Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p051403 Quercus lobata HOM05D002097 ORTHO05D017202 6.7e-24 115.2 224 100.0
Haze_27451 Corylus avellana HOM05D002097 ORTHO05D017202 8.5e-19 98.2 59 86.4
Cfa005274 Carpinus fangiana HOM05D002097 ORTHO05D002248 1.6e-17 94.0 59 83.1
CiPaw.05G084300 Carya illinoinensis HOM05D002097 ORTHO05D002248 4.3e-15 85.9 59 79.7
CiPaw.06G120700 Carya illinoinensis HOM05D002097 ORTHO05D002248 4.8e-14 82.4 59 76.3
FvH4_2g15540 Fragaria vesca HOM05D002097 ORTHO05D002248 1.5e-12 77.4 59 76.3
FAN15G0394 Fragaria x ananassa HOM05D002097 ORTHO05D002248 1.5e-12 77.4 59 76.3
FAN20G3080 Fragaria x ananassa HOM05D000686 ORTHO05D002248 1.5e-12 77.4 59 76.3
FAN27G2262 Fragaria x ananassa HOM05D000686 ORTHO05D002248 1.5e-12 77.4 59 76.3
GSVIVG01023997001 Vitis vinifera HOM05D002097 ORTHO05D017202 2.6e-12 76.6 58 72.4
FAN24G1581 Fragaria x ananassa HOM05D000686 ORTHO05D000512 1.7e-11 73.9 57 75.4
MD10G1126500 Malus domestica HOM05D002097 ORTHO05D002248 2.9e-11 73.2 59 69.5
CANSAT25G1049 Cannabis sativa HOM05D002097 ORTHO05D002248 5.0e-11 72.4 61 70.5
MD05G1123800 Malus domestica HOM05D002097 ORTHO05D002248 6.5e-11 72.0 59 71.2
Prupe.8G167800 Prunus persica HOM05D002097 ORTHO05D002248 8.5e-11 71.6 59 71.2
Eucgr.I01450 Eucalyptus grandis HOM05D002097 ORTHO05D002248 2.5e-10 70.1 59 66.1
Nn5g30821 Nelumbo nucifera HOM05D002097 ORTHO05D002248 2.5e-10 70.1 59 66.1
Dinv14120 Davidia involucrata HOM05D002097 ORTHO05D002248 1.6e-09 67.4 59 71.2
RcHm_v2.0_Chr6g0278711 Rosa chinensis HOM05D002097 ORTHO05D002248 3.6e-09 66.2 52 71.2
Actinidia20520 Actinidia chinensis HOM05D002097 ORTHO05D002248 4.6e-09 65.9 59 64.4
Lj5C177G7 Lonicera japonica HOM05D002716 ORTHO05D003324 7.9e-09 65.1 57 64.9
Cpa.g.sc20.102 Carica papaya HOM05D002097 ORTHO05D002248 1.4e-08 64.3 54 68.5
TAR381G0974 Trochodendron aralioides HOM05D002097 ORTHO05D002248 1.4e-08 64.3 59 62.7
Migut.B00067 Erythranthe guttata HOM05D002097 ORTHO05D002248 3.9e-08 62.8 59 62.7
CSS0007259 Camellia sinensis var. sinensis HOM05D002097 ORTHO05D002248 6.7e-08 62.0 59 61.0
Rhsim11G0193100 Rhododendron simsii HOM05D002097 ORTHO05D017202 8.8e-08 61.6 59 62.7
Lsat_1_v5_gn_8_123101 Lactuca sativa HOM05D002716 ORTHO05D003324 1.1e-07 61.2 54 64.8
MELO3C013338.2 Cucumis melo HOM05D002097 ORTHO05D002248 1.5e-07 60.8 57 64.9
Sabra09G0106600 Salix brachista HOM05D002097 ORTHO05D002248 1.5e-07 60.8 53 66.0
CsaV3_7G001150 Cucumis sativus L. HOM05D002097 ORTHO05D002248 2.0e-07 60.5 49 71.4
Potri.009G137200 Populus trichocarpa HOM05D002097 ORTHO05D002248 3.3e-07 59.7 50 68.0
HanXRQChr12g0374631 Helianthus annuus HOM05D002097 ORTHO05D002248 4.4e-07 59.3 59 59.3
Ciclev10027985m.g Citrus clementina HOM05D002097 ORTHO05D002248 5.7e-07 58.9 56 64.3
Gohir.D01G001700 Gossypium hirsutum HOM05D002097 ORTHO05D002248 9.7e-07 58.2 53 60.4
Gorai.002G002300 Gossypium raimondii HOM05D002097 ORTHO05D002248 9.7e-07 58.2 53 60.4
TWI75G1869 Tripterygium wilfordii HOM05D002097 ORTHO05D002248 9.7e-07 58.2 55 63.6
EL10Ac9g21352 Beta vulgaris HOM05D002097 ORTHO05D002248 1.3e-06 57.8 40 75.0
AUR62013011 Chenopodium quinoa HOM05D002097 ORTHO05D002248 1.3e-06 57.8 40 75.0
Sed0017736 Sechium edule HOM05D002097 ORTHO05D002248 1.3e-06 57.8 53 64.2
vmacro02285 Vaccinium macrocarpon HOM05D002097 ORTHO05D002248 1.7e-06 57.4 59 59.3
Sed0025364 Sechium edule HOM05D002097 ORTHO05D002248 2.8e-06 56.6 49 69.4
Hund00016 Selenicereus undatus HOM05D002097 ORTHO05D002248 2.8e-06 56.6 53 62.3
TWI31G0624 Tripterygium wilfordii HOM05D002097 ORTHO05D002248 2.8e-06 56.6 61 65.6
Ca_03303_v3 Cicer arietinum L. HOM05D002097 ORTHO05D002248 8.2e-06 55.1 53 60.4


User provided reference genes

Program Settings