT5G45310 Arabidopsis thaliana HOM05D006619 ORTHO05D008351 1.5e-22 110.9 100 59.0
SHI32758 Sapria himalayana HOM05D006619 ORTHO05D008351 1.9e-22 110.5 136 48.5
Thhalv10001132m.g Eutrema salsugineum HOM05D006619 ORTHO05D008351 4.3e-22 109.4 100 58.0
Aa31LG9G7710 Aethionema arabicum HOM05D006619 ORTHO05D008351 5.6e-22 109.0 194 39.7
A09p21640 Brassica napus HOM05D006619 ORTHO05D008351 5.6e-22 109.0 100 60.0
BraA09t37763Z Brassica rapa HOM05D006619 ORTHO05D008351 5.6e-22 109.0 100 60.0
BcaC04g21786 Brassica carinata HOM05D006619 ORTHO05D008351 9.6e-22 108.2 103 58.3
C09p27640 Brassica napus HOM05D006619 ORTHO05D008351 9.6e-22 108.2 103 58.3
BolC9t55627H Brassica oleracea HOM05D006619 ORTHO05D008351 9.6e-22 108.2 103 58.3
Carub.0008s0284 Capsella rubella HOM05D006619 ORTHO05D008351 9.6e-22 108.2 199 39.7
BcaB07g30899 Brassica carinata HOM05D006619 ORTHO05D008351 1.3e-21 107.8 100 59.0
SalBow1G1985 Salvia bowleyana HOM05D006619 ORTHO05D008351 3.6e-21 106.3 109 56.9
Sp2g10250 Schrenkiella parvula HOM05D006619 ORTHO05D008351 4.8e-21 105.9 171 40.4
SalBow8G3333 Salvia bowleyana HOM05D006619 ORTHO05D008351 8.1e-21 105.1 109 56.9
SGA_v2.0_scaffold121G33054 Striga asiatica HOM05D006619 ORTHO05D008351 1.7e-18 97.4 127 50.4
AagrBONN_evm.TU.Sc2ySwM_117.1666 Anthoceros agrestis HOM05D006619 ORTHO05D008351 2.9e-18 96.7 95 57.9
AagrBONN_evm.TU.Sc2ySwM_344.2089 Anthoceros agrestis HOM05D006619 ORTHO05D008351 6.4e-18 95.5 90 60.0
SMO367G0687 Selaginella moellendorffii HOM05D003392 ORTHO05D003801 1.1e-17 94.7 99 56.6
MD16G1286500 Malus domestica HOM05D006619 ORTHO05D008351 1.9e-17 94.0 127 44.1
HPP92_015143 Vanilla planifolia HOM05D000346 ORTHO05D004932 1.3e-15 87.8 83 57.8
Pp3c25_50 Physcomitrium patens HOM05D006619 ORTHO05D008351 1.8e-15 87.4 152 38.8
EL10Ac5g12596 Beta vulgaris HOM05D006619 ORTHO05D008351 3.3e-14 83.2 111 44.1
COL.COLO4_16514 Corchorus olitorius HOM05D006619 ORTHO05D008351 6.9e-12 75.5 131 42.0
COL.COLO4_08066 Corchorus olitorius HOM05D004199 ORTHO05D025158 2.9e-10 70.1 123 38.2
Zm00001eb140380 Zea mays HOM05D006619 ORTHO05D008351 1.2e-08 64.7 85 44.7


User provided reference genes

Program Settings