Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p052226 Quercus lobata HOM05D000319 ORTHO05D036487 2.0e-79 299.3 178 100.0
QL11p052004 Quercus lobata HOM05D000319 ORTHO05D036487 7.1e-45 184.5 135 93.3
Cpa.g.sc878.1 Carica papaya HOM05D000319 ORTHO05D003924 1.4e-16 90.5 132 63.6
Atru.chr10.1215 Acer truncatum HOM05D000319 ORTHO05D003924 4.1e-16 89.0 124 58.9
CiPaw.10G091300 Carya illinoinensis HOM05D000319 ORTHO05D003924 5.3e-16 88.6 124 52.4
Prupe.4G081400 Prunus persica HOM05D000319 ORTHO05D003924 1.5e-15 87.0 132 57.6
MD10G1261500 Malus domestica HOM05D000319 ORTHO05D003924 3.4e-15 85.9 133 55.6
Manes.15G122100 Manihot esculenta HOM05D000319 ORTHO05D003924 4.5e-15 85.5 131 58.0
Duzib192G0511 Durio zibethinus HOM05D000319 ORTHO05D003924 5.9e-15 85.1 90 62.2
MD05G1283200 Malus domestica HOM05D000319 ORTHO05D003924 1.3e-14 84.0 95 61.1
Ciclev10014310m.g Citrus clementina HOM05D000319 ORTHO05D003924 1.7e-14 83.6 128 49.2
ClCG03G006820 Citrullus lanatus HOM05D000319 ORTHO05D003924 2.2e-14 83.2 131 50.4
TWI53G0954 Tripterygium wilfordii HOM05D000319 ORTHO05D003924 2.2e-14 83.2 130 51.5
COL.COLO4_31063 Corchorus olitorius HOM05D000319 ORTHO05D003924 2.9e-14 82.8 90 62.2
Manes.17G070701 Manihot esculenta HOM05D000319 ORTHO05D003924 6.5e-14 81.6 131 55.0
Potri.004G132900 Populus trichocarpa HOM05D000319 ORTHO05D003924 6.5e-14 81.6 129 55.8
CANSAT35G1549 Cannabis sativa HOM05D000319 ORTHO05D003924 1.9e-13 80.1 95 55.8
MELO3C002738.2 Cucumis melo HOM05D000319 ORTHO05D003924 5.5e-13 78.6 137 56.2
Potri.011G084400 Populus trichocarpa HOM05D000319 ORTHO05D003924 1.2e-12 77.4 129 52.7
Gohir.D10G042300 Gossypium hirsutum HOM05D000319 ORTHO05D003924 2.1e-12 76.6 129 62.0
Gorai.011G044900 Gossypium raimondii HOM05D000319 ORTHO05D003924 2.1e-12 76.6 92 59.8
TWI09G0761 Tripterygium wilfordii HOM05D000319 ORTHO05D003924 2.7e-12 76.3 130 47.7
CsaV3_1G032400 Cucumis sativus L. HOM05D000319 ORTHO05D003924 3.6e-12 75.9 137 56.2
Sabra11G0066900 Salix brachista HOM05D000319 ORTHO05D003924 8.0e-12 74.7 129 51.2
Gohir.A10G041500 Gossypium hirsutum HOM05D000319 ORTHO05D003924 1.0e-11 74.3 130 59.2
Duzib160G0315 Durio zibethinus HOM05D000319 ORTHO05D003924 3.9e-11 72.4 97 59.8
Sabra04G0085100 Salix brachista HOM05D000319 ORTHO05D003924 3.9e-11 72.4 92 59.8
QL11p052007 Quercus lobata HOM05D000319 ORTHO05D012541 5.2e-11 72.0 44 88.6
QL11p052229 Quercus lobata HOM05D000319 ORTHO05D012541 5.2e-11 72.0 44 88.6
Sed0018157 Sechium edule HOM05D000319 ORTHO05D003924 6.7e-11 71.6 129 53.5
Sed0009613 Sechium edule HOM05D000319 ORTHO05D003924 2.6e-10 69.7 127 52.8
GSVIVG01021502001 Vitis vinifera HOM05D000319 ORTHO05D003924 2.6e-10 69.7 92 59.8
Eucgr.E02414 Eucalyptus grandis HOM05D000319 ORTHO05D003924 3.3e-10 69.3 98 54.1
Hund17814 Selenicereus undatus HOM05D000319 ORTHO05D003924 3.3e-10 69.3 94 55.3
PGR042G1498 Punica granatum HOM05D000319 ORTHO05D003924 7.4e-10 68.2 96 54.2
Gohir.A06G137800 Gossypium hirsutum HOM05D000319 ORTHO05D003924 9.7e-10 67.8 129 50.4
Gohir.D06G143000 Gossypium hirsutum HOM05D000319 ORTHO05D003924 9.7e-10 67.8 90 60.0
Gohir.D06G204300 Gossypium hirsutum HOM05D000319 ORTHO05D003924 9.7e-10 67.8 92 58.7
Gorai.010G166800 Gossypium raimondii HOM05D000319 ORTHO05D003924 9.7e-10 67.8 129 50.4
Gohir.A06G196800 Gossypium hirsutum HOM05D000319 ORTHO05D003924 2.8e-09 66.2 92 56.5
Gorai.010G238300 Gossypium raimondii HOM05D000319 ORTHO05D003924 3.7e-09 65.9 92 55.4
Hma1.2p1_0020F.1_g014000 Hydrangea macrophylla HOM05D000319 ORTHO05D003924 8.2e-09 64.7 92 55.4
AUR62002747 Chenopodium quinoa HOM05D000319 ORTHO05D003924 2.4e-08 63.2 92 55.4
Lalb_Chr18g0055391 Lupinus albus HOM05D000319 ORTHO05D003924 3.1e-08 62.8 126 52.4
arahy.Tifrunner.gnm1.ann1.XPBU9Q Arachis hypogaea HOM05D000319 ORTHO05D003924 7.0e-08 61.6 84 50.0
Lalb_Chr20g0117891 Lupinus albus HOM05D000319 ORTHO05D003924 7.0e-08 61.6 125 43.2
Actinidia16707 Actinidia chinensis HOM05D000319 ORTHO05D003924 1.6e-07 60.5 92 53.3
CiPaw.09G122800 Carya illinoinensis HOM05D000319 ORTHO05D003924 1.6e-07 60.5 87 51.7
HanXRQChr04g0114291 Helianthus annuus HOM05D000319 ORTHO05D003924 1.6e-07 60.5 94 51.1
Lj1A1191G70 Lonicera japonica HOM05D000319 ORTHO05D003924 1.6e-07 60.5 88 52.3
arahy.Tifrunner.gnm1.ann1.503TH3 Arachis hypogaea HOM05D000319 ORTHO05D003924 7.7e-07 58.2 84 50.0
Haze_05606 Corylus avellana HOM05D000319 ORTHO05D003924 1.0e-06 57.8 124 50.8
Dinv30756 Davidia involucrata HOM05D000319 ORTHO05D003924 1.0e-06 57.8 102 47.1
Lsat_1_v5_gn_7_28440 Lactuca sativa HOM05D000319 ORTHO05D003924 1.7e-06 57.0 92 50.0
Sopen02g005950 Solanum pennellii HOM05D000319 ORTHO05D003924 2.2e-06 56.6 94 50.0
vmacro10958 Vaccinium macrocarpon HOM05D000319 ORTHO05D003924 2.9e-06 56.2 104 41.3


User provided reference genes

Program Settings