Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p052661 Quercus lobata HOM05D004598 ORTHO05D005550 3.1e-246 854.7 454 100.0
FAN27G3211 Fragaria x ananassa HOM05D004598 ORTHO05D005550 6.9e-177 624.4 454 67.8
FAN15G2177 Fragaria x ananassa HOM05D004598 ORTHO05D005550 7.6e-176 620.9 454 67.6
FvH4_2g15820 Fragaria vesca HOM05D004598 ORTHO05D005550 9.9e-176 620.5 450 68.2
RcHm_v2.0_Chr6g0279191 Rosa chinensis HOM05D004598 ORTHO05D005550 7.9e-173 610.9 451 66.5
Prupe.8G170900 Prunus persica HOM05D004598 ORTHO05D005550 4.3e-171 605.1 451 66.7
MELO3C013319.2 Cucumis melo HOM05D004598 ORTHO05D005550 1.4e-169 600.1 449 66.1
MD05G1127200 Malus domestica HOM05D004598 ORTHO05D005550 4.0e-169 598.6 451 66.5
ClCG02G003800 Citrullus lanatus HOM05D004598 ORTHO05D005550 9.9e-168 594.0 452 66.4
CsaV3_7G001350 Cucumis sativus L. HOM05D004598 ORTHO05D005550 4.9e-167 591.7 449 65.5
TAR624G0541 Trochodendron aralioides HOM05D004598 ORTHO05D005550 1.8e-164 583.2 452 63.9
Ciclev10001079m.g Citrus clementina HOM05D004598 ORTHO05D005550 5.1e-164 581.6 450 71.1
Atru.chr3.3248 Acer truncatum HOM05D004598 ORTHO05D005550 9.0e-161 570.9 452 63.3
CSS0038935 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 7.6e-160 567.8 444 62.4
CSS0039662 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 7.6e-160 567.8 444 62.4
MBI19_g29897_MAGBIO Magnolia biondii HOM05D004598 ORTHO05D005550 6.5e-159 564.7 458 63.3
MBI02_g31690_MAGBIO Magnolia biondii HOM05D004598 ORTHO05D005550 2.5e-158 562.8 458 62.9
Manes.14G169500 Manihot esculenta HOM05D004598 ORTHO05D005550 2.5e-158 562.8 444 62.8
Lj3g0020284 Lotus japonicus HOM05D004598 ORTHO05D005550 2.1e-157 559.7 456 61.0
Aqoxy6G02901 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 3.5e-157 558.9 450 61.8
TPR.G8530 Trifolium pratense HOM05D004598 ORTHO05D005550 3.5e-157 558.9 451 61.6
CSS0010665 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 6.0e-157 558.1 444 61.5
VMungo1080G1126 Vigna mungo HOM05D004598 ORTHO05D005550 6.0e-157 558.1 453 61.8
Potri.001G031500 Populus trichocarpa HOM05D004598 ORTHO05D005550 1.3e-156 557.0 447 61.3
Aqoxy3G01530 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 1.8e-156 556.6 450 61.6
Aqoxy3G00619 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 2.3e-156 556.2 450 67.6
Sabra01G0022600 Salix brachista HOM05D004598 ORTHO05D005550 2.3e-156 556.2 447 61.3
Lalb_Chr01g0007411 Lupinus albus HOM05D004598 ORTHO05D005550 3.9e-156 555.4 457 60.6
Actinidia02429 Actinidia chinensis HOM05D004598 ORTHO05D005550 6.7e-156 554.7 437 62.9
Rhsim11G0148800 Rhododendron simsii HOM05D004598 ORTHO05D005550 6.7e-156 554.7 451 66.5
CiPaw.13G015900 Carya illinoinensis HOM05D004598 ORTHO05D005550 1.1e-155 553.9 457 62.1
Sopen02g028050 Solanum pennellii HOM05D004598 ORTHO05D005550 1.1e-155 553.9 440 62.0
SalBow6G7131 Salvia bowleyana HOM05D004598 ORTHO05D005550 1.9e-155 553.1 443 61.9
CARHR191400 Cardamine hirsuta HOM05D004598 ORTHO05D005550 2.5e-155 552.7 451 61.9
Ca_23979_v3 Cicer arietinum L. HOM05D004598 ORTHO05D005550 2.5e-155 552.7 451 61.0
Aqoxy3G01523 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 3.3e-155 552.4 442 61.5
Solyc02g083260.3 Solanum lycopersicum HOM05D004598 ORTHO05D005550 7.4e-155 551.2 454 60.6
Phvul.005G043300 Phaseolus vulgaris HOM05D004598 ORTHO05D005550 1.3e-154 550.4 456 61.0
Sc16g0001780 Simmondsia chinensis HOM05D004598 ORTHO05D005550 1.6e-154 550.1 446 60.1
THA.LOC104799567 Tarenaya hassleriana HOM05D004598 ORTHO05D005550 1.6e-154 550.1 450 62.0
AT5G22130 Arabidopsis thaliana HOM05D004598 ORTHO05D005550 4.8e-154 548.5 463 60.9
Cc07_g11450 Coffea canephora HOM05D004598 ORTHO05D005550 6.3e-154 548.1 440 60.7
Ah.03g134220 Amaranthus hybridus HOM05D004598 ORTHO05D005550 8.2e-154 547.7 444 60.6
Hma1.2p1_0315F.1_g122700 Hydrangea macrophylla HOM05D004598 ORTHO05D005550 8.2e-154 547.7 437 62.0
PSO675G4488 Papaver somniferum HOM05D004598 ORTHO05D005550 8.2e-154 547.7 493 58.8
PGSC0003DMG400001580 Solanum tuberosum HOM05D004598 ORTHO05D005550 8.2e-154 547.7 437 61.8
Medtr8g040610 Medicago truncatula HOM05D004598 ORTHO05D005550 1.1e-153 547.4 442 61.5
SalBow2G2153 Salvia bowleyana HOM05D004598 ORTHO05D005550 1.1e-153 547.4 443 61.2
AL6G33110 Arabidopsis lyrata HOM05D004598 ORTHO05D005550 1.4e-153 547.0 451 61.6
Carub.0006s1977 Capsella rubella HOM05D004598 ORTHO05D005550 1.8e-153 546.6 450 61.8
Gohir.D07G082500 Gossypium hirsutum HOM05D004598 ORTHO05D005550 1.8e-153 546.6 433 62.6
Gorai.001G088100 Gossypium raimondii HOM05D004598 ORTHO05D005550 1.8e-153 546.6 433 62.6
PGR004G0790 Punica granatum HOM05D004598 ORTHO05D005550 2.4e-153 546.2 445 60.9
Thecc.04G114500 Theobroma cacao HOM05D004598 ORTHO05D005550 3.1e-153 545.8 437 61.8
Thhalv10013575m.g Eutrema salsugineum HOM05D004598 ORTHO05D005550 4.1e-153 545.4 443 62.3
CAN.G890.18 Capsicum annuum HOM05D004598 ORTHO05D005550 5.3e-153 545.0 449 60.4
TWI18G0003 Tripterygium wilfordii HOM05D004598 ORTHO05D005550 2.0e-152 543.1 451 60.3
BcaC03g13863 Brassica carinata HOM05D004598 ORTHO05D005550 7.6e-152 541.2 450 61.6
vmacro20477 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 7.6e-152 541.2 450 60.2
Gohir.A07G077700 Gossypium hirsutum HOM05D004598 ORTHO05D005550 1.0e-151 540.8 434 61.8
Peaxi162Scf00300g00120 Petunia axillaris HOM05D004598 ORTHO05D005550 1.3e-151 540.4 448 59.6
AUR62026210 Chenopodium quinoa HOM05D004598 ORTHO05D005550 1.7e-151 540.0 447 58.8
Sp6g23050 Schrenkiella parvula HOM05D004598 ORTHO05D005550 2.2e-151 539.7 436 61.9
MSTRG.2598 Avicennia marina HOM05D004598 ORTHO05D005550 3.8e-151 538.9 451 59.9
COL.COLO4_05992 Corchorus olitorius HOM05D004598 ORTHO05D005550 3.8e-151 538.9 436 61.0
Migut.H02299 Erythranthe guttata HOM05D004598 ORTHO05D005550 5.0e-151 538.5 446 61.7
C02p10690 Brassica napus HOM05D004598 ORTHO05D005550 6.5e-151 538.1 450 62.0
HanXRQChr03g0066861 Helianthus annuus HOM05D004598 ORTHO05D005550 1.4e-150 537.0 436 60.1
Nitab4.5_0004259g0040 Nicotiana tabacum HOM05D004598 ORTHO05D005550 2.5e-150 536.2 486 55.8
Aa31LG1G13300 Aethionema arabicum HOM05D004598 ORTHO05D005550 7.2e-150 534.6 443 59.8
BcaB05g22747 Brassica carinata HOM05D004598 ORTHO05D005550 9.3e-150 534.3 450 61.1
Glyma.08G159600 Glycine max HOM05D004598 ORTHO05D005550 9.3e-150 534.3 453 60.9
BolC2t07140H Brassica oleracea HOM05D004598 ORTHO05D005550 1.2e-149 533.9 450 62.0
BraA02t05641Z Brassica rapa HOM05D004598 ORTHO05D005550 2.1e-149 533.1 450 61.3
Hund05921 Selenicereus undatus HOM05D004598 ORTHO05D005550 1.8e-148 530.0 450 57.1
Duzib133G0026 Durio zibethinus HOM05D004598 ORTHO05D005550 1.3e-146 523.9 477 56.8
GSVIVG01017167001 Vitis vinifera HOM05D004598 ORTHO05D005550 2.2e-146 523.1 419 63.5
Cpa.g.sc9.382 Carica papaya HOM05D004598 ORTHO05D005550 1.4e-145 520.4 473 56.9
Eucgr.H00040 Eucalyptus grandis HOM05D004598 ORTHO05D005550 2.4e-145 519.6 447 59.1
Dinv08542 Davidia involucrata HOM05D004598 ORTHO05D005550 2.0e-144 516.5 409 66.5
ATR0165G018 Amborella trichopoda HOM05D004598 ORTHO05D005550 1.3e-143 513.8 455 57.6
AUR62026384 Chenopodium quinoa HOM05D004598 ORTHO05D005550 8.5e-143 511.1 381 63.8
Sed0007699 Sechium edule HOM05D004598 ORTHO05D005550 4.7e-141 505.4 358 70.9
Medtr1g058230 Medicago truncatula HOM05D004598 ORTHO05D005550 1.4e-137 493.8 430 59.1
HanXRQChr14g0454151 Helianthus annuus HOM05D004598 ORTHO05D005550 3.1e-137 492.7 409 59.4
HPP92_002259 Vanilla planifolia HOM05D004598 ORTHO05D005550 6.1e-133 478.4 387 62.5
Cfa010950 Carpinus fangiana HOM05D006110 ORTHO05D007774 3.3e-131 472.6 350 66.6
Haze_02994 Corylus avellana HOM05D006110 ORTHO05D007774 7.4e-131 471.5 436 56.2
Hma1.2p1_0315F.1_g122690 Hydrangea macrophylla HOM05D004598 ORTHO05D005550 1.7e-130 470.3 356 65.4
SEGI_01084 Sequoiadendron giganteum HOM05D004598 ORTHO05D005550 1.2e-128 464.2 378 61.6
EL10Ac6g13343 Beta vulgaris HOM05D004598 ORTHO05D005550 2.9e-127 459.5 449 53.0
TPR.G6064 Trifolium pratense HOM05D004598 ORTHO05D005550 8.5e-127 458.0 451 53.7
BcaC07g41302 Brassica carinata HOM05D004598 ORTHO05D005550 2.5e-126 456.4 415 57.3
BolC8t51865H Brassica oleracea HOM05D004598 ORTHO05D005550 4.2e-126 455.7 441 55.6
Os03g0670200 Oryza sativa ssp. japonica HOM05D004598 ORTHO05D005550 7.2e-126 454.9 449 57.9
arahy.Tifrunner.gnm1.ann1.B5R5MF Arachis hypogaea HOM05D004598 ORTHO05D005550 5.2e-124 448.7 352 64.2
arahy.Tifrunner.gnm1.ann1.K5F1ZR Arachis hypogaea HOM05D004598 ORTHO05D005550 6.7e-124 448.4 350 64.6
arahy.Tifrunner.gnm1.ann1.PEW2A9 Arachis hypogaea HOM05D004598 ORTHO05D005550 2.1e-117 426.8 359 61.6
Oeu046543.3 Olea europaea HOM05D004598 ORTHO05D005550 6.1e-117 425.2 409 55.5
Mapoly0079s0001 Marchantia polymorpha HOM05D004598 ORTHO05D005550 4.8e-114 415.6 437 50.8
AagrBONN_evm.TU.Sc2ySwM_368.2499 Anthoceros agrestis HOM05D004598 ORTHO05D005550 2.3e-111 406.8 439 51.7
Nitab4.5_0001696g0090 Nicotiana tabacum HOM05D004598 ORTHO05D005550 7.2e-110 401.7 420 50.7
DCAR_027631 Daucus carota HOM05D004598 ORTHO05D005550 6.1e-109 398.7 328 60.1
Lj2A487T63 Lonicera japonica HOM05D004598 ORTHO05D005550 5.2e-108 395.6 449 49.0
CDE02G1977 Ceratophyllum demersum HOM05D004598 ORTHO05D005550 1.1e-105 387.9 370 53.8
Pp3c1_29840 Physcomitrium patens HOM05D004598 ORTHO05D005550 6.6e-103 378.6 433 46.7
SMO118G0414 Selaginella moellendorffii HOM05D004598 ORTHO05D005550 2.3e-100 370.2 425 46.8
SGA_v2.0_scaffold195G40853 Striga asiatica HOM05D004598 ORTHO05D003143 6.4e-98 362.1 339 53.4
arahy.Tifrunner.gnm1.ann1.BN9D0T Arachis hypogaea HOM05D004598 ORTHO05D005550 3.6e-93 346.3 440 52.3
unitig_736.g22586 Utricularia gibba HOM05D004598 ORTHO05D005550 3.4e-91 339.7 286 58.0
CBR_g41686 Chara braunii HOM05D004598 ORTHO05D005550 1.3e-87 327.8 590 35.9
vmacro22733 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 1.1e-86 324.7 450 42.7
Gohir.A11G320400 Gossypium hirsutum HOM05D004598 ORTHO05D005550 1.2e-85 321.2 379 48.0
Migut.H02295 Erythranthe guttata HOM05D004598 ORTHO05D005550 4.7e-85 319.3 363 49.3
ECA240G3480 Erigeron canadensis HOM05D004598 ORTHO05D005550 1.2e-80 304.7 222 63.1
Migut.H02297 Erythranthe guttata HOM05D004598 ORTHO05D005550 2.5e-78 297.0 286 54.5
C08p43090 Brassica napus HOM05D004598 ORTHO05D005550 7.3e-78 295.4 268 56.3
FAN20G2148 Fragaria x ananassa HOM05D004598 ORTHO05D005550 7.6e-75 285.4 451 38.4
MD10G1130600 Malus domestica HOM05D004598 ORTHO05D005550 2.9e-74 283.5 232 61.2
Manes.07G140750 Manihot esculenta HOM05D004598 ORTHO05D005550 2.7e-72 276.9 282 53.2
CSS0036727 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 8.7e-71 271.9 244 55.3
Nn2g12459 Nelumbo nucifera HOM05D004598 ORTHO05D005550 9.0e-68 261.9 152 78.9
CSS0012948 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 5.8e-67 259.2 156 75.0
Zm00001eb096280 Zea mays HOM05D004598 ORTHO05D005550 9.3e-65 251.9 218 59.2
SHI34561 Sapria himalayana HOM05D004598 ORTHO05D005550 1.3e-63 248.1 446 35.4
BNapus_Darmor_BZH_scaffold_38p00840 Brassica napus HOM05D004598 ORTHO05D005550 1.7e-63 247.7 147 79.6
Thhalv10015361m.g Eutrema salsugineum HOM05D004598 ORTHO05D005550 1.1e-62 245.0 236 54.7
Rhsim11G0028900 Rhododendron simsii HOM05D004598 ORTHO05D005550 1.6e-61 241.1 379 39.1
Psat6g012400 Pisum sativum HOM05D004598 ORTHO05D005550 2.8e-61 240.4 149 74.5
Lsat_1_v5_gn_9_118221 Lactuca sativa HOM05D004598 ORTHO05D005550 6.2e-61 239.2 436 35.3
FAN24G1674 Fragaria x ananassa HOM05D004598 ORTHO05D005550 2.6e-59 233.8 143 77.6
Actinidia00342 Actinidia chinensis HOM05D004598 ORTHO05D005550 4.5e-59 233.0 357 40.1
TAR160G0002 Trochodendron aralioides HOM05D004598 ORTHO05D005550 3.5e-56 223.4 181 61.9
SGA_v2.0_scaffold108G30913 Striga asiatica HOM05D004598 ORTHO05D005550 9.6e-54 215.3 414 34.8
BolC9t58552H Brassica oleracea HOM05D004598 ORTHO05D005550 2.5e-49 200.7 276 46.7
MCO01G023 Micromonas commoda HOM05D004598 ORTHO05D005550 4.2e-49 199.9 364 37.1
Dinv26897 Davidia involucrata HOM05D004598 ORTHO05D005550 7.1e-49 199.1 117 81.2
Cre14.g616200 Chlamydomonas reinhardtii HOM05D004598 ORTHO05D005550 5.6e-46 189.5 295 39.0
Cfa027243 Carpinus fangiana HOM05D004598 ORTHO05D005550 1.1e-44 185.3 391 35.8
MD10G1130700 Malus domestica HOM05D004598 ORTHO05D005550 2.4e-36 157.5 144 56.9
vmacro01928 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 8.8e-31 139.0 144 53.5
Lj2E933T1 Lonicera japonica HOM05D004598 ORTHO05D005550 9.7e-30 135.6 90 71.1
vmacro20475 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 2.2e-29 134.4 90 67.8
vmacro22736 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 2.2e-29 134.4 90 67.8
MELO3C010621.2 Cucumis melo HOM05D004598 ORTHO05D005550 3.7e-29 133.7 94 67.0
BcaB01g04740 Brassica carinata HOM05D004598 ORTHO05D005550 2.6e-27 127.5 89 74.2
Rhsim09G0084000 Rhododendron simsii HOM05D004598 ORTHO05D005550 2.0e-22 111.3 72 73.6
PRCOL_00005536 Prasinoderma coloniale HOM05D004598 ORTHO05D005550 1.1e-17 95.5 418 24.9
SHI43372 Sapria himalayana HOM05D004598 ORTHO05D005550 1.8e-15 88.2 117 43.6
SHI44717 Sapria himalayana HOM05D004598 ORTHO05D005550 5.2e-15 86.7 108 50.0
CAN.G890.17 Capsicum annuum HOM05D004598 ORTHO05D005550 2.0e-11 74.7 65 52.3
SHI39035 Sapria himalayana HOM05D004598 ORTHO05D005550 1.3e-10 72.0 50 68.0
SHI47796 Sapria himalayana HOM05D004598 ORTHO05D005550 1.1e-09 68.9 50 62.0
Medtr6g051670 Medicago truncatula HOM05D004598 ORTHO05D005550 7.2e-09 66.2 43 60.5


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