Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p050368 Quercus lobata HOM05D002716 ORTHO05D337364 1.8e-47 192.2 93 100.0
Duzib093G1538 Durio zibethinus HOM05D002716 ORTHO05D003324 1.8e-07 59.3 130 34.6
COL.COLO4_26099 Corchorus olitorius HOM05D002716 ORTHO05D003324 2.4e-07 58.9 130 33.8
Duzib116G0707 Durio zibethinus HOM05D002716 ORTHO05D003324 2.4e-07 58.9 130 33.8
Thecc.08G049700 Theobroma cacao HOM05D002716 ORTHO05D003324 4.0e-07 58.2 130 33.8
Gohir.A01G169700 Gossypium hirsutum HOM05D002716 ORTHO05D003324 5.3e-07 57.8 130 34.6
Gohir.D01G160800 Gossypium hirsutum HOM05D002716 ORTHO05D003324 5.3e-07 57.8 130 34.6
Gorai.002G199200 Gossypium raimondii HOM05D002716 ORTHO05D003324 5.3e-07 57.8 130 34.6
vmacro02284 Vaccinium macrocarpon HOM05D002716 ORTHO05D003324 5.3e-07 57.8 130 34.6
Actinidia21467 Actinidia chinensis HOM05D002716 ORTHO05D003324 6.9e-07 57.4 130 34.6
Actinidia32036 Actinidia chinensis HOM05D002716 ORTHO05D003324 6.9e-07 57.4 130 34.6
Actinidia39158 Actinidia chinensis HOM05D002716 ORTHO05D003324 6.9e-07 57.4 130 34.6
CSS0022749 Camellia sinensis var. sinensis HOM05D002716 ORTHO05D003324 6.9e-07 57.4 130 34.6
Gorai.008G037000 Gossypium raimondii HOM05D002716 ORTHO05D003324 6.9e-07 57.4 130 34.6
Oeu015559.3 Olea europaea HOM05D002097 ORTHO05D002248 6.9e-07 57.4 118 35.6
Lsat_1_v5_gn_3_47581 Lactuca sativa HOM05D002716 ORTHO05D003324 9.0e-07 57.0 130 33.8
Sed0016354 Sechium edule HOM05D002716 ORTHO05D003324 9.0e-07 57.0 131 34.4
Atru.chr5.3381 Acer truncatum HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
CANSAT25G0170 Cannabis sativa HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
Cpa.g.sc26.279 Carica papaya HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
Cfa005261 Carpinus fangiana HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
CiPaw.05G083700 Carya illinoinensis HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
CiPaw.06G120800 Carya illinoinensis HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
Ca_15472_v3 Cicer arietinum L. HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
Ciclev10028313m.g Citrus clementina HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
Cc04_g03370 Coffea canephora HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
COL.COLO4_17361 Corchorus olitorius HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
Haze_02123 Corylus avellana HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
DCAR_022816 Daucus carota HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
Dinv14119 Davidia involucrata HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
Dinv41927 Davidia involucrata HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
Duzib132G0164 Durio zibethinus HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
FvH4_2g15510 Fragaria vesca HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
FAN15G1028 Fragaria x ananassa HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
FAN24G2429 Fragaria x ananassa HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
FAN27G2652 Fragaria x ananassa HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
Glyma.06G021600 Glycine max HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
HanXRQChr15g0477921 Helianthus annuus HOM05D002716 ORTHO05D003324 1.5e-06 56.2 132 33.3
HanXRQChr15g0477991 Helianthus annuus HOM05D002716 ORTHO05D003324 1.5e-06 56.2 132 33.3
Hma1.2p1_0032F.1_g019290 Hydrangea macrophylla HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
Lj5C177G7 Lonicera japonica HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
MD05G1123400 Malus domestica HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
MD10G1126400 Malus domestica HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
Medtr3g114480 Medicago truncatula HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
Peaxi162Scf00078g01316 Petunia axillaris HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
Peaxi162Scf00362g00546 Petunia axillaris HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
Psat5g012520 Pisum sativum HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
Prupe.8G167300 Prunus persica HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
Rhsim11G0192900 Rhododendron simsii HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
TPR.G38091 Trifolium pratense HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
VMungo1309G2869 Vigna mungo HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
GSVIVG01024003001 Vitis vinifera HOM05D002716 ORTHO05D003324 1.5e-06 56.2 130 33.8
Actinidia20519 Actinidia chinensis HOM05D002716 ORTHO05D003324 2.0e-06 55.8 130 33.1
ECA233G2788 Erigeron canadensis HOM05D002716 ORTHO05D003324 2.0e-06 55.8 130 33.1
ECA246G3931 Erigeron canadensis HOM05D002716 ORTHO05D003324 2.0e-06 55.8 130 33.1
Eucgr.F03722 Eucalyptus grandis HOM05D002716 ORTHO05D003324 2.0e-06 55.8 130 33.1
Gohir.D12G035700 Gossypium hirsutum HOM05D002716 ORTHO05D003324 2.0e-06 55.8 130 33.8
HanXRQChr17g0544181 Helianthus annuus HOM05D002716 ORTHO05D003324 2.0e-06 55.8 130 33.1
Lsat_1_v5_gn_8_123101 Lactuca sativa HOM05D002716 ORTHO05D003324 2.0e-06 55.8 130 33.1
Sc15g0004720 Simmondsia chinensis HOM05D002716 ORTHO05D003324 2.0e-06 55.8 130 32.3
Zm00001eb039980 Zea mays HOM05D002716 ORTHO05D003324 2.6e-06 55.5 131 32.8
Ah.00g000740 Amaranthus hybridus HOM05D002716 ORTHO05D003324 3.4e-06 55.1 120 33.3
arahy.Tifrunner.gnm1.ann1.8ZA7SM Arachis hypogaea HOM05D002716 ORTHO05D003324 3.4e-06 55.1 130 33.1
arahy.Tifrunner.gnm1.ann1.ZPAF0L Arachis hypogaea HOM05D002716 ORTHO05D003324 3.4e-06 55.1 130 33.1
Cpa.g.sc20.101 Carica papaya HOM05D002716 ORTHO05D003324 3.4e-06 55.1 130 33.1
FAN20G1830 Fragaria x ananassa HOM05D002716 ORTHO05D003324 3.4e-06 55.1 130 33.1
Glyma.14G221600 Glycine max HOM05D002716 ORTHO05D003324 3.4e-06 55.1 130 33.1
Nn5g30817 Nelumbo nucifera HOM05D002716 ORTHO05D003324 3.4e-06 55.1 130 33.1
Phvul.009G019100 Phaseolus vulgaris HOM05D002716 ORTHO05D003324 3.4e-06 55.1 130 33.1
TWI31G1068 Tripterygium wilfordii HOM05D002716 ORTHO05D003324 3.4e-06 55.1 130 33.1
Atru.chr13.234 Acer truncatum HOM05D002716 ORTHO05D003324 4.4e-06 54.7 130 33.1
Aqoxy6G02093 Aquilegia oxysepala HOM05D002716 ORTHO05D003324 4.4e-06 54.7 130 33.1
Glyma.04G021500 Glycine max HOM05D002716 ORTHO05D003324 4.4e-06 54.7 130 33.1
Thecc.02G057700 Theobroma cacao HOM05D002716 ORTHO05D003324 4.4e-06 54.7 130 33.1
TAR381G0159 Trochodendron aralioides HOM05D002716 ORTHO05D003324 4.4e-06 54.7 130 33.1
Migut.B00069 Erythranthe guttata HOM05D002716 ORTHO05D003324 5.8e-06 54.3 130 33.1
Migut.E00245 Erythranthe guttata HOM05D002716 ORTHO05D003324 5.8e-06 54.3 130 33.1
Lj1g0026889 Lotus japonicus HOM05D002716 ORTHO05D003324 5.8e-06 54.3 130 33.1
Manes.04G071700 Manihot esculenta HOM05D002716 ORTHO05D003324 5.8e-06 54.3 130 33.1
Manes.11G097100 Manihot esculenta HOM05D002716 ORTHO05D003324 5.8e-06 54.3 130 33.1
Sabra09G0106400 Salix brachista HOM05D002716 ORTHO05D003324 5.8e-06 54.3 130 33.1
SalBow1G6245 Salvia bowleyana HOM05D002716 ORTHO05D003324 5.8e-06 54.3 130 33.1
vmacro17316 Vaccinium macrocarpon HOM05D002716 ORTHO05D003324 5.8e-06 54.3 141 32.6
GSVIVG01008761001 Vitis vinifera HOM05D002716 ORTHO05D003324 5.8e-06 54.3 130 33.1
CsaV3_7G001120 Cucumis sativus L. HOM05D002716 ORTHO05D003324 7.6e-06 53.9 130 33.1
Oeu019917.1 Olea europaea HOM05D002716 ORTHO05D003324 7.6e-06 53.9 130 32.3
Psat3g119800 Pisum sativum HOM05D002716 ORTHO05D003324 7.6e-06 53.9 113 35.4
Potri.004G176600 Populus trichocarpa HOM05D002716 ORTHO05D003324 7.6e-06 53.9 130 32.3
QL02p012612 Quercus lobata HOM05D002716 ORTHO05D003324 7.6e-06 53.9 130 32.3
Sed0024991 Sechium edule HOM05D002716 ORTHO05D003324 7.6e-06 53.9 130 33.1
Solyc01g111710.4 Solanum lycopersicum HOM05D002716 ORTHO05D003324 7.6e-06 53.9 130 33.8
CSS0001298 Camellia sinensis var. sinensis HOM05D002716 ORTHO05D003324 9.9e-06 53.5 130 32.3
MD08G1008900 Malus domestica HOM05D002716 ORTHO05D003324 9.9e-06 53.5 130 32.3
Nitab4.5_0000283g0490 Nicotiana tabacum HOM05D002716 ORTHO05D003324 9.9e-06 53.5 137 32.1
PGR083G1040 Punica granatum HOM05D002716 ORTHO05D003324 9.9e-06 53.5 130 32.3
HPP92_020731 Vanilla planifolia HOM05D002716 ORTHO05D003324 9.9e-06 53.5 130 32.3
HPP92_022181 Vanilla planifolia HOM05D002716 ORTHO05D003324 9.9e-06 53.5 130 32.3
HPP92_022197 Vanilla planifolia HOM05D002716 ORTHO05D003324 9.9e-06 53.5 130 32.3
Zm00001eb202860 Zea mays HOM05D002716 ORTHO05D003324 9.9e-06 53.5 130 32.3


User provided reference genes

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