Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p047370 Quercus lobata HOM05D000241 ORTHO05D003908 6.5e-88 327.4 171 100.0
QL11p047392 Quercus lobata HOM05D000241 ORTHO05D003908 1.3e-56 223.4 185 68.6
Dinv41426 Davidia involucrata HOM05D000241 ORTHO05D003908 8.1e-54 214.2 184 62.5
FAN24G0350 Fragaria x ananassa HOM05D000241 ORTHO05D003908 1.7e-51 206.5 230 53.0
FAN20G2956 Fragaria x ananassa HOM05D000241 ORTHO05D003908 4.9e-51 204.9 230 52.6
RcHm_v2.0_Chr6g0245871 Rosa chinensis HOM05D000241 ORTHO05D003908 4.9e-51 204.9 229 53.3
QL11p047408 Quercus lobata HOM05D000241 ORTHO05D003908 7.1e-50 201.1 211 56.4
Prupe.8G158900 Prunus persica HOM05D000241 ORTHO05D003908 9.2e-50 200.7 219 53.4
TAR365G0378 Trochodendron aralioides HOM05D000241 ORTHO05D003908 1.3e-48 196.8 236 50.4
Thecc.02G068500 Theobroma cacao HOM05D000241 ORTHO05D003908 1.7e-48 196.4 238 50.0
Duzib132G0476 Durio zibethinus HOM05D000241 ORTHO05D003908 2.3e-48 196.1 238 50.4
TAR365G0874 Trochodendron aralioides HOM05D000241 ORTHO05D003908 3.9e-48 195.3 236 50.0
Atru.chr5.3205 Acer truncatum HOM05D000241 ORTHO05D003908 6.6e-48 194.5 220 52.3
Ciclev10028106m.g Citrus clementina HOM05D000241 ORTHO05D003908 1.9e-47 193.0 219 52.5
Gorai.008G033000 Gossypium raimondii HOM05D000241 ORTHO05D003908 1.9e-47 193.0 238 50.0
Gohir.D12G032300 Gossypium hirsutum HOM05D000241 ORTHO05D003908 2.5e-47 192.6 238 49.6
Hma1.2p1_0032F.1_g020020 Hydrangea macrophylla HOM05D000241 ORTHO05D003908 5.6e-47 191.4 219 49.8
Haze_02208 Corylus avellana HOM05D000241 ORTHO05D003908 9.6e-47 190.7 219 52.1
MD05G1114500 Malus domestica HOM05D000241 ORTHO05D003908 2.8e-46 189.1 234 50.9
COL.COLO4_17241 Corchorus olitorius HOM05D000241 ORTHO05D003908 3.6e-46 188.7 219 49.8
arahy.Tifrunner.gnm1.ann1.DAG01L Arachis hypogaea HOM05D000241 ORTHO05D003908 1.1e-45 187.2 219 52.1
arahy.Tifrunner.gnm1.ann1.GLQM1M Arachis hypogaea HOM05D000241 ORTHO05D003908 1.4e-45 186.8 219 52.5
Actinidia27845 Actinidia chinensis HOM05D000241 ORTHO05D003908 1.8e-45 186.4 239 48.1
Lj3g0023353 Lotus japonicus HOM05D000241 ORTHO05D003908 4.0e-45 185.3 218 50.9
Glyma.11G097800 Glycine max HOM05D000241 ORTHO05D003908 6.8e-45 184.5 223 49.3
QL11p047414 Quercus lobata HOM05D000241 ORTHO05D003908 1.5e-44 183.3 214 53.3
VMungo1127G1845 Vigna mungo HOM05D000241 ORTHO05D003908 2.6e-44 182.6 235 48.1
Manes.04G078900 Manihot esculenta HOM05D000241 ORTHO05D003908 3.4e-44 182.2 240 46.7
Medtr4g075590 Medicago truncatula HOM05D000241 ORTHO05D003908 9.9e-44 180.6 218 49.1
Phvul.011G025800 Phaseolus vulgaris HOM05D000241 ORTHO05D003908 2.2e-43 179.5 235 47.2
Lj3g0022345 Lotus japonicus HOM05D000241 ORTHO05D003908 3.2e-42 175.6 222 48.6
Potri.009G128100 Populus trichocarpa HOM05D000241 ORTHO05D003908 1.6e-41 173.3 234 44.9
Psat7g178080 Pisum sativum HOM05D000241 ORTHO05D003908 4.6e-41 171.8 219 47.0
MBI18_g10386_MAGBIO Magnolia biondii HOM05D000241 ORTHO05D003908 3.0e-40 169.1 219 44.7
Glyma.12G023600 Glycine max HOM05D000241 ORTHO05D003908 3.9e-40 168.7 218 46.3
Medtr4g075570 Medicago truncatula HOM05D000241 ORTHO05D003908 3.9e-40 168.7 230 45.7
Cfa005170 Carpinus fangiana HOM05D000241 ORTHO05D003908 6.6e-40 167.9 223 48.0
ClCG02G011460 Citrullus lanatus HOM05D000241 ORTHO05D003908 8.7e-40 167.5 242 42.6
Sed0018107 Sechium edule HOM05D000241 ORTHO05D003908 8.7e-40 167.5 219 44.7
VMungo1127G0755 Vigna mungo HOM05D000241 ORTHO05D003908 2.5e-39 166.0 218 45.0
Phvul.011G025700 Phaseolus vulgaris HOM05D000241 ORTHO05D003908 4.3e-39 165.2 218 44.5
Lalb_Chr01g0001271 Lupinus albus HOM05D000241 ORTHO05D003908 9.6e-39 164.1 207 47.8
CsaV3_2G015640 Cucumis sativus L. HOM05D000241 ORTHO05D003908 8.1e-38 161.0 219 43.8
Gohir.A12G040000 Gossypium hirsutum HOM05D000241 ORTHO05D003908 8.1e-38 161.0 238 45.8
Cpa.g.sc37.204 Carica papaya HOM05D000241 ORTHO05D003908 1.1e-37 160.6 235 43.0
MELO3C020774.2 Cucumis melo HOM05D000241 ORTHO05D003908 1.4e-37 160.2 219 43.8
TPR.G15962 Trifolium pratense HOM05D000241 ORTHO05D003908 2.4e-37 159.5 227 44.9
TWI75G1317 Tripterygium wilfordii HOM05D000241 ORTHO05D003908 7.6e-36 154.5 230 42.6
PGR142G0426 Punica granatum HOM05D000241 ORTHO05D003908 2.1e-33 146.4 213 43.2
FAN15G2085 Fragaria x ananassa HOM05D000241 ORTHO05D003908 4.6e-33 145.2 175 50.9
Haze_02209 Corylus avellana HOM05D000241 ORTHO05D003908 3.3e-31 139.0 195 43.1
RcHm_v2.0_Chr6g0245851 Rosa chinensis HOM05D000241 ORTHO05D003908 6.2e-30 134.8 199 45.2
QL11p047314 Quercus lobata HOM05D000241 ORTHO05D003908 2.4e-29 132.9 234 37.6
CANSAT25G3045 Cannabis sativa HOM05D000241 ORTHO05D003908 1.1e-26 124.0 182 47.3
FAN27G2249 Fragaria x ananassa HOM05D000241 ORTHO05D003908 1.4e-26 123.6 82 76.8
Lalb_Chr01g0001261 Lupinus albus HOM05D000241 ORTHO05D003908 4.6e-25 118.6 236 33.1
QL11p047358 Quercus lobata HOM05D000241 ORTHO05D003908 4.6e-25 118.6 218 38.1
Nitab4.5_0000980g0410 Nicotiana tabacum HOM05D000241 ORTHO05D003908 2.1e-22 109.8 185 34.1
MSTRG.27671 Avicennia marina HOM05D000241 ORTHO05D003908 4.8e-22 108.6 239 30.1
HanXRQChr10g0296301 Helianthus annuus HOM05D000241 ORTHO05D003908 6.2e-22 108.2 239 28.5
CANSAT25G1665 Cannabis sativa HOM05D000241 ORTHO05D003908 8.1e-22 107.8 239 30.1
Cfa005172 Carpinus fangiana HOM05D000241 ORTHO05D003908 1.8e-21 106.7 225 30.2
Haze_27636 Corylus avellana HOM05D000241 ORTHO05D003908 3.1e-21 105.9 102 56.9
TAR381G1346 Trochodendron aralioides HOM05D000241 ORTHO05D003908 3.1e-21 105.9 239 29.3
CiPaw.05G076200 Carya illinoinensis HOM05D000241 ORTHO05D003908 5.3e-21 105.1 239 30.1
Sabra09G0098100 Salix brachista HOM05D000241 ORTHO05D003908 5.3e-21 105.1 228 30.3
Aqoxy6G02057 Aquilegia oxysepala HOM05D000241 ORTHO05D003908 6.9e-21 104.8 239 30.5
Eucgr.I01369 Eucalyptus grandis HOM05D000241 ORTHO05D003908 6.9e-21 104.8 228 30.3
Lj5A186T39 Lonicera japonica HOM05D000241 ORTHO05D003908 6.9e-21 104.8 167 35.3
PSO675G1920 Papaver somniferum HOM05D000241 ORTHO05D003908 9.0e-21 104.4 241 30.7
Potri.009G127900 Populus trichocarpa HOM05D000241 ORTHO05D003908 9.0e-21 104.4 239 30.1
Atru.chr5.3207 Acer truncatum HOM05D000241 ORTHO05D003908 1.2e-20 104.0 228 30.7
SalBow3G3022 Salvia bowleyana HOM05D000241 ORTHO05D003908 1.2e-20 104.0 239 28.5
Aqoxy6G01726 Aquilegia oxysepala HOM05D000241 ORTHO05D003908 1.5e-20 103.6 225 31.1
Solyc10g054810.2 Solanum lycopersicum HOM05D000241 ORTHO05D003908 1.5e-20 103.6 225 28.4
PGSC0003DMG400026705 Solanum tuberosum HOM05D000241 ORTHO05D003908 1.5e-20 103.6 225 28.4
HanXRQChr10g0296311 Helianthus annuus HOM05D000241 ORTHO05D003908 2.0e-20 103.2 239 28.0
MBI05_g15355_MAGBIO Magnolia biondii HOM05D000241 ORTHO05D003908 2.0e-20 103.2 239 29.7
MD10G1116500 Malus domestica HOM05D000241 ORTHO05D003908 2.0e-20 103.2 225 29.8
Thecc.02G068400 Theobroma cacao HOM05D000241 ORTHO05D003908 2.0e-20 103.2 228 29.8
Nn1g05881 Nelumbo nucifera HOM05D000241 ORTHO05D003908 2.6e-20 102.8 240 29.6
Peaxi162Scf00684g00012 Petunia axillaris HOM05D000241 ORTHO05D003908 2.6e-20 102.8 228 28.9
Solyc10g054820.2 Solanum lycopersicum HOM05D000241 ORTHO05D003908 2.6e-20 102.8 225 28.9
Solyc10g054790.2 Solanum lycopersicum HOM05D000241 ORTHO05D003908 3.4e-20 102.4 239 27.2
Aqoxy5G01028 Aquilegia oxysepala HOM05D000241 ORTHO05D003908 4.5e-20 102.1 239 29.3
DCAR_003692 Daucus carota HOM05D000241 ORTHO05D003908 4.5e-20 102.1 225 28.0
Sopen10g024720 Solanum pennellii HOM05D000241 ORTHO05D003908 4.5e-20 102.1 239 26.8
FAN15G2169 Fragaria x ananassa HOM05D000241 ORTHO05D003908 7.6e-20 101.3 239 29.3
FAN15G3477 Fragaria x ananassa HOM05D000241 ORTHO05D003908 7.6e-20 101.3 239 29.3
Potri.004G167000 Populus trichocarpa HOM05D000241 ORTHO05D003908 1.0e-19 100.9 227 30.0
RcHm_v2.0_Chr6g0245841 Rosa chinensis HOM05D000241 ORTHO05D003908 1.0e-19 100.9 239 30.1
Sabra09G0098400 Salix brachista HOM05D000241 ORTHO05D003908 1.0e-19 100.9 228 29.8
Solyc10g054800.2 Solanum lycopersicum HOM05D000241 ORTHO05D003908 1.0e-19 100.9 225 28.4
Sopen10g024750 Solanum pennellii HOM05D000241 ORTHO05D003908 1.0e-19 100.9 225 28.4
ECA234G4588 Erigeron canadensis HOM05D000241 ORTHO05D003908 1.7e-19 100.1 239 28.9
Gohir.D01G155300 Gossypium hirsutum HOM05D000241 ORTHO05D003908 1.7e-19 100.1 225 27.6
Gorai.002G192500 Gossypium raimondii HOM05D000241 ORTHO05D003908 1.7e-19 100.1 225 27.6
Manes.11G089200 Manihot esculenta HOM05D000241 ORTHO05D003908 1.7e-19 100.1 228 28.9
Potri.009G128300 Populus trichocarpa HOM05D000241 ORTHO05D003908 1.7e-19 100.1 228 31.6
PGSC0003DMG400004438 Solanum tuberosum HOM05D000241 ORTHO05D003908 1.7e-19 100.1 225 27.6
Actinidia32088 Actinidia chinensis HOM05D000241 ORTHO05D003908 2.2e-19 99.8 225 28.9
FvH4_2g02190 Fragaria vesca HOM05D000241 ORTHO05D003908 2.2e-19 99.8 239 28.9
Gohir.A01G163100 Gossypium hirsutum HOM05D000241 ORTHO05D003908 2.2e-19 99.8 225 27.6
Potri.009G128000 Populus trichocarpa HOM05D000241 ORTHO05D003908 2.2e-19 99.8 228 29.8
Prupe.8G159000 Prunus persica HOM05D000241 ORTHO05D003908 2.2e-19 99.8 225 28.4
Solyc10g054840.2 Solanum lycopersicum HOM05D000241 ORTHO05D003908 2.2e-19 99.8 225 27.6
MBI05_g15353_MAGBIO Magnolia biondii HOM05D000241 ORTHO05D003908 2.9e-19 99.4 239 28.5
Hma1.2p1_1385F.1_g279640 Hydrangea macrophylla HOM05D000241 ORTHO05D003908 3.8e-19 99.0 228 28.5
Gohir.A12G039900 Gossypium hirsutum HOM05D000241 ORTHO05D003908 4.9e-19 98.6 225 28.0
Gorai.008G033100 Gossypium raimondii HOM05D000241 ORTHO05D003908 4.9e-19 98.6 225 28.0
Oeu010056.1 Olea europaea HOM05D000241 ORTHO05D003908 4.9e-19 98.6 239 26.4
Sabra09G0098200 Salix brachista HOM05D000241 ORTHO05D003908 4.9e-19 98.6 228 29.4
Thecc.02G068300 Theobroma cacao HOM05D000241 ORTHO05D003908 4.9e-19 98.6 228 28.1
COL.COLO4_17242 Corchorus olitorius HOM05D000241 ORTHO05D003908 6.5e-19 98.2 228 28.5
DCAR_024203 Daucus carota HOM05D000241 ORTHO05D003908 6.5e-19 98.2 225 28.0
Nitab4.5_0000283g0230 Nicotiana tabacum HOM05D000241 ORTHO05D003908 6.5e-19 98.2 210 29.0
Potri.009G128500 Populus trichocarpa HOM05D000241 ORTHO05D003908 6.5e-19 98.2 225 30.2
Lj5A186T40 Lonicera japonica HOM05D000241 ORTHO05D003908 1.4e-18 97.1 228 29.4
RcHm_v2.0_Chr6g0245861 Rosa chinensis HOM05D000241 ORTHO05D003908 1.4e-18 97.1 239 28.0
Hund06395 Selenicereus undatus HOM05D000241 ORTHO05D003908 1.4e-18 97.1 240 27.9
Nitab4.5_0007293g0050 Nicotiana tabacum HOM05D000241 ORTHO05D003908 1.9e-18 96.7 225 27.1
CSS0031679 Camellia sinensis var. sinensis HOM05D000241 ORTHO05D003908 3.2e-18 95.9 228 28.1
TWI31G0060 Tripterygium wilfordii HOM05D000241 ORTHO05D003908 3.2e-18 95.9 228 30.7
CAN.G564.27 Capsicum annuum HOM05D000241 ORTHO05D003908 4.2e-18 95.5 225 26.7
Rhsim05G0063800 Rhododendron simsii HOM05D000241 ORTHO05D003908 4.2e-18 95.5 239 27.6
PGSC0003DMG400026706 Solanum tuberosum HOM05D000241 ORTHO05D003908 4.2e-18 95.5 218 28.4
Migut.N01288 Erythranthe guttata HOM05D000241 ORTHO05D003908 5.5e-18 95.1 239 28.5
Nitab4.5_0000956g0150 Nicotiana tabacum HOM05D000241 ORTHO05D003908 5.5e-18 95.1 225 27.1
Sopen10g024760 Solanum pennellii HOM05D000241 ORTHO05D003908 5.5e-18 95.1 225 27.6
Aqoxy6G01727 Aquilegia oxysepala HOM05D000241 ORTHO05D003908 7.1e-18 94.7 227 29.1
Nitab4.5_0006828g0010 Nicotiana tabacum HOM05D000241 ORTHO05D003908 7.1e-18 94.7 228 27.6
Peaxi162Scf00362g01042 Petunia axillaris HOM05D000057 ORTHO05D003908 9.3e-18 94.4 228 27.6
GSVIVG01024115001 Vitis vinifera HOM05D000241 ORTHO05D003908 9.3e-18 94.4 242 28.5
Dinv41982 Davidia involucrata HOM05D000241 ORTHO05D003908 1.2e-17 94.0 218 29.8
Manes.11G089100 Manihot esculenta HOM05D000241 ORTHO05D003908 1.2e-17 94.0 228 28.1
PSO541G4683 Papaver somniferum HOM05D000241 ORTHO05D003908 1.2e-17 94.0 241 29.5
unitig_26.g10004 Utricularia gibba HOM05D000241 ORTHO05D003908 1.6e-17 93.6 226 29.2
Cc08_g04450 Coffea canephora HOM05D000241 ORTHO05D003908 2.1e-17 93.2 229 27.5
Nitab4.5_0007733g0020 Nicotiana tabacum HOM05D000241 ORTHO05D003908 2.7e-17 92.8 228 27.6
CDE05G1340 Ceratophyllum demersum HOM05D000241 ORTHO05D003908 3.5e-17 92.4 229 30.1
Duzib132G0758 Durio zibethinus HOM05D000241 ORTHO05D003908 3.5e-17 92.4 228 27.6
Glyma.12G023700 Glycine max HOM05D000241 ORTHO05D003908 3.5e-17 92.4 83 60.2
QL11p047417 Quercus lobata HOM05D000241 ORTHO05D003908 4.6e-17 92.0 239 27.6
Cc02_g16660 Coffea canephora HOM05D000241 ORTHO05D003908 6.0e-17 91.7 241 27.0
vmacro17386 Vaccinium macrocarpon HOM05D000241 ORTHO05D003908 6.0e-17 91.7 239 26.4
Solyc01g111010.4 Solanum lycopersicum HOM05D000057 ORTHO05D003908 7.9e-17 91.3 225 26.7
Sopen01g053070 Solanum pennellii HOM05D000241 ORTHO05D003908 1.3e-16 90.5 225 26.7
MSTRG.27667 Avicennia marina HOM05D000241 ORTHO05D003908 1.8e-16 90.1 226 28.3
CSS0035300 Camellia sinensis var. sinensis HOM05D000241 ORTHO05D003908 2.3e-16 89.7 221 28.1
Cfa005167 Carpinus fangiana HOM05D000241 ORTHO05D003908 5.1e-16 88.6 84 53.6
Cc02_g16640 Coffea canephora HOM05D000241 ORTHO05D003908 1.1e-15 87.4 228 26.3
Rhsim05G0064100 Rhododendron simsii HOM05D000241 ORTHO05D003908 1.5e-15 87.0 239 26.8
arahy.Tifrunner.gnm1.ann1.AW0T33 Arachis hypogaea HOM05D000241 ORTHO05D003908 1.9e-15 86.7 170 33.5
Ciclev10029916m.g Citrus clementina HOM05D000241 ORTHO05D003908 1.9e-15 86.7 225 30.2
MSTRG.27668 Avicennia marina HOM05D000241 ORTHO05D003908 7.4e-15 84.7 77 51.9
Gohir.D12G032400 Gossypium hirsutum HOM05D000241 ORTHO05D003908 7.4e-15 84.7 219 26.5
SGA_v2.0_scaffold207G41887 Striga asiatica HOM05D000241 ORTHO05D003908 9.6e-15 84.3 77 51.9
Lsat_1_v5_gn_4_74220 Lactuca sativa HOM05D000241 ORTHO05D003908 1.6e-14 83.6 63 57.1
Manes.11G089300 Manihot esculenta HOM05D000241 ORTHO05D003908 1.8e-13 80.1 63 58.7
Peaxi162Scf00538g00529 Petunia axillaris HOM05D000241 ORTHO05D003908 1.8e-13 80.1 192 27.1
PGSC0003DMG400034609 Solanum tuberosum HOM05D000241 ORTHO05D003908 2.4e-13 79.7 63 52.4
Cpa.g.sc37.203 Carica papaya HOM05D000241 ORTHO05D003908 3.1e-13 79.3 63 60.3
arahy.Tifrunner.gnm1.ann1.X885L6 Arachis hypogaea HOM05D000241 ORTHO05D003908 4.1e-13 79.0 198 30.3
AUR62013107 Chenopodium quinoa HOM05D000241 ORTHO05D003908 5.3e-13 78.6 240 27.1
AUR62010112 Chenopodium quinoa HOM05D000241 ORTHO05D003908 9.0e-13 77.8 224 27.7
CAN.G588.13 Capsicum annuum HOM05D000241 ORTHO05D003908 1.2e-12 77.4 207 26.1
EL10Ac9g21460 Beta vulgaris HOM05D000241 ORTHO05D003908 2.0e-12 76.6 240 26.2
PGSC0003DMG400001640 Solanum tuberosum HOM05D000241 ORTHO05D003908 2.0e-12 76.6 207 25.6
Oeu020684.1 Olea europaea HOM05D000241 ORTHO05D003908 3.4e-12 75.9 221 25.3
Sopen10g024740 Solanum pennellii HOM05D000241 ORTHO05D003908 3.4e-12 75.9 63 52.4
Oeu046122.1 Olea europaea HOM05D000241 ORTHO05D003908 4.5e-12 75.5 77 45.5
unitig_0.g2349 Utricularia gibba HOM05D000241 ORTHO05D003908 3.8e-11 72.4 228 25.0
GSVIVG01024113001 Vitis vinifera HOM05D000241 ORTHO05D003908 4.2e-10 68.9 88 40.9
Atru.chr5.3206 Acer truncatum HOM05D000241 ORTHO05D003908 7.1e-10 68.2 66 51.5
arahy.Tifrunner.gnm1.ann1.TZR4FL Arachis hypogaea HOM05D000241 ORTHO05D003908 1.2e-09 67.4 196 29.6
Duzib052G1219 Durio zibethinus HOM05D000241 ORTHO05D003908 1.2e-09 67.4 211 26.1
FAN27G2522 Fragaria x ananassa HOM05D000241 ORTHO05D003908 1.6e-09 67.0 44 77.3
RcHm_v2.0_Chr6g0245821 Rosa chinensis HOM05D000241 ORTHO05D003908 3.5e-09 65.9 75 44.0
Ah.01g009480 Amaranthus hybridus HOM05D000241 ORTHO05D003908 4.6e-09 65.5 79 38.0
PSO675G3095 Papaver somniferum HOM05D000241 ORTHO05D003908 7.9e-09 64.7 162 27.2
Sabra09G0098300 Salix brachista HOM05D000241 ORTHO05D003908 1.5e-07 60.5 39 71.8
Ah.01g022400 Amaranthus hybridus HOM05D000241 ORTHO05D003908 2.5e-07 59.7 176 26.7
COL.COLO4_17243 Corchorus olitorius HOM05D000241 ORTHO05D003908 4.3e-07 58.9 111 30.6


User provided reference genes

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