Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p053294 Quercus lobata HOM05D006255 ORTHO05D008014 6.7e-100 367.9 263 100.0
Ciclev10029213m.g Citrus clementina HOM05D006255 ORTHO05D008014 4.1e-65 252.3 228 73.7
Dinv14143 Davidia involucrata HOM05D006255 ORTHO05D008014 4.1e-65 252.3 228 87.3
Eucgr.I01476 Eucalyptus grandis HOM05D006255 ORTHO05D008014 5.4e-65 251.9 229 75.5
Atru.chr5.3479 Acer truncatum HOM05D006255 ORTHO05D008014 7.0e-65 251.5 228 78.5
Hma1.2p1_0163F.1_g072870 Hydrangea macrophylla HOM05D006255 ORTHO05D008014 1.2e-64 250.8 228 82.9
PGR142G2886 Punica granatum HOM05D006255 ORTHO05D008014 2.7e-64 249.6 228 78.1
Lj9A402T69 Lonicera japonica HOM05D006255 ORTHO05D008014 4.5e-64 248.8 228 71.9
MELO3C013309.2 Cucumis melo HOM05D006255 ORTHO05D008014 5.9e-64 248.4 228 78.1
CsaV3_7G001410 Cucumis sativus L. HOM05D006255 ORTHO05D008014 7.8e-64 248.1 228 74.1
Duzib248G1128 Durio zibethinus HOM05D006255 ORTHO05D008014 1.0e-63 247.7 228 75.0
Manes.11G100600 Manihot esculenta HOM05D006255 ORTHO05D008014 1.0e-63 247.7 228 71.9
Sed0013069 Sechium edule HOM05D006255 ORTHO05D008014 2.9e-63 246.1 228 73.2
Actinidia20544 Actinidia chinensis HOM05D006255 ORTHO05D008014 5.0e-63 245.4 228 72.8
ClCG02G003730 Citrullus lanatus HOM05D006255 ORTHO05D008014 5.0e-63 245.4 227 76.2
vmacro02304 Vaccinium macrocarpon HOM05D006255 ORTHO05D008014 5.0e-63 245.4 229 68.6
Actinidia18024 Actinidia chinensis HOM05D006255 ORTHO05D008014 8.6e-63 244.6 228 79.4
CSS0039919 Camellia sinensis var. sinensis HOM05D006255 ORTHO05D008014 8.6e-63 244.6 229 68.6
Nn5g30887 Nelumbo nucifera HOM05D006255 ORTHO05D008014 1.5e-62 243.8 228 69.3
Potri.009G140200 Populus trichocarpa HOM05D006255 ORTHO05D008014 7.3e-62 241.5 227 78.4
THA.LOC104804084 Tarenaya hassleriana HOM05D006255 ORTHO05D008014 1.6e-61 240.4 228 73.7
TWI31G0945 Tripterygium wilfordii HOM05D006255 ORTHO05D008014 1.6e-61 240.4 228 71.9
CiPaw.05G087400 Carya illinoinensis HOM05D006255 ORTHO05D008014 2.1e-61 240.0 228 87.7
arahy.Tifrunner.gnm1.ann1.K7U5ID Arachis hypogaea HOM05D006255 ORTHO05D008014 4.7e-61 238.8 229 73.4
CANSAT25G2216 Cannabis sativa HOM05D006255 ORTHO05D008014 4.7e-61 238.8 228 85.5
Cfa005320 Carpinus fangiana HOM05D006255 ORTHO05D010524 6.1e-61 238.4 223 82.1
Cc09_g10450 Coffea canephora HOM05D006255 ORTHO05D008014 6.1e-61 238.4 224 78.6
Nitab4.5_0003603g0130 Nicotiana tabacum HOM05D006255 ORTHO05D008014 8.0e-61 238.0 226 77.9
Peaxi162Scf00362g00349 Petunia axillaris HOM05D006255 ORTHO05D008014 1.0e-60 237.7 229 83.0
arahy.Tifrunner.gnm1.ann1.5E63QU Arachis hypogaea HOM05D006255 ORTHO05D008014 1.4e-60 237.3 229 72.9
Sed0016506 Sechium edule HOM05D006255 ORTHO05D008014 1.8e-60 236.9 228 59.6
MSTRG.19958 Avicennia marina HOM05D006255 ORTHO05D008014 2.3e-60 236.5 232 73.7
MSTRG.16938 Avicennia marina HOM05D006255 ORTHO05D008014 8.9e-60 234.6 232 73.7
ECA233G3172 Erigeron canadensis HOM05D006255 ORTHO05D008014 8.9e-60 234.6 227 76.2
TAR625G0439 Trochodendron aralioides HOM05D006255 ORTHO05D008014 1.2e-59 234.2 228 64.0
Gohir.D01G162900 Gossypium hirsutum HOM05D006255 ORTHO05D008014 1.5e-59 233.8 228 72.8
Gorai.002G202100 Gossypium raimondii HOM05D006255 ORTHO05D008014 1.5e-59 233.8 228 72.8
Cpa.g.sc20.136 Carica papaya HOM05D006255 ORTHO05D008014 2.0e-59 233.4 229 76.4
COL.COLO4_18000 Corchorus olitorius HOM05D006255 ORTHO05D008014 2.6e-59 233.0 227 79.3
MBI05_g35101_MAGBIO Magnolia biondii HOM05D006255 ORTHO05D008014 3.4e-59 232.6 227 66.5
Nitab4.5_0001506g0010 Nicotiana tabacum HOM05D006255 ORTHO05D008014 1.3e-58 230.7 228 78.5
Sabra09G0108900 Salix brachista HOM05D006255 ORTHO05D008014 1.7e-58 230.3 265 74.0
Aqoxy5G01073 Aquilegia oxysepala HOM05D006255 ORTHO05D008014 2.4e-57 226.5 229 69.9
Gohir.D12G037200 Gossypium hirsutum HOM05D006255 ORTHO05D008014 4.1e-57 225.7 228 75.9
Gorai.008G038300 Gossypium raimondii HOM05D006255 ORTHO05D008014 4.1e-57 225.7 228 77.2
MD10G1131800 Malus domestica HOM05D006255 ORTHO05D008014 4.1e-57 225.7 228 78.1
EL10Ac9g21307 Beta vulgaris HOM05D006255 ORTHO05D008014 5.4e-57 225.3 229 73.8
Glyma.06G001200 Glycine max HOM05D006255 ORTHO05D008014 5.4e-57 225.3 228 78.5
Lsat_1_v5_gn_8_122201 Lactuca sativa HOM05D006255 ORTHO05D008014 5.4e-57 225.3 224 76.3
Thecc.02G052300 Theobroma cacao HOM05D006255 ORTHO05D008014 5.4e-57 225.3 228 73.7
Gohir.A12G035500 Gossypium hirsutum HOM05D006255 ORTHO05D008014 7.0e-57 224.9 228 68.9
Oeu029013.1 Olea europaea HOM05D006255 ORTHO05D008014 3.5e-56 222.6 227 71.4
Prupe.8G172600 Prunus persica HOM05D006255 ORTHO05D008014 3.5e-56 222.6 228 68.0
ATR0661G177 Amborella trichopoda HOM05D006255 ORTHO05D008014 4.6e-56 222.2 227 67.4
HanXRQChr16g0527781 Helianthus annuus HOM05D006255 ORTHO05D008014 1.0e-55 221.1 228 73.7
Aa31LG7G15760 Aethionema arabicum HOM05D007460 ORTHO05D009396 1.7e-55 220.3 250 69.6
Nitab4.5_0001215g0050 Nicotiana tabacum HOM05D006255 ORTHO05D008014 2.3e-55 219.9 228 78.5
SGA_v2.0_scaffold32G13327 Striga asiatica HOM05D006255 ORTHO05D008014 3.0e-55 219.5 228 75.4
Solyc01g111940.4 Solanum lycopersicum HOM05D006255 ORTHO05D008014 3.9e-55 219.2 232 67.2
PGSC0003DMG401018633 Solanum tuberosum HOM05D006255 ORTHO05D008014 5.0e-55 218.8 224 69.2
Aa31LG9G40 Aethionema arabicum HOM05D006255 ORTHO05D008014 8.6e-55 218.0 246 71.1
BcaB03g14828 Brassica carinata HOM05D006255 ORTHO05D008014 8.6e-55 218.0 227 78.9
Sopen01g053990 Solanum pennellii HOM05D006255 ORTHO05D008014 8.6e-55 218.0 232 66.8
SalBow1G8078 Salvia bowleyana HOM05D006255 ORTHO05D010524 1.9e-54 216.9 232 77.2
Carub.0001s1596 Capsella rubella HOM05D006255 ORTHO05D008014 3.3e-54 216.1 227 70.9
TPR.G38579 Trifolium pratense HOM05D006255 ORTHO05D008014 5.6e-54 215.3 228 75.0
Ah.01g007960 Amaranthus hybridus HOM05D006255 ORTHO05D008014 7.3e-54 214.9 229 75.5
Glyma.04G001700 Glycine max HOM05D006255 ORTHO05D008014 7.3e-54 214.9 228 78.9
Os04g0561600 Oryza sativa ssp. japonica HOM05D006255 ORTHO05D008014 6.2e-53 211.8 231 62.3
Lalb_Chr08g0246771 Lupinus albus HOM05D006255 ORTHO05D008014 8.0e-53 211.5 232 74.6
MD05G1128500 Malus domestica HOM05D006255 ORTHO05D008014 8.0e-53 211.5 228 77.6
AL1G28330 Arabidopsis lyrata HOM05D006255 ORTHO05D008014 1.4e-52 210.7 233 68.7
Psat5g000920 Pisum sativum HOM05D006255 ORTHO05D008014 4.0e-52 209.1 227 75.3
unitig_0.g812 Utricularia gibba HOM05D006255 ORTHO05D008014 6.8e-52 208.4 224 70.5
PSO675G3819 Papaver somniferum HOM05D006255 ORTHO05D008014 2.6e-51 206.5 228 73.2
Nitab4.5_0001629g0040 Nicotiana tabacum HOM05D006255 ORTHO05D008014 9.8e-51 204.5 228 71.1
Medtr3g118350 Medicago truncatula HOM05D006255 ORTHO05D008014 1.3e-50 204.1 228 64.0
PSO541G1652 Papaver somniferum HOM05D006255 ORTHO05D008014 1.3e-50 204.1 228 76.3
Zm00001eb074070 Zea mays HOM05D006255 ORTHO05D008014 1.4e-49 200.7 233 70.8
CDE02G2216 Ceratophyllum demersum HOM05D006255 ORTHO05D008014 2.4e-49 199.9 228 65.8
Nn6g31846 Nelumbo nucifera HOM05D006255 ORTHO05D008014 4.1e-49 199.1 228 64.0
Lj4g0004587 Lotus japonicus HOM05D006255 ORTHO05D008014 1.6e-48 197.2 229 71.2
Phvul.009G117000 Phaseolus vulgaris HOM05D006255 ORTHO05D008014 1.7e-47 193.7 228 61.8
RcHm_v2.0_Chr6g0279491 Rosa chinensis HOM05D006255 ORTHO05D008014 2.3e-47 193.4 227 75.8
FAN27G1328 Fragaria x ananassa HOM05D006255 ORTHO05D008014 3.0e-47 193.0 234 73.1
Ca_15278_v3 Cicer arietinum L. HOM05D006255 ORTHO05D008014 3.9e-47 192.6 228 73.7
FAN24G2083 Fragaria x ananassa HOM05D006255 ORTHO05D008014 3.9e-47 192.6 237 72.6
C06p44610 Brassica napus HOM05D002002 ORTHO05D008711 1.1e-46 191.0 230 76.1
FAN15G2553 Fragaria x ananassa HOM05D006255 ORTHO05D008014 1.1e-46 191.0 227 71.4
FvH4_2g15950 Fragaria vesca HOM05D006255 ORTHO05D008014 1.5e-46 190.7 227 74.9
BolC6t39525H Brassica oleracea HOM05D006255 ORTHO05D008014 7.3e-46 188.3 227 76.2
CARHR016680 Cardamine hirsuta HOM05D006255 ORTHO05D008014 1.2e-45 187.6 227 67.4
A07p37050 Brassica napus HOM05D002002 ORTHO05D008711 1.6e-45 187.2 230 75.7
BraA07t31267Z Brassica rapa HOM05D006255 ORTHO05D008014 4.7e-45 185.7 227 76.2
Mapoly0058s0055 Marchantia polymorpha HOM05D006255 ORTHO05D008014 4.7e-45 185.7 227 60.8
Os03g0131800 Oryza sativa ssp. japonica HOM05D006255 ORTHO05D008014 6.2e-45 185.3 231 64.9
Duzib132G0230 Durio zibethinus HOM05D006255 ORTHO05D008014 2.3e-44 183.3 228 76.3
Pp3c11_730 Physcomitrium patens HOM05D006255 ORTHO05D008014 2.3e-44 183.3 229 64.6
Sc08g0002620 Simmondsia chinensis HOM05D006255 ORTHO05D008014 2.3e-44 183.3 227 63.0
AT1G16210 Arabidopsis thaliana HOM05D006255 ORTHO05D008014 6.8e-44 181.8 227 62.1
AUR62009986 Chenopodium quinoa HOM05D006255 ORTHO05D008014 1.5e-43 180.6 227 61.2
Pp3c11_731 Physcomitrium patens HOM05D006255 ORTHO05D008014 2.0e-43 180.3 229 64.2
BcaB03g14827 Brassica carinata HOM05D002002 ORTHO05D008711 1.7e-42 177.2 230 70.9
Gohir.A01G171900 Gossypium hirsutum HOM05D006255 ORTHO05D008014 2.2e-42 176.8 150 65.3
AagrBONN_evm.TU.Sc2ySwM_368.1212 Anthoceros agrestis HOM05D006255 ORTHO05D008014 4.9e-42 175.6 229 58.5
HPP92_022389 Vanilla planifolia HOM05D006255 ORTHO05D008014 1.1e-41 174.5 224 48.2
HPP92_025891 Vanilla planifolia HOM05D006255 ORTHO05D008014 2.4e-41 173.3 236 49.6
CBR_g61263 Chara braunii HOM05D006255 ORTHO05D008014 7.1e-41 171.8 233 49.4
VMungo1309G1654 Vigna mungo HOM05D006255 ORTHO05D008014 1.6e-40 170.6 228 68.4
SMO119G0083 Selaginella moellendorffii HOM05D006255 ORTHO05D008014 4.6e-40 169.1 231 45.0
Lj5C174T15 Lonicera japonica HOM05D006255 ORTHO05D008014 7.8e-40 168.3 229 69.0
Sp4g00050 Schrenkiella parvula HOM05D006255 ORTHO05D008014 1.0e-39 167.9 228 63.2
Pp3c7_26990 Physcomitrium patens HOM05D006255 ORTHO05D008014 2.8e-37 159.8 229 52.8
Ah.01g023450 Amaranthus hybridus HOM05D000939 ORTHO05D000745 1.4e-36 157.5 212 69.3
Haze_02065 Corylus avellana HOM05D006255 ORTHO05D008014 2.4e-36 156.8 187 76.5
CDE09G0466 Ceratophyllum demersum HOM05D006255 ORTHO05D008014 4.9e-34 149.1 91 75.8
CAN.G1235.32 Capsicum annuum HOM05D006255 ORTHO05D008014 2.0e-27 127.1 189 59.3
AUR62012975 Chenopodium quinoa HOM05D006255 ORTHO05D008014 4.9e-26 122.5 227 47.1
GSVIVG01023898001 Vitis vinifera HOM05D006255 ORTHO05D008014 1.9e-25 120.6 63 87.3
Gohir.A03G206650 Gossypium hirsutum HOM05D006255 ORTHO05D008014 5.4e-25 119.0 232 40.5
C06p36040 Brassica napus HOM05D006255 ORTHO05D008014 6.0e-24 115.5 71 78.9
BolC6t38725H Brassica oleracea HOM05D006255 ORTHO05D008014 5.1e-23 112.5 67 80.6
Gorai.005G255900 Gossypium raimondii HOM05D006255 ORTHO05D008014 5.6e-22 109.0 232 38.4
Peaxi162Scf00875g00037 Petunia axillaris HOM05D006255 ORTHO05D008014 4.8e-21 105.9 92 57.6
Cre14.g629500 Chlamydomonas reinhardtii HOM05D006255 ORTHO05D008014 6.0e-16 89.0 223 35.0
PRCOL_00005063 Prasinoderma coloniale HOM05D006255 ORTHO05D008014 3.3e-14 83.2 227 31.3
Migut.H01073 Erythranthe guttata HOM05D006255 ORTHO05D008014 9.6e-14 81.6 220 39.1
BcaC08g45811 Brassica carinata HOM05D006255 ORTHO05D008014 1.1e-09 68.2 40 80.0
MCO11G585 Micromonas commoda HOM05D006255 ORTHO05D008014 1.9e-09 67.4 92 43.5
Cfa024524 Carpinus fangiana HOM05D006255 ORTHO05D008014 1.9e-06 57.4 80 40.0


User provided reference genes

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