Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p056564 Quercus lobata HOM05D005766 ORTHO05D007002 4.9e-235 817.4 401 100.0
Cfa016332 Carpinus fangiana HOM05D005766 ORTHO05D007002 1.1e-197 693.3 425 81.6
CiPaw.05G259700 Carya illinoinensis HOM05D005766 ORTHO05D007002 2.8e-190 668.7 416 80.3
Haze_00083 Corylus avellana HOM05D005766 ORTHO05D007002 3.0e-184 648.7 519 66.5
Prupe.2G304700 Prunus persica HOM05D005766 ORTHO05D007002 2.3e-176 622.5 416 76.2
CANSAT21G0601 Cannabis sativa HOM05D005766 ORTHO05D007002 7.2e-170 600.9 417 75.3
TAR629G2087 Trochodendron aralioides HOM05D005766 ORTHO05D007002 7.9e-169 597.4 417 74.6
MD01G1212200 Malus domestica HOM05D005766 ORTHO05D007002 2.3e-168 595.9 392 77.3
GSVIVG01028775001 Vitis vinifera HOM05D005766 ORTHO05D007002 2.3e-168 595.9 417 73.4
Rhsim03G0196600 Rhododendron simsii HOM05D005766 ORTHO05D007002 2.8e-166 589.0 426 71.6
Thecc.03G188900 Theobroma cacao HOM05D005766 ORTHO05D007002 3.7e-166 588.6 404 74.5
Gohir.A12G254600 Gossypium hirsutum HOM05D005766 ORTHO05D007002 5.3e-165 584.7 404 73.5
Gorai.008G272400 Gossypium raimondii HOM05D005766 ORTHO05D007002 9.1e-165 583.9 404 73.3
MD07G1282600 Malus domestica HOM05D005766 ORTHO05D007002 9.1e-165 583.9 440 69.8
CsaV3_3G021770 Cucumis sativus L. HOM05D005766 ORTHO05D007002 2.6e-164 582.4 415 70.8
RcHm_v2.0_Chr1g0379661 Rosa chinensis HOM05D005766 ORTHO05D007002 3.5e-164 582.0 415 74.0
Gohir.D12G254700 Gossypium hirsutum HOM05D005766 ORTHO05D007002 7.7e-164 580.9 404 72.8
Duzib205G0439 Durio zibethinus HOM05D005766 ORTHO05D007002 1.5e-162 576.6 403 74.2
Potri.015G026100 Populus trichocarpa HOM05D005766 ORTHO05D007002 5.5e-162 574.7 416 72.4
MBI07_g26934_MAGBIO Magnolia biondii HOM05D005766 ORTHO05D007002 1.2e-161 573.5 392 74.7
Lalb_Chr06g0161411 Lupinus albus HOM05D005766 ORTHO05D007002 8.0e-161 570.9 416 70.4
Dinv28359 Davidia involucrata HOM05D005766 ORTHO05D007002 2.6e-159 565.8 415 70.8
Aqoxy5G04049 Aquilegia oxysepala HOM05D005766 ORTHO05D007002 5.7e-159 564.7 384 74.2
Hma1.2p1_0327F.1_g126600 Hydrangea macrophylla HOM05D005766 ORTHO05D007002 7.5e-159 564.3 403 72.0
Nn1g01746 Nelumbo nucifera HOM05D005766 ORTHO05D007002 1.3e-158 563.5 417 70.0
MELO3C006963.2 Cucumis melo HOM05D005766 ORTHO05D007002 8.2e-158 560.8 422 69.0
PSO170G0163 Papaver somniferum HOM05D005766 ORTHO05D007002 8.2e-158 560.8 408 70.1
Ca_10701_v3 Cicer arietinum L. HOM05D005766 ORTHO05D007002 1.1e-157 560.5 397 73.3
Eucgr.K00307 Eucalyptus grandis HOM05D005766 ORTHO05D007002 2.4e-157 559.3 391 74.9
ClCG05G008560 Citrullus lanatus HOM05D005766 ORTHO05D007002 1.6e-156 556.6 400 71.5
Glyma.10G228700 Glycine max HOM05D005766 ORTHO05D007002 2.0e-156 556.2 418 69.9
vmacro06594 Vaccinium macrocarpon HOM05D005766 ORTHO05D007002 4.5e-156 555.1 476 63.4
PGR004G1861 Punica granatum HOM05D005766 ORTHO05D007002 1.3e-155 553.5 416 70.2
Medtr1g099380 Medicago truncatula HOM05D005766 ORTHO05D007002 2.9e-155 552.4 389 74.0
HanXRQChr14g0440231 Helianthus annuus HOM05D005766 ORTHO05D007002 1.2e-153 547.0 334 80.8
TPR.G7746 Trifolium pratense HOM05D005766 ORTHO05D007002 1.6e-153 546.6 391 72.9
ECA238G0894 Erigeron canadensis HOM05D005766 ORTHO05D000105 4.7e-153 545.0 405 69.6
Atru.chr1.315 Acer truncatum HOM05D005766 ORTHO05D007002 1.4e-152 543.5 418 69.9
Glyma.20G164300 Glycine max HOM05D005766 ORTHO05D007002 4.0e-152 542.0 417 68.8
Phvul.007G077400 Phaseolus vulgaris HOM05D005766 ORTHO05D007002 1.2e-151 540.4 397 72.0
Lj5g0016487 Lotus japonicus HOM05D005766 ORTHO05D007002 2.6e-151 539.3 339 79.6
Psat6g194920 Pisum sativum HOM05D005766 ORTHO05D007002 2.6e-151 539.3 417 68.1
Lsat_1_v5_gn_2_61121 Lactuca sativa HOM05D005766 ORTHO05D007002 5.7e-151 538.1 414 68.6
Cc02_g02130 Coffea canephora HOM05D005766 ORTHO05D007002 2.2e-150 536.2 337 77.2
HPP92_022503 Vanilla planifolia HOM05D005766 ORTHO05D007002 2.0e-148 529.6 401 68.3
Sopen12g011340 Solanum pennellii HOM05D005766 ORTHO05D007002 2.2e-147 526.2 330 78.2
Oeu003335.2 Olea europaea HOM05D005766 ORTHO05D007002 2.9e-147 525.8 379 70.2
Sc13g0009380 Simmondsia chinensis HOM05D005766 ORTHO05D007002 1.1e-146 523.9 390 70.8
Manes.14G020100 Manihot esculenta HOM05D005766 ORTHO05D007002 9.4e-146 520.8 379 70.4
ATR1131G022 Amborella trichopoda HOM05D005766 ORTHO05D007002 1.4e-144 516.9 347 73.5
Migut.F00259 Erythranthe guttata HOM05D005766 ORTHO05D007002 8.3e-142 507.7 354 70.6
Ah.07g206240 Amaranthus hybridus HOM05D005766 ORTHO05D007002 3.1e-141 505.8 413 64.4
EL10Ac3g05375 Beta vulgaris HOM05D005766 ORTHO05D007002 5.9e-140 501.5 330 75.8
Sed0015140 Sechium edule HOM05D005766 ORTHO05D007002 1.7e-139 500.0 375 68.8
FvH4_7g30700 Fragaria vesca HOM05D005766 ORTHO05D007002 3.8e-139 498.8 379 71.5
arahy.Tifrunner.gnm1.ann1.M1FPNI Arachis hypogaea HOM05D005766 ORTHO05D007002 3.3e-138 495.7 390 66.7
Peaxi162Scf00023g00720 Petunia axillaris HOM05D005766 ORTHO05D007002 1.6e-137 493.4 428 62.4
arahy.Tifrunner.gnm1.ann1.8957SA Arachis hypogaea HOM05D005766 ORTHO05D007002 3.0e-136 489.2 421 63.2
Lj1A1010T47 Lonicera japonica HOM05D005766 ORTHO05D007002 1.3e-134 483.8 401 64.6
Sabra15G0019200 Salix brachista HOM05D005766 ORTHO05D007002 2.4e-133 479.6 406 65.5
QL09p011984 Quercus lobata HOM05D005766 ORTHO05D007002 1.0e-131 474.2 284 85.9
CDE02G1402 Ceratophyllum demersum HOM05D001977 ORTHO05D002246 4.3e-130 468.8 288 79.5
SalBow4G0986 Salvia bowleyana HOM05D005766 ORTHO05D007002 7.8e-124 448.0 348 67.0
Hund04814 Selenicereus undatus HOM05D005766 ORTHO05D007002 5.8e-119 431.8 364 63.7
FAN10G0167 Fragaria x ananassa HOM05D005766 ORTHO05D007002 7.3e-114 414.8 433 57.3
FAN10G3945 Fragaria x ananassa HOM05D005766 ORTHO05D007002 9.5e-114 414.5 433 57.0
FAN06G2288 Fragaria x ananassa HOM05D005766 ORTHO05D007002 1.2e-113 414.1 409 60.1
Mapoly0113s0021 Marchantia polymorpha HOM05D005766 ORTHO05D007002 1.2e-111 407.5 391 54.2
CSS0024367 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 1.5e-111 407.1 278 74.5
CSS0041625 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 3.4e-111 406.0 278 74.1
SGA_v2.0_scaffold192G40599 Striga asiatica HOM05D005766 ORTHO05D007002 3.4e-111 406.0 249 78.3
Glyma.09G181880 Glycine max HOM05D005766 ORTHO05D007002 8.6e-107 391.3 244 80.3
AagrBONN_evm.TU.Sc2ySwM_344.4899 Anthoceros agrestis HOM05D005766 ORTHO05D007002 1.9e-101 373.6 332 56.6
Cpa.g.sc3.14 Carica papaya HOM05D005766 ORTHO05D007002 4.2e-101 372.5 351 58.4
Nitab4.5_0014657g0010 Nicotiana tabacum HOM05D005766 ORTHO05D007002 1.1e-98 364.4 257 72.0
FAN03G2278 Fragaria x ananassa HOM05D005766 ORTHO05D007002 1.6e-97 360.5 459 50.3
TWI39G0494 Tripterygium wilfordii HOM05D005766 ORTHO05D007002 6.4e-94 348.6 258 70.5
Ciclev10004767m.g Citrus clementina HOM05D005766 ORTHO05D007002 5.6e-82 308.9 245 64.9
Sabra15G0021700 Salix brachista HOM05D005766 ORTHO05D007002 3.9e-75 286.2 267 60.7
Actinidia08607 Actinidia chinensis HOM05D005766 ORTHO05D007002 2.1e-73 280.4 152 88.2
FAN06G1885 Fragaria x ananassa HOM05D005766 ORTHO05D007002 2.6e-71 273.5 224 67.9
SMO203G0206 Selaginella moellendorffii HOM05D005766 ORTHO05D007002 4.5e-71 272.7 330 47.0
CBR_g23333 Chara braunii HOM05D005766 ORTHO05D007002 8.5e-70 268.5 316 46.2
FAN01G0765 Fragaria x ananassa HOM05D005766 ORTHO05D007002 7.2e-69 265.4 224 67.0
unitig_37.g11976 Utricularia gibba HOM05D005766 ORTHO05D007002 3.6e-68 263.1 265 52.8
Nitab4.5_0000157g0190 Nicotiana tabacum HOM05D005766 ORTHO05D007002 8.2e-65 251.9 151 81.5
TWI39G0059 Tripterygium wilfordii HOM05D005766 ORTHO05D007002 4.5e-63 246.1 168 73.2
SEGI_39054 Sequoiadendron giganteum HOM05D005766 ORTHO05D007002 6.1e-60 235.7 135 84.4
Glyma.03G072901 Glycine max HOM05D005766 ORTHO05D007002 2.6e-50 203.8 115 83.5
Glyma.12G172150 Glycine max HOM05D005766 ORTHO05D007002 3.8e-46 189.9 131 75.6
Nitab4.5_0000327g0060 Nicotiana tabacum HOM05D005766 ORTHO05D007002 4.5e-39 166.4 90 87.8
QL09p011981 Quercus lobata HOM05D005766 ORTHO05D007002 8.5e-38 162.2 103 80.6
Glyma.10G228301 Glycine max HOM05D005766 ORTHO05D007002 2.5e-37 160.6 81 91.4
Glyma.16G148650 Glycine max HOM05D005766 ORTHO05D007002 2.5e-37 160.6 81 91.4
PRCOL_00006853 Prasinoderma coloniale HOM05D005766 ORTHO05D007002 1.7e-33 147.9 363 32.5
Cfa000854 Carpinus fangiana HOM05D005766 ORTHO05D007002 1.5e-29 134.8 102 70.6
Actinidia08608 Actinidia chinensis HOM05D005766 ORTHO05D007002 4.0e-27 126.7 68 86.8
CSS0010184 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 8.8e-27 125.6 77 77.9
CSS0002634 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 3.7e-25 120.2 67 85.1
DCAR_008901 Daucus carota HOM05D000149 ORTHO05D000076 5.9e-23 112.8 276 33.0
COL.COLO4_30253 Corchorus olitorius HOM05D005766 ORTHO05D007002 5.7e-18 96.3 95 54.7
Cre01.g002700 Chlamydomonas reinhardtii HOM05D005766 ORTHO05D007002 2.3e-14 84.3 258 25.2
Peaxi162Scf00603g00414 Petunia axillaris HOM05D007579 ORTHO05D000285 3.3e-13 80.5 65 60.0
arahy.Tifrunner.gnm1.ann1.3HS4ZY Arachis hypogaea HOM05D005766 ORTHO05D007002 1.4e-08 65.1 71 47.9
arahy.Tifrunner.gnm1.ann1.DC2VU6 Arachis hypogaea HOM05D000702 ORTHO05D007002 2.4e-08 64.3 208 30.8
Glyma.08G354500 Glycine max HOM05D000836 ORTHO05D000709 7.0e-08 62.8 248 23.4
ECA233G2827 Erigeron canadensis HOM05D000836 ORTHO05D000709 4.6e-07 60.1 238 26.5
Medtr1g097140 Medicago truncatula HOM05D003913 ORTHO05D004803 6.0e-07 59.7 316 23.7
Glyma.05G071000 Glycine max HOM05D000836 ORTHO05D000709 7.8e-07 59.3 248 23.0
PSO675G6139 Papaver somniferum HOM05D004669 ORTHO05D005767 1.0e-06 58.9 266 27.4
CSS0035081 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 2.3e-06 57.8 37 75.7
Psat6g188560 Pisum sativum HOM05D000168 ORTHO05D004803 3.0e-06 57.4 314 21.3
Cre01.g034600 Chlamydomonas reinhardtii HOM05D007125 ORTHO05D008766 3.9e-06 57.0 231 25.1
GSVIVG01035793001 Vitis vinifera HOM05D000836 ORTHO05D000709 3.9e-06 57.0 213 24.4
Cc07_g06500 Coffea canephora HOM05D002634 ORTHO05D003100 5.0e-06 56.6 232 24.6
SalBow2G0244 Salvia bowleyana HOM05D004669 ORTHO05D005767 5.0e-06 56.6 246 24.4
TWI39G1032 Tripterygium wilfordii HOM05D002332 ORTHO05D002509 5.0e-06 56.6 194 24.7
CSS0038194 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 8.6e-06 55.8 37 73.0
Eucgr.J03040 Eucalyptus grandis HOM05D004669 ORTHO05D005767 8.6e-06 55.8 194 28.4
FAN24G1350 Fragaria x ananassa HOM05D000836 ORTHO05D000709 8.6e-06 55.8 202 24.8
SMO356G0696 Selaginella moellendorffii HOM05D004669 ORTHO05D005767 8.6e-06 55.8 264 26.1


User provided reference genes

Program Settings