Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p002612 Quercus lobata HOM05D007311 ORTHO05D009011 3.0e-69 265.0 128 100.0
QL12p002522 Quercus lobata HOM05D007311 ORTHO05D009011 5.4e-63 244.2 148 84.5
CiPaw.11G077300 Carya illinoinensis HOM05D007311 ORTHO05D009011 6.0e-54 214.2 147 73.5
Prupe.5G015700 Prunus persica HOM05D007311 ORTHO05D009011 1.0e-53 213.4 146 72.6
RcHm_v2.0_Chr7g0214961 Rosa chinensis HOM05D007311 ORTHO05D009011 2.5e-52 208.8 147 70.7
Manes.15G187600 Manihot esculenta HOM05D007311 ORTHO05D009011 9.6e-52 206.8 147 70.1
MD16G1286900 Malus domestica HOM05D007311 ORTHO05D009011 2.1e-51 205.7 147 69.4
FAN08G0573 Fragaria x ananassa HOM05D007311 ORTHO05D009011 3.1e-50 201.8 144 69.4
FAN18G0784 Fragaria x ananassa HOM05D007311 ORTHO05D009011 4.1e-50 201.4 171 60.8
TWI32G0505 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 1.2e-49 199.9 147 66.0
Haze_08033 Corylus avellana HOM05D007311 ORTHO05D009011 2.6e-49 198.7 213 52.6
Lalb_Chr15g0076111 Lupinus albus HOM05D007311 ORTHO05D009011 2.6e-49 198.7 147 67.3
FvH4_5g24490 Fragaria vesca HOM05D007311 ORTHO05D009011 4.5e-49 198.0 171 59.6
Oeu031947.3 Olea europaea HOM05D007311 ORTHO05D009011 5.8e-49 197.6 167 58.1
Duzib205G2009 Durio zibethinus HOM05D007311 ORTHO05D009011 7.6e-49 197.2 147 63.9
Glyma.19G247100 Glycine max HOM05D007311 ORTHO05D009011 1.7e-48 196.1 147 66.0
Glyma.03G249600 Glycine max HOM05D007311 ORTHO05D009011 2.9e-48 195.3 147 64.6
COL.COLO4_16729 Corchorus olitorius HOM05D007311 ORTHO05D009011 3.8e-48 194.9 147 64.6
Nn3g18546 Nelumbo nucifera HOM05D007311 ORTHO05D009011 3.8e-48 194.9 146 62.3
TAR629G0827 Trochodendron aralioides HOM05D007311 ORTHO05D009011 6.5e-48 194.1 147 63.9
Cfa012633 Carpinus fangiana HOM05D007311 ORTHO05D009011 8.4e-48 193.7 136 70.6
Gohir.D08G169100 Gossypium hirsutum HOM05D007311 ORTHO05D009011 8.4e-48 193.7 147 64.6
Phvul.006G104200 Phaseolus vulgaris HOM05D007311 ORTHO05D009011 8.4e-48 193.7 147 64.6
Lj1g0003439 Lotus japonicus HOM05D007311 ORTHO05D009011 1.1e-47 193.4 147 66.0
GSVIVG01036913001 Vitis vinifera HOM05D007311 ORTHO05D009011 1.9e-47 192.6 147 63.9
arahy.Tifrunner.gnm1.ann1.C28JQA Arachis hypogaea HOM05D007311 ORTHO05D009011 4.2e-47 191.4 147 62.6
arahy.Tifrunner.gnm1.ann1.M0M2WX Arachis hypogaea HOM05D007311 ORTHO05D009011 4.2e-47 191.4 147 62.6
VMungo0540G0453 Vigna mungo HOM05D007311 ORTHO05D009011 4.2e-47 191.4 147 63.3
Migut.E01383 Erythranthe guttata HOM05D007311 ORTHO05D009011 9.3e-47 190.3 147 64.6
Potri.003G106700 Populus trichocarpa HOM05D007311 ORTHO05D009011 9.3e-47 190.3 148 64.9
Aqoxy102s011 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 1.2e-46 189.9 147 60.5
Aqoxy2G03516 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 1.2e-46 189.9 147 60.5
Hma1.2p1_0294F.1_g116450 Hydrangea macrophylla HOM05D007311 ORTHO05D009011 1.2e-46 189.9 145 64.8
THA.LOC104811225 Tarenaya hassleriana HOM05D007311 ORTHO05D009011 1.2e-46 189.9 147 60.5
Ciclev10002031m.g Citrus clementina HOM05D007311 ORTHO05D009011 1.0e-45 186.8 147 59.9
Cc01_g03300 Coffea canephora HOM05D007311 ORTHO05D009011 1.3e-45 186.4 144 64.6
Gohir.A08G147900 Gossypium hirsutum HOM05D007311 ORTHO05D009011 1.3e-45 186.4 147 63.3
PGR031G0344 Punica granatum HOM05D007311 ORTHO05D009011 1.3e-45 186.4 147 59.2
Sabra03G0073500 Salix brachista HOM05D007311 ORTHO05D009011 2.3e-45 185.7 148 62.8
Thecc.03G322100 Theobroma cacao HOM05D007311 ORTHO05D009011 3.0e-45 185.3 153 63.4
ClCG07G011190 Citrullus lanatus HOM05D000351 ORTHO05D000250 3.9e-45 184.9 147 60.5
CANSAT35G1819 Cannabis sativa HOM05D000351 ORTHO05D000250 1.5e-44 183.0 152 60.5
Psat0s3161g0160 Pisum sativum HOM05D007311 ORTHO05D009011 1.9e-44 182.6 146 64.4
Nitab4.5_0000623g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 2.5e-44 182.2 145 60.0
SalBow3G0367 Salvia bowleyana HOM05D007311 ORTHO05D009011 3.3e-44 181.8 146 61.0
Medtr7g115450 Medicago truncatula HOM05D007311 ORTHO05D009011 4.3e-44 181.4 146 63.7
Medtr7g115470 Medicago truncatula HOM05D007311 ORTHO05D009011 4.3e-44 181.4 146 63.7
Nitab4.5_0007008g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 4.3e-44 181.4 145 59.3
MELO3C016211.2 Cucumis melo HOM05D007311 ORTHO05D009011 5.7e-44 181.0 147 59.9
Dinv37446 Davidia involucrata HOM05D007311 ORTHO05D009011 7.4e-44 180.6 99 85.9
Aa31LG6G2000 Aethionema arabicum HOM05D007311 ORTHO05D009011 1.3e-43 179.9 147 60.5
Ca_09529_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 1.3e-43 179.9 146 62.3
Solyc08g075070.3 Solanum lycopersicum HOM05D007311 ORTHO05D009011 1.3e-43 179.9 145 60.0
vmacro22112 Vaccinium macrocarpon HOM05D007311 ORTHO05D009011 1.3e-43 179.9 170 55.3
MSTRG.1753 Avicennia marina HOM05D007311 ORTHO05D009011 1.6e-43 179.5 147 59.2
CsaV3_4G007060 Cucumis sativus L. HOM05D007311 ORTHO05D009011 1.6e-43 179.5 146 59.6
Peaxi162Scf00330g01216 Petunia axillaris HOM05D007311 ORTHO05D009011 2.2e-43 179.1 146 58.2
TPR.G7011 Trifolium pratense HOM05D007311 ORTHO05D009011 2.2e-43 179.1 146 61.6
AUR62039076 Chenopodium quinoa HOM05D007311 ORTHO05D009011 6.3e-43 177.6 145 58.6
CAN.G22.34 Capsicum annuum HOM05D007311 ORTHO05D009011 8.2e-43 177.2 145 58.6
Gorai.004G176300 Gossypium raimondii HOM05D007311 ORTHO05D009011 1.1e-42 176.8 185 51.9
CSS0046759 Camellia sinensis var. sinensis HOM05D007311 ORTHO05D009011 1.4e-42 176.4 105 82.9
DCAR_030948 Daucus carota HOM05D007311 ORTHO05D009011 5.3e-42 174.5 147 60.5
ECA233G4235 Erigeron canadensis HOM05D007311 ORTHO05D009011 5.3e-42 174.5 150 57.3
BraA01t01079Z Brassica rapa HOM05D007311 ORTHO05D009011 6.9e-42 174.1 147 56.5
Sed0011898 Sechium edule HOM05D000351 ORTHO05D000250 6.9e-42 174.1 145 59.3
HanXRQChr07g0198461 Helianthus annuus HOM05D007311 ORTHO05D009011 9.0e-42 173.7 148 54.7
A01p11360 Brassica napus HOM05D000351 ORTHO05D009011 1.5e-41 172.9 147 55.8
BcaC09g51414 Brassica carinata HOM05D007311 ORTHO05D009011 2.6e-41 172.2 147 56.5
C01p13360 Brassica napus HOM05D007311 ORTHO05D009011 5.9e-41 171.0 147 55.8
EL10Ac9g22274 Beta vulgaris HOM05D007311 ORTHO05D009011 7.7e-41 170.6 146 56.8
Thhalv10024796m.g Eutrema salsugineum HOM05D000351 ORTHO05D009011 7.7e-41 170.6 147 55.8
Lsat_1_v5_gn_9_12020 Lactuca sativa HOM05D007311 ORTHO05D009011 7.7e-41 170.6 147 56.5
Sp7g18020 Schrenkiella parvula HOM05D007311 ORTHO05D009011 1.0e-40 170.2 146 56.2
MBI03_g29283_MAGBIO Magnolia biondii HOM05D006174 ORTHO05D007987 2.2e-40 169.1 112 73.2
CDE11G0786 Ceratophyllum demersum HOM05D007311 ORTHO05D009011 2.9e-40 168.7 147 56.5
PGSC0003DMG400020814 Solanum tuberosum HOM05D007311 ORTHO05D009011 2.9e-40 168.7 173 48.6
Sc18g0005580 Simmondsia chinensis HOM05D007311 ORTHO05D009011 3.8e-40 168.3 134 62.7
PSO210G1792 Papaver somniferum HOM05D007311 ORTHO05D009011 5.0e-40 167.9 146 54.8
Hund06317 Selenicereus undatus HOM05D007311 ORTHO05D009011 5.0e-40 167.9 147 56.5
Eucgr.E01832 Eucalyptus grandis HOM05D007311 ORTHO05D009011 8.5e-40 167.2 105 76.2
AT4G19400 Arabidopsis thaliana HOM05D007311 ORTHO05D009011 1.4e-39 166.4 147 55.8
AT4G19410 Arabidopsis thaliana HOM05D000351 ORTHO05D009011 1.4e-39 166.4 147 55.8
CARHR226190 Cardamine hirsuta HOM05D007311 ORTHO05D009011 1.4e-39 166.4 146 55.5
Carub.0007s2183 Capsella rubella HOM05D007311 ORTHO05D009011 2.5e-39 165.6 147 55.1
PSO238G0022 Papaver somniferum HOM05D007311 ORTHO05D009011 2.5e-39 165.6 146 54.1
BcaNung01781 Brassica carinata HOM05D007311 ORTHO05D009011 9.4e-39 163.7 146 53.4
SGA_v2.0_scaffold144G35891 Striga asiatica HOM05D007311 ORTHO05D009011 9.4e-39 163.7 164 51.8
ATR0796G066 Amborella trichopoda HOM05D007311 ORTHO05D009011 1.2e-38 163.3 147 54.4
AL7G34740 Arabidopsis lyrata HOM05D007311 ORTHO05D009011 1.8e-37 159.5 147 53.1
HPP92_005283 Vanilla planifolia HOM05D007311 ORTHO05D009011 3.0e-37 158.7 144 52.1
unitig_899.g14733 Utricularia gibba HOM05D007311 ORTHO05D009011 5.7e-36 154.5 148 52.7
Sopen08g023700 Solanum pennellii HOM05D007311 ORTHO05D009011 1.1e-34 150.2 93 73.1
Ah.01g011070 Amaranthus hybridus HOM05D007311 ORTHO05D009011 5.3e-34 147.9 102 70.6
AUR62010310 Chenopodium quinoa HOM05D007311 ORTHO05D009011 3.4e-33 145.2 119 57.1
Cpa.g.sc542.2 Carica papaya HOM05D007311 ORTHO05D009011 5.9e-33 144.4 124 58.1
Zm00001eb284430 Zea mays HOM05D007311 ORTHO05D009011 4.2e-31 138.3 145 45.5
SEGI_31752 Sequoiadendron giganteum HOM05D007311 ORTHO05D009011 3.3e-28 128.6 101 55.4
Eucgr.E01869 Eucalyptus grandis HOM05D007311 ORTHO05D009011 1.6e-22 109.8 65 78.5
Os05g0241400 Oryza sativa ssp. japonica HOM05D007311 ORTHO05D009011 8.8e-21 104.0 119 39.5
SalBow1G6002 Salvia bowleyana HOM05D007311 ORTHO05D009011 8.8e-21 104.0 64 78.1
BcaC02g07636 Brassica carinata HOM05D007311 ORTHO05D009011 1.1e-20 103.6 101 55.4
SalBow8G5581 Salvia bowleyana HOM05D007311 ORTHO05D009011 1.5e-20 103.2 65 75.4
TWI60G1527 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 1.3e-19 100.1 147 40.8
AagrBONN_evm.TU.Sc2ySwM_228.4293 Anthoceros agrestis HOM05D007311 ORTHO05D009011 2.9e-16 89.0 133 31.6
Rhsim07G0141400 Rhododendron simsii HOM05D000351 ORTHO05D000250 7.2e-15 84.3 47 87.2
Medtr5g045430 Medicago truncatula HOM05D007311 ORTHO05D009011 2.3e-13 79.3 65 61.5
SMO139G0010 Selaginella moellendorffii HOM05D007311 ORTHO05D009011 2.6e-12 75.9 147 30.6
Ca_12103_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 1.8e-10 69.7 38 81.6
Mapoly0040s0015 Marchantia polymorpha HOM05D007311 ORTHO05D009011 4.1e-10 68.6 146 26.7
Ciclev10003443m.g Citrus clementina HOM05D007311 ORTHO05D009011 5.4e-10 68.2 69 43.5
Eucgr.E01843 Eucalyptus grandis HOM05D007311 ORTHO05D009011 5.0e-08 61.6 46 56.5
Medtr2g084355 Medicago truncatula HOM05D003237 ORTHO05D003631 5.0e-08 61.6 43 69.8
Eucgr.E01790 Eucalyptus grandis HOM05D007311 ORTHO05D009011 3.2e-07 58.9 39 71.8


User provided reference genes

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