Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p052437 Quercus lobata HOM05D007970 ORTHO05D009943 1.4e-92 343.2 208 100.0
CiPaw.05G085600 Carya illinoinensis HOM05D007970 ORTHO05D009943 5.8e-38 161.8 150 59.3
Haze_02097 Corylus avellana HOM05D007970 ORTHO05D009943 1.3e-34 150.6 140 56.4
Cfa005290 Carpinus fangiana HOM05D007970 ORTHO05D009943 2.3e-34 149.8 140 56.4
Thecc.02G055100 Theobroma cacao HOM05D007970 ORTHO05D009943 5.1e-34 148.7 182 49.5
COL.COLO4_36729 Corchorus olitorius HOM05D007970 ORTHO05D009943 4.7e-32 142.1 183 50.3
Duzib248G1052 Durio zibethinus HOM05D007970 ORTHO05D009943 2.4e-31 139.8 162 51.9
MD10G1128300 Malus domestica HOM05D007970 ORTHO05D009943 3.1e-31 139.4 137 55.5
Prupe.8G169400 Prunus persica HOM05D007970 ORTHO05D009943 2.9e-29 132.9 136 56.6
RcHm_v2.0_Chr6g0278991 Rosa chinensis HOM05D007970 ORTHO05D009943 1.4e-28 130.6 140 53.6
TWI31G1200 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 6.0e-27 125.2 161 49.1
FAN15G0059 Fragaria x ananassa HOM05D007970 ORTHO05D009943 1.1e-25 120.9 135 52.6
FAN20G1196 Fragaria x ananassa HOM05D007970 ORTHO05D009943 1.1e-25 120.9 135 52.6
FAN27G0083 Fragaria x ananassa HOM05D007970 ORTHO05D009943 1.9e-25 120.2 135 51.9
FvH4_2g15690 Fragaria vesca HOM05D007970 ORTHO05D009943 5.6e-25 118.6 135 51.9
FAN24G2575 Fragaria x ananassa HOM05D007970 ORTHO05D009943 5.6e-25 118.6 135 51.9
Gohir.A03G206000 Gossypium hirsutum HOM05D007970 ORTHO05D009943 9.6e-25 117.9 149 55.7
TWI75G1150 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 1.4e-23 114.0 147 44.9
Gorai.005G255300 Gossypium raimondii HOM05D007970 ORTHO05D009943 2.4e-23 113.2 171 50.9
Gohir.D02G227400 Gossypium hirsutum HOM05D007970 ORTHO05D009943 6.9e-23 111.7 171 50.3
Manes.04G070700 Manihot esculenta HOM05D007970 ORTHO05D009943 1.7e-21 107.1 142 47.9
Potri.004G178101 Populus trichocarpa HOM05D007970 ORTHO05D009943 3.2e-20 102.8 156 44.2
Ciclev10030163m.g Citrus clementina HOM05D007970 ORTHO05D009943 7.1e-20 101.7 167 43.1
Dinv41914 Davidia involucrata HOM05D007970 ORTHO05D009943 9.3e-20 101.3 178 42.1
Gohir.D04G168500 Gossypium hirsutum HOM05D007970 ORTHO05D009943 7.8e-19 98.2 178 41.0
Gorai.012G156800 Gossypium raimondii HOM05D007970 ORTHO05D009943 5.1e-18 95.5 178 40.4
Gohir.A04G131900 Gossypium hirsutum HOM05D007970 ORTHO05D009943 1.5e-17 94.0 178 39.9
Cpa.g.sc20.116 Carica papaya HOM05D007970 ORTHO05D009943 1.9e-17 93.6 116 49.1
Manes.11G099100 Manihot esculenta HOM05D007970 ORTHO05D009943 4.3e-17 92.4 120 48.3
Sabra04G0119900 Salix brachista HOM05D007970 ORTHO05D009943 1.6e-16 90.5 140 44.3
Gohir.D01G161700 Gossypium hirsutum HOM05D007970 ORTHO05D009943 2.1e-16 90.1 138 40.6
Gorai.002G200600 Gossypium raimondii HOM05D007970 ORTHO05D009943 2.1e-16 90.1 138 40.6
TAR376G1232 Trochodendron aralioides HOM05D007970 ORTHO05D009943 2.1e-16 90.1 138 42.0
CSS0030284 Camellia sinensis var. sinensis HOM05D007970 ORTHO05D009943 8.1e-16 88.2 141 47.5
Actinidia21480 Actinidia chinensis HOM05D007970 ORTHO05D009943 2.4e-15 86.7 150 39.3
Atru.chr5.3444 Acer truncatum HOM05D007970 ORTHO05D009943 2.6e-14 83.2 175 37.7
Gohir.A01G170700 Gossypium hirsutum HOM05D007970 ORTHO05D009943 2.6e-14 83.2 119 45.4
Rhsim05G0052900 Rhododendron simsii HOM05D007970 ORTHO05D009943 2.9e-13 79.7 153 38.6
Hma1.2p1_0032F.1_g019140 Hydrangea macrophylla HOM05D007970 ORTHO05D009943 3.8e-13 79.3 117 43.6
vmacro17329 Vaccinium macrocarpon HOM05D007970 ORTHO05D009943 4.9e-13 79.0 120 41.7
Dinv14128 Davidia involucrata HOM05D007970 ORTHO05D009943 1.4e-12 77.4 113 45.1
Actinidia14361 Actinidia chinensis HOM05D007970 ORTHO05D009943 4.2e-12 75.9 121 39.7
Actinidia18037 Actinidia chinensis HOM05D007970 ORTHO05D009943 7.1e-12 75.1 127 40.2
CANSAT25G3784 Cannabis sativa HOM05D007970 ORTHO05D009943 2.1e-11 73.6 157 34.4
Rhsim11G0193700 Rhododendron simsii HOM05D007970 ORTHO05D009943 2.7e-11 73.2 122 36.9
ClCG02G012110 Citrullus lanatus HOM05D007970 ORTHO05D009943 7.9e-11 71.6 133 39.8
MELO3C034691.2 Cucumis melo HOM05D007970 ORTHO05D009943 1.8e-10 70.5 138 40.6
Nitab4.5_0013642g0020 Nicotiana tabacum HOM05D007970 ORTHO05D009943 2.3e-10 70.1 109 42.2
Nn5g30844 Nelumbo nucifera HOM05D007970 ORTHO05D006261 8.7e-10 68.2 117 37.6
Medtr1g112960 Medicago truncatula HOM05D007970 ORTHO05D009943 1.1e-09 67.8 106 41.5
Oeu015553.1 Olea europaea HOM05D007970 ORTHO05D009943 3.3e-09 66.2 115 41.7
Peaxi162Scf00362g00411 Petunia axillaris HOM05D007970 ORTHO05D009943 7.4e-09 65.1 111 37.8
PGSC0003DMG400018628 Solanum tuberosum HOM05D007970 ORTHO05D009943 9.6e-09 64.7 119 37.0
Oeu028958.1 Olea europaea HOM05D007970 ORTHO05D009943 1.3e-08 64.3 94 45.7
Lsat_1_v5_gn_4_72040 Lactuca sativa HOM05D007970 ORTHO05D009943 1.6e-08 63.9 83 48.2
Nn6g34756 Nelumbo nucifera HOM05D006872 ORTHO05D006261 6.2e-08 62.0 95 42.1
Peaxi162Scf00078g00137 Petunia axillaris HOM05D007970 ORTHO05D009943 6.2e-08 62.0 103 38.8
Sc18g0006290 Simmondsia chinensis HOM05D007970 ORTHO05D009943 6.2e-08 62.0 118 44.1
Actinidia20529 Actinidia chinensis HOM05D007970 ORTHO05D009943 1.1e-07 61.2 81 43.2
TAR268G0003 Trochodendron aralioides HOM05D006872 ORTHO05D006261 2.4e-07 60.1 139 34.5
CAN.G588.103 Capsicum annuum HOM05D007970 ORTHO05D009943 6.9e-07 58.5 102 38.2
Nn2g14262 Nelumbo nucifera HOM05D006872 ORTHO05D006261 6.9e-07 58.5 88 45.5
Solyc01g111820.2 Solanum lycopersicum HOM05D007970 ORTHO05D009943 9.0e-07 58.2 115 34.8
TPR.G2416 Trifolium pratense HOM05D062211 ORTHO05D009943 9.0e-07 58.2 121 45.5
Oeu045100.1 Olea europaea HOM05D007970 ORTHO05D009943 2.0e-06 57.0 91 38.5
Sed0017981 Sechium edule HOM05D007970 ORTHO05D009943 2.0e-06 57.0 90 45.6
TAR633G1261 Trochodendron aralioides HOM05D006872 ORTHO05D006261 2.0e-06 57.0 99 40.4
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 2.6e-06 56.6 134 36.6
Lj9P400T40 Lonicera japonica HOM05D007970 ORTHO05D009943 4.5e-06 55.8 186 29.6
Nitab4.5_0000020g0340 Nicotiana tabacum HOM05D006872 ORTHO05D006261 4.5e-06 55.8 81 40.7
Sopen01g053860 Solanum pennellii HOM05D007970 ORTHO05D009943 5.8e-06 55.5 117 36.8
Solyc01g007770.2 Solanum lycopersicum HOM05D006872 ORTHO05D006261 7.6e-06 55.1 81 40.7
Sopen01g003310 Solanum pennellii HOM05D006872 ORTHO05D006261 7.6e-06 55.1 81 40.7
PGSC0003DMG400016417 Solanum tuberosum HOM05D006872 ORTHO05D006261 7.6e-06 55.1 81 40.7


User provided reference genes

Program Settings