Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p007195 Quercus lobata HOM05D000509 ORTHO05D006393 3.4e-36 154.5 77 100.0
QL11p053603 Quercus lobata HOM05D000509 ORTHO05D006393 3.4e-36 154.5 77 100.0
QL08p048801 Quercus lobata HOM05D000509 ORTHO05D006393 3.9e-32 141.0 72 98.6
QL93p0259_0027 Quercus lobata HOM05D000509 ORTHO05D006393 5.3e-29 130.6 72 91.7
QL01p005382 Quercus lobata HOM05D000509 ORTHO05D006393 4.5e-28 127.5 72 90.3
CiPaw.01G061300 Carya illinoinensis HOM05D000509 ORTHO05D006393 6.9e-21 103.6 72 73.6
Ciclev10022504m.g Citrus clementina HOM05D000509 ORTHO05D006393 1.3e-19 99.4 73 69.9
Haze_15506 Corylus avellana HOM05D000509 ORTHO05D006393 3.8e-19 97.8 72 70.8
CiPaw.02G030900 Carya illinoinensis HOM05D000509 ORTHO05D006393 1.9e-18 95.5 72 70.8
Cfa003925 Carpinus fangiana HOM05D000509 ORTHO05D006393 1.2e-17 92.8 71 67.6
TPR.G37720 Trifolium pratense HOM05D000509 ORTHO05D006393 5.1e-16 87.4 68 64.7
Dinv32484 Davidia involucrata HOM05D000509 ORTHO05D006393 6.7e-16 87.0 72 63.9
Cpa.g.sc11.3 Carica papaya HOM05D000509 ORTHO05D006393 1.1e-15 86.3 65 67.7
Actinidia12704 Actinidia chinensis HOM05D000509 ORTHO05D006393 1.3e-14 82.8 71 62.0
Dinv41795 Davidia involucrata HOM05D000509 ORTHO05D006393 1.3e-14 82.8 72 62.5
GSVIVG01008341001 Vitis vinifera HOM05D000509 ORTHO05D006393 3.7e-14 81.3 69 60.9
Ca_07920_v3 Cicer arietinum L. HOM05D000509 ORTHO05D006393 4.8e-14 80.9 61 67.2
Glyma.18G233000 Glycine max HOM05D000509 ORTHO05D006393 8.2e-14 80.1 72 59.7
Eucgr.B00880 Eucalyptus grandis HOM05D000509 ORTHO05D006393 1.8e-13 79.0 73 61.6
Eucgr.B00993 Eucalyptus grandis HOM05D000509 ORTHO05D006393 1.8e-13 79.0 73 61.6
Thecc.04G199400 Theobroma cacao HOM05D000509 ORTHO05D006393 4.1e-13 77.8 72 58.3
TWI14G0500 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 4.1e-13 77.8 68 60.3
Duzib151G0093 Durio zibethinus HOM05D000509 ORTHO05D006393 5.3e-13 77.4 71 59.2
Eucgr.L01454 Eucalyptus grandis HOM05D000509 ORTHO05D006393 5.3e-13 77.4 73 60.3
vmacro20943 Vaccinium macrocarpon HOM05D000509 ORTHO05D006393 1.2e-12 76.3 72 54.2
Manes.10G122200 Manihot esculenta HOM05D000509 ORTHO05D006393 1.5e-12 75.9 71 56.3
Psat3g108360 Pisum sativum HOM05D000509 ORTHO05D006393 1.5e-12 75.9 68 57.4
VMungo1383G0114 Vigna mungo HOM05D000509 ORTHO05D006393 2.6e-12 75.1 72 56.9
Phvul.008G062400 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 4.5e-12 74.3 72 56.9
GSVIVG01003391001 Vitis vinifera HOM05D000509 ORTHO05D006393 4.5e-12 74.3 56 64.3
Potri.016G069200 Populus trichocarpa HOM05D000509 ORTHO05D006393 5.9e-12 73.9 69 60.9
Rhsim07G0118400 Rhododendron simsii HOM05D000509 ORTHO05D006393 5.9e-12 73.9 74 50.0
Manes.07G019100 Manihot esculenta HOM05D000509 ORTHO05D006393 1.0e-11 73.2 71 53.5
Sabra02G0116600 Salix brachista HOM05D000509 ORTHO05D006393 1.7e-11 72.4 69 58.0
TAR636G2420 Trochodendron aralioides HOM05D000509 ORTHO05D006393 2.2e-11 72.0 71 57.7
VMungo0540G0837 Vigna mungo HOM05D000509 ORTHO05D006393 2.2e-11 72.0 68 58.8
Rhsim07G0117300 Rhododendron simsii HOM05D000509 ORTHO05D006393 2.9e-11 71.6 70 52.9
Rhsim07G0117600 Rhododendron simsii HOM05D000509 ORTHO05D006393 6.5e-11 70.5 56 60.7
TWI23G0635 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 6.5e-11 70.5 68 55.9
Actinidia33421 Actinidia chinensis HOM05D001542 ORTHO05D001416 8.5e-11 70.1 70 55.7
Gohir.A02G020500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 1.4e-10 69.3 68 55.9
Gohir.A08G013720 Gossypium hirsutum HOM05D000509 ORTHO05D006393 1.4e-10 69.3 68 55.9
Phvul.008G065500 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 1.4e-10 69.3 72 52.8
arahy.Tifrunner.gnm1.ann1.E8SAKG Arachis hypogaea HOM05D000509 ORTHO05D006393 1.9e-10 68.9 74 51.4
arahy.Tifrunner.gnm1.ann1.NYL5F5 Arachis hypogaea HOM05D000509 ORTHO05D006393 1.9e-10 68.9 74 51.4
Lalb_Chr03g0038131 Lupinus albus HOM05D000509 ORTHO05D006393 1.9e-10 68.9 72 51.4
AT3G61370 Arabidopsis thaliana HOM05D000509 ORTHO05D006393 3.2e-10 68.2 72 48.6
CSS0014005 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 3.2e-10 68.2 69 52.2
CSS0014656 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 3.2e-10 68.2 69 52.2
HanXRQChr09g0257651 Helianthus annuus HOM05D000509 ORTHO05D006393 3.2e-10 68.2 70 50.0
Prupe.2G170600 Prunus persica HOM05D000509 ORTHO05D006393 3.2e-10 68.2 73 54.8
RcHm_v2.0_Chr1g0355271 Rosa chinensis HOM05D000509 ORTHO05D006393 3.2e-10 68.2 62 58.1
Gohir.D02G024500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 4.2e-10 67.8 71 53.5
Gorai.005G030400 Gossypium raimondii HOM05D000509 ORTHO05D006393 4.2e-10 67.8 71 53.5
Aqoxy2G02281 Aquilegia oxysepala HOM05D000509 ORTHO05D006393 7.2e-10 67.0 72 48.6
C08p36230 Brassica napus HOM05D000509 ORTHO05D006393 7.2e-10 67.0 71 49.3
BolC8t51205H Brassica oleracea HOM05D000509 ORTHO05D006393 7.2e-10 67.0 71 49.3
PGR042G3203 Punica granatum HOM05D000509 ORTHO05D006393 7.2e-10 67.0 56 60.7
Nn6g33420 Nelumbo nucifera HOM05D000509 ORTHO05D006393 1.2e-09 66.2 72 54.2
Thhalv10006311m.g Eutrema salsugineum HOM05D000509 ORTHO05D006393 1.6e-09 65.9 56 57.1
FvH4_7g14280 Fragaria vesca HOM05D000509 ORTHO05D006393 1.6e-09 65.9 61 57.4
FAN06G1484 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.6e-09 65.9 61 57.4
FAN06G3105 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.6e-09 65.9 61 57.4
FAN10G1528 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.6e-09 65.9 61 57.4
FAN10G1645 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.6e-09 65.9 61 57.4
MD07G1137000 Malus domestica HOM05D000509 ORTHO05D006393 1.6e-09 65.9 68 52.9
Aa31LG1G27330 Aethionema arabicum HOM05D000509 ORTHO05D006393 2.7e-09 65.1 56 58.9
A09p53420 Brassica napus HOM05D000509 ORTHO05D006393 3.6e-09 64.7 56 57.1
BraA09t40768Z Brassica rapa HOM05D000509 ORTHO05D006393 3.6e-09 64.7 56 57.1
ClCG06G003680 Citrullus lanatus HOM05D000509 ORTHO05D006393 3.6e-09 64.7 61 55.7
Atru.chr5.498 Acer truncatum HOM05D000509 ORTHO05D006393 4.6e-09 64.3 48 64.6
MELO3C021209.2 Cucumis melo HOM05D000509 ORTHO05D006393 4.6e-09 64.3 59 55.9
DCAR_015993 Daucus carota HOM05D000509 ORTHO05D006393 6.1e-09 63.9 53 62.3
MBI17_g24690_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 6.1e-09 63.9 61 54.1
Glyma.09G259300 Glycine max HOM05D000509 ORTHO05D006393 7.9e-09 63.5 68 51.5
Sed0001004 Sechium edule HOM05D000509 ORTHO05D006393 7.9e-09 63.5 63 52.4
FAN03G2840 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.0e-08 63.2 61 55.7
Prupe.1G174800 Prunus persica HOM05D000509 ORTHO05D006393 1.4e-08 62.8 60 58.3
DCAR_019105 Daucus carota HOM05D000509 ORTHO05D006393 1.8e-08 62.4 68 48.5
MD01G1060700 Malus domestica HOM05D000509 ORTHO05D006393 1.8e-08 62.4 63 54.0
Aa31LG5G5170 Aethionema arabicum HOM05D000509 ORTHO05D006393 2.3e-08 62.0 63 50.8
CsaV3_6G000560 Cucumis sativus L. HOM05D000509 ORTHO05D006393 2.3e-08 62.0 59 54.2
Lj1g0015308 Lotus japonicus HOM05D000509 ORTHO05D006393 2.3e-08 62.0 67 55.2
THA.LOC104798540 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 3.9e-08 61.2 56 55.4
MBI17_g24691_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 6.7e-08 60.5 61 49.2
Medtr7g077710 Medicago truncatula HOM05D000509 ORTHO05D006393 6.7e-08 60.5 61 52.5
Sp5g02030 Schrenkiella parvula HOM05D000509 ORTHO05D006393 6.7e-08 60.5 52 57.7
THA.LOC104820589 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 1.5e-07 59.3 64 50.0
CARHR171710 Cardamine hirsuta HOM05D000509 ORTHO05D006393 2.0e-07 58.9 56 51.8
Medtr8g095630 Medicago truncatula HOM05D000509 ORTHO05D006393 2.6e-07 58.5 61 49.2
Lsat_1_v5_gn_8_97941 Lactuca sativa HOM05D002211 ORTHO05D002206 3.3e-07 58.2 68 45.6
MSTRG.20833 Avicennia marina HOM05D000509 ORTHO05D006393 4.4e-07 57.8 70 47.1
FAN01G0359 Fragaria x ananassa HOM05D000509 ORTHO05D006393 4.4e-07 57.8 48 64.6
SalBow6G4776 Salvia bowleyana HOM05D000509 ORTHO05D006393 5.7e-07 57.4 70 41.4
Hund14886 Selenicereus undatus HOM05D000509 ORTHO05D006393 5.7e-07 57.4 63 49.2
BcaC02g10220 Brassica carinata HOM05D000509 ORTHO05D006393 7.4e-07 57.0 56 57.1
C04p31370 Brassica napus HOM05D000509 ORTHO05D006393 7.4e-07 57.0 56 57.1
AT4G07940 Arabidopsis thaliana HOM05D000509 ORTHO05D006393 1.7e-06 55.8 53 52.8
EL10Ac4g09051 Beta vulgaris HOM05D000509 ORTHO05D006393 2.2e-06 55.5 49 53.1
EL10Ac8g20190 Beta vulgaris HOM05D000509 ORTHO05D006393 2.2e-06 55.5 66 43.9
Migut.B01755 Erythranthe guttata HOM05D000509 ORTHO05D006393 2.2e-06 55.5 66 40.9
Nitab4.5_0000583g0080 Nicotiana tabacum HOM05D000509 ORTHO05D006393 2.2e-06 55.5 69 46.4
A04p01140 Brassica napus HOM05D000509 ORTHO05D006393 2.8e-06 55.1 72 45.8
BraA04t15830Z Brassica rapa HOM05D000509 ORTHO05D006393 2.8e-06 55.1 72 45.8
AUR62004883 Chenopodium quinoa HOM05D000509 ORTHO05D006393 2.8e-06 55.1 51 51.0
Nitab4.5_0006762g0030 Nicotiana tabacum HOM05D000509 ORTHO05D006393 2.8e-06 55.1 64 51.6
CANSAT56G2260 Cannabis sativa HOM05D000509 ORTHO05D006393 8.2e-06 53.5 54 55.6
SEGI_38599 Sequoiadendron giganteum HOM05D000509 ORTHO05D006393 8.2e-06 53.5 58 48.3
unitig_0.g1262 Utricularia gibba HOM05D000509 ORTHO05D006393 8.2e-06 53.5 61 49.2


User provided reference genes

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