Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p047023 Quercus lobata HOM05D005996 ORTHO05D007507 1.8e-76 289.3 153 100.0
QL11p046997 Quercus lobata HOM05D005996 ORTHO05D007507 6.8e-52 207.6 127 87.4
Cfa005165 Carpinus fangiana HOM05D005996 ORTHO05D007507 7.3e-30 134.4 132 62.9
Haze_02211 Corylus avellana HOM05D005996 ORTHO05D007507 2.3e-28 129.4 132 62.1
CiPaw.06G125900 Carya illinoinensis HOM05D005996 ORTHO05D007507 1.3e-23 113.6 129 51.9
Dinv41983 Davidia involucrata HOM05D005996 ORTHO05D007507 1.2e-19 100.5 112 54.5
MELO3C020773.2 Cucumis melo HOM05D005996 ORTHO05D007507 3.4e-19 99.0 143 48.3
ClCG11G003680 Citrullus lanatus HOM05D005996 ORTHO05D007507 5.8e-19 98.2 143 47.6
CsaV3_2G015630 Cucumis sativus L. HOM05D005996 ORTHO05D007507 6.4e-18 94.7 143 46.2
CANSAT25G2790 Cannabis sativa HOM05D005996 ORTHO05D007507 1.1e-17 94.0 133 46.6
Dinv04976 Davidia involucrata HOM05D005996 ORTHO05D007507 1.1e-17 94.0 154 43.5
MD05G1113900 Malus domestica HOM05D005996 ORTHO05D007507 1.9e-17 93.2 109 57.8
Sed0010933 Sechium edule HOM05D005996 ORTHO05D007507 3.5e-16 89.0 143 42.7
FAN15G0761 Fragaria x ananassa HOM05D005996 ORTHO05D007507 1.2e-13 80.5 149 40.3
FvH4_2g02240 Fragaria vesca HOM05D005996 ORTHO05D007507 1.6e-13 80.1 149 38.9
FAN20G0865 Fragaria x ananassa HOM05D005996 ORTHO05D007507 1.6e-13 80.1 149 40.3
FAN24G2882 Fragaria x ananassa HOM05D005996 ORTHO05D007507 1.6e-13 80.1 149 38.9
Prupe.8G158300 Prunus persica HOM05D005996 ORTHO05D007507 1.6e-13 80.1 109 53.2
Sed0023130 Sechium edule HOM05D005996 ORTHO05D007507 2.1e-13 79.7 141 39.7
Cpa.g.sc37.207 Carica papaya HOM05D005996 ORTHO05D007507 6.2e-13 78.2 124 46.8
FAN27G2880 Fragaria x ananassa HOM05D005996 ORTHO05D007507 1.1e-12 77.4 149 39.6
TAR628G0048 Trochodendron aralioides HOM05D005996 ORTHO05D007507 1.4e-12 77.0 114 45.6
Nn5g29328 Nelumbo nucifera HOM05D005996 ORTHO05D007507 1.5e-11 73.6 138 41.3
PGR142G2892 Punica granatum HOM05D005996 ORTHO05D007507 4.4e-11 72.0 126 45.2
TWI75G0427 Tripterygium wilfordii HOM05D005996 ORTHO05D007507 5.8e-11 71.6 117 41.0
vmacro17393 Vaccinium macrocarpon HOM05D005996 ORTHO05D007507 9.9e-11 70.9 111 44.1
arahy.Tifrunner.gnm1.ann1.XDQA6W Arachis hypogaea HOM05D005996 ORTHO05D007507 1.3e-10 70.5 131 39.7
arahy.Tifrunner.gnm1.ann1.YQYF3H Arachis hypogaea HOM05D005996 ORTHO05D007507 1.3e-10 70.5 131 39.7
Glyma.12G033700 Glycine max HOM05D005996 ORTHO05D007507 2.2e-10 69.7 138 40.6
Actinidia32089 Actinidia chinensis HOM05D005996 ORTHO05D007507 2.9e-10 69.3 107 47.7
RcHm_v2.0_Chr6g0245931 Rosa chinensis HOM05D005996 ORTHO05D007507 2.9e-10 69.3 110 45.5
Rhsim05G0064300 Rhododendron simsii HOM05D005996 ORTHO05D007507 8.4e-10 67.8 106 48.1
Gohir.D13G094700 Gossypium hirsutum HOM05D005996 ORTHO05D007507 3.2e-09 65.9 125 38.4
Thhalv10024275m.g Eutrema salsugineum HOM05D005996 ORTHO05D007507 7.1e-09 64.7 117 41.0
THA.LOC104807280 Tarenaya hassleriana HOM05D005996 ORTHO05D007507 7.1e-09 64.7 106 44.3
Gorai.001G246900 Gossypium raimondii HOM05D005996 ORTHO05D007507 2.7e-08 62.8 125 38.4
Duzib248G0011 Durio zibethinus HOM05D005996 ORTHO05D007507 1.0e-07 60.8 102 39.2
Aqoxy5G01766 Aquilegia oxysepala HOM05D005996 ORTHO05D007507 1.3e-07 60.5 132 37.9
PSO700G0013 Papaver somniferum HOM05D005996 ORTHO05D007507 1.7e-07 60.1 140 42.9
Phvul.011G036300 Phaseolus vulgaris HOM05D005996 ORTHO05D007507 1.7e-07 60.1 136 39.0
PSO170G2255 Papaver somniferum HOM05D005996 ORTHO05D007507 3.0e-07 59.3 140 42.1
Manes.11G088257 Manihot esculenta HOM05D005996 ORTHO05D007507 3.9e-07 58.9 131 37.4
Manes.11G088413 Manihot esculenta HOM05D005996 ORTHO05D007507 3.9e-07 58.9 131 37.4
CARHR243120 Cardamine hirsuta HOM05D005996 ORTHO05D007507 5.1e-07 58.5 106 38.7
Duzib052G0584 Durio zibethinus HOM05D005996 ORTHO05D007507 8.6e-07 57.8 104 40.4
Medtr4g072990 Medicago truncatula HOM05D005996 ORTHO05D007507 8.6e-07 57.8 138 38.4
Gohir.A13G098800 Gossypium hirsutum HOM05D005996 ORTHO05D007507 1.1e-06 57.4 125 35.2
Nitab4.5_0000283g0180 Nicotiana tabacum HOM05D005996 ORTHO05D007507 1.9e-06 56.6 128 37.5
PGSC0003DMG400001599 Solanum tuberosum HOM05D005996 ORTHO05D007507 1.9e-06 56.6 105 43.8
VMungo1127G0707 Vigna mungo HOM05D005996 ORTHO05D007507 1.9e-06 56.6 136 37.5
Lj5C186G10 Lonicera japonica HOM05D005996 ORTHO05D007507 9.6e-06 54.3 77 44.2


User provided reference genes

Program Settings