Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p046751 Quercus lobata HOM05D000586 ORTHO05D008681 1.3e-112 409.8 227 100.0
Haze_02225 Corylus avellana HOM05D000586 ORTHO05D008681 3.8e-91 338.6 227 80.2
CiPaw.05G074600 Carya illinoinensis HOM05D000586 ORTHO05D008681 5.8e-84 314.7 227 75.3
Thecc.02G073100 Theobroma cacao HOM05D000586 ORTHO05D008681 1.1e-74 283.9 227 70.5
Prupe.8G082300 Prunus persica HOM05D000586 ORTHO05D008681 1.4e-74 283.5 197 77.2
PGR042G2570 Punica granatum HOM05D000586 ORTHO05D008681 2.7e-73 279.3 213 73.2
Duzib052G0483 Durio zibethinus HOM05D000586 ORTHO05D008681 3.5e-73 278.9 185 79.5
Manes.11G092006 Manihot esculenta HOM05D000586 ORTHO05D008681 3.0e-72 275.8 215 72.6
RcHm_v2.0_Chr6g0268531 Rosa chinensis HOM05D000586 ORTHO05D008681 6.7e-72 274.6 226 69.0
FAN20G2293 Fragaria x ananassa HOM05D000586 ORTHO05D008681 8.7e-72 274.2 226 69.5
MD00G1066800 Malus domestica HOM05D000586 ORTHO05D008681 8.7e-72 274.2 196 75.5
Gorai.001G244200 Gossypium raimondii HOM05D000586 ORTHO05D008681 1.1e-71 273.9 227 69.6
FAN24G2793 Fragaria x ananassa HOM05D000586 ORTHO05D008681 1.9e-71 273.1 226 69.0
Gohir.D13G090500 Gossypium hirsutum HOM05D000586 ORTHO05D008681 1.9e-71 273.1 227 69.6
Ciclev10029227m.g Citrus clementina HOM05D000586 ORTHO05D008681 3.3e-71 272.3 206 72.8
FvH4_2g10740 Fragaria vesca HOM05D000586 ORTHO05D008681 3.3e-71 272.3 226 69.0
TAR381G1606 Trochodendron aralioides HOM05D000586 ORTHO05D008681 5.7e-71 271.6 233 67.4
Dinv41988 Davidia involucrata HOM05D000586 ORTHO05D008681 7.4e-71 271.2 237 67.5
Nn6g32309 Nelumbo nucifera HOM05D000586 ORTHO05D008681 7.4e-71 271.2 181 79.6
Cpa.g.sc150.2 Carica papaya HOM05D000586 ORTHO05D008681 1.3e-70 270.4 172 83.7
Potri.004G164200 Populus trichocarpa HOM05D000586 ORTHO05D008681 1.3e-70 270.4 205 73.2
MBI05_g26502_MAGBIO Magnolia biondii HOM05D000586 ORTHO05D008681 2.1e-70 269.6 184 78.3
Sed0014971 Sechium edule HOM05D000586 ORTHO05D008681 4.8e-70 268.5 227 67.0
ClCG11G003770 Citrullus lanatus HOM05D000586 ORTHO05D008681 8.2e-70 267.7 206 72.3
CsaV3_2G015360 Cucumis sativus L. HOM05D000586 ORTHO05D008681 1.4e-69 266.9 227 67.0
Sabra04G0110300 Salix brachista HOM05D000586 ORTHO05D008681 3.1e-69 265.8 205 72.2
Dinv23444 Davidia involucrata HOM05D000586 ORTHO05D008681 1.0e-67 260.8 238 64.3
AT4G34730 Arabidopsis thaliana HOM05D000586 ORTHO05D008681 2.2e-67 259.6 202 70.3
Phvul.009G002100 Phaseolus vulgaris HOM05D000586 ORTHO05D008681 3.8e-67 258.8 205 70.7
Eucgr.G01743 Eucalyptus grandis HOM05D000586 ORTHO05D008681 8.4e-67 257.7 166 82.5
Sp7g32510 Schrenkiella parvula HOM05D000586 ORTHO05D008681 8.4e-67 257.7 202 68.8
CARHR243030 Cardamine hirsuta HOM05D000586 ORTHO05D008681 2.5e-66 256.1 202 67.8
VMungo1309G1236 Vigna mungo HOM05D000586 ORTHO05D008681 2.5e-66 256.1 208 67.8
THA.LOC104807288 Tarenaya hassleriana HOM05D000586 ORTHO05D008681 4.2e-66 255.4 213 67.1
BolC7t46503H Brassica oleracea HOM05D000586 ORTHO05D008681 1.6e-65 253.4 208 67.3
C07p60740 Brassica napus HOM05D000586 ORTHO05D001010 2.1e-65 253.1 208 66.8
Thhalv10026220m.g Eutrema salsugineum HOM05D000586 ORTHO05D008681 2.7e-65 252.7 202 68.3
Lj1g0002953 Lotus japonicus HOM05D000586 ORTHO05D008681 2.7e-65 252.7 194 72.2
FAN15G3000 Fragaria x ananassa HOM05D000586 ORTHO05D008681 3.5e-65 252.3 165 81.8
Aa31LG2G15790 Aethionema arabicum HOM05D000586 ORTHO05D008681 4.6e-65 251.9 180 74.4
AL7G16470 Arabidopsis lyrata HOM05D000586 ORTHO05D008681 4.6e-65 251.9 202 67.8
Carub.0007s0556 Capsella rubella HOM05D000586 ORTHO05D008681 4.6e-65 251.9 202 66.8
Nitab4.5_0010885g0020 Nicotiana tabacum HOM05D000586 ORTHO05D008681 4.6e-65 251.9 216 68.1
Actinidia20476 Actinidia chinensis HOM05D000586 ORTHO05D008681 6.1e-65 251.5 169 80.5
Nitab4.5_0002096g0050 Nicotiana tabacum HOM05D000586 ORTHO05D008681 6.1e-65 251.5 216 67.6
BcaNung04297 Brassica carinata HOM05D000586 ORTHO05D008681 3.0e-64 249.2 203 67.5
MELO3C020750.2 Cucumis melo HOM05D000586 ORTHO05D008681 3.0e-64 249.2 252 59.5
arahy.Tifrunner.gnm1.ann1.89FNHL Arachis hypogaea HOM05D000586 ORTHO05D008681 3.9e-64 248.8 170 80.0
BcaNung00666 Brassica carinata HOM05D000586 ORTHO05D008681 3.9e-64 248.8 169 78.7
SalBow6G4654 Salvia bowleyana HOM05D000586 ORTHO05D008681 3.9e-64 248.8 173 78.0
C01p04060 Brassica napus HOM05D000586 ORTHO05D003356 5.1e-64 248.4 169 78.1
Aqoxy5G01445 Aquilegia oxysepala HOM05D000586 ORTHO05D008681 1.1e-63 247.3 177 77.4
BolC1t00397H Brassica oleracea HOM05D000586 ORTHO05D003356 1.1e-63 247.3 168 78.6
BraA01t00363Z Brassica rapa HOM05D000586 ORTHO05D008681 1.1e-63 247.3 169 78.1
A01p03780 Brassica napus HOM05D000586 ORTHO05D003356 1.5e-63 246.9 169 77.5
Glyma.06G007300 Glycine max HOM05D000586 ORTHO05D008681 1.5e-63 246.9 169 78.7
Peaxi162Scf00362g01176 Petunia axillaris HOM05D000586 ORTHO05D008681 4.3e-63 245.4 210 68.6
MSTRG.20023 Avicennia marina HOM05D000586 ORTHO05D008681 9.7e-63 244.2 173 77.5
Lalb_Chr16g0391381 Lupinus albus HOM05D000586 ORTHO05D008681 1.3e-62 243.8 170 80.0
A03p63110 Brassica napus HOM05D000586 ORTHO05D001010 3.7e-62 242.3 202 65.8
BraA03t15387Z Brassica rapa HOM05D000586 ORTHO05D008681 3.7e-62 242.3 202 65.8
PGSC0003DMG400001616 Solanum tuberosum HOM05D000586 ORTHO05D008681 8.2e-62 241.1 169 79.3
arahy.Tifrunner.gnm1.ann1.I5P0FU Arachis hypogaea HOM05D000586 ORTHO05D008681 1.1e-61 240.7 166 79.5
PSO170G6416 Papaver somniferum HOM05D000586 ORTHO05D008681 1.8e-61 240.0 197 66.0
EL10Ac9g21609 Beta vulgaris HOM05D000586 ORTHO05D008681 2.4e-61 239.6 179 72.1
DCAR_022927 Daucus carota HOM05D000586 ORTHO05D008681 4.1e-61 238.8 174 74.7
PSO210G2611 Papaver somniferum HOM05D000586 ORTHO05D008681 4.1e-61 238.8 197 66.0
Gohir.A13G086800 Gossypium hirsutum HOM05D000586 ORTHO05D008681 1.2e-60 237.3 227 63.9
Oeu020677.1 Olea europaea HOM05D000586 ORTHO05D008681 1.2e-60 237.3 172 77.3
Ah.01g018630 Amaranthus hybridus HOM05D000586 ORTHO05D008681 2.6e-60 236.1 173 72.3
COL.COLO4_10614 Corchorus olitorius HOM05D000586 ORTHO05D008681 2.6e-60 236.1 206 66.5
Medtr3g117600 Medicago truncatula HOM05D000586 ORTHO05D008681 2.6e-60 236.1 181 71.8
Lsat_1_v5_gn_4_67621 Lactuca sativa HOM05D000586 ORTHO05D008681 5.9e-60 235.0 166 75.9
Solyc01g110550.3 Solanum lycopersicum HOM05D000586 ORTHO05D008681 2.9e-59 232.6 169 78.7
Ca_15328_v3 Cicer arietinum L. HOM05D000586 ORTHO05D008681 6.5e-59 231.5 181 71.8
ECA234G3975 Erigeron canadensis HOM05D000586 ORTHO05D008681 6.5e-59 231.5 157 79.0
Hund06294 Selenicereus undatus HOM05D000586 ORTHO05D008681 1.9e-58 229.9 175 68.0
Sopen01g052670 Solanum pennellii HOM05D000586 ORTHO05D008681 2.5e-58 229.6 169 78.1
Zm00001eb377790 Zea mays HOM05D000586 ORTHO05D008681 2.5e-58 229.6 183 68.9
CDE01G0237 Ceratophyllum demersum HOM05D000586 ORTHO05D008681 9.4e-58 227.6 219 63.5
Migut.B00127 Erythranthe guttata HOM05D000586 ORTHO05D008681 1.6e-57 226.9 175 73.1
CAN.G1329.7 Capsicum annuum HOM05D000586 ORTHO05D008681 2.1e-57 226.5 171 74.9
Hma1.2p1_0032F.1_g019990 Hydrangea macrophylla HOM05D000586 ORTHO05D008681 2.1e-57 226.5 128 89.8
Sc08g0000980 Simmondsia chinensis HOM05D000586 ORTHO05D008681 4.6e-57 225.3 176 71.0
AUR62010365 Chenopodium quinoa HOM05D000586 ORTHO05D008681 1.4e-56 223.8 169 74.0
Duzib132G1196 Durio zibethinus HOM05D000586 ORTHO05D008681 3.9e-56 222.2 249 55.8
AUR62016853 Chenopodium quinoa HOM05D000586 ORTHO05D008681 1.5e-55 220.3 169 72.8
HanXRQChr10g0294191 Helianthus annuus HOM05D000586 ORTHO05D008681 2.0e-55 219.9 182 68.7
Lj9A383T66 Lonicera japonica HOM05D000586 ORTHO05D008681 2.0e-55 219.9 143 81.1
Psat5g000280 Pisum sativum HOM05D000586 ORTHO05D008681 7.4e-55 218.0 180 67.8
VMungo1309G1424 Vigna mungo HOM05D000586 ORTHO05D008681 8.2e-54 214.5 135 80.7
GSVIVG01024154001 Vitis vinifera HOM05D000586 ORTHO05D008681 1.4e-53 213.8 147 81.0
CANSAT11G1696 Cannabis sativa HOM05D000586 ORTHO05D008681 1.8e-53 213.4 123 90.2
HPP92_020672 Vanilla planifolia HOM05D000586 ORTHO05D008681 4.1e-53 212.2 176 68.2
Os06g0137600 Oryza sativa ssp. japonica HOM05D000586 ORTHO05D008681 5.3e-53 211.8 208 59.6
unitig_60.g25431 Utricularia gibba HOM05D000586 ORTHO05D008681 2.0e-52 209.9 166 72.9
Cc02_g16800 Coffea canephora HOM05D000586 ORTHO05D008681 7.7e-52 208.0 147 77.6
Lj9A385G33 Lonicera japonica HOM05D000586 ORTHO05D008681 1.4e-50 203.8 131 81.7
SMO337G0057 Selaginella moellendorffii HOM05D000586 ORTHO05D008681 1.6e-49 200.3 168 66.1
vmacro02046 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 2.7e-49 199.5 127 80.3
vmacro22695 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 2.7e-49 199.5 127 80.3
Oeu046110.1 Olea europaea HOM05D000586 ORTHO05D008681 7.9e-49 198.0 156 73.7
SGA_v2.0_scaffold58G20435 Striga asiatica HOM05D000586 ORTHO05D008681 1.1e-47 194.1 261 47.5
Rhsim11G0184900 Rhododendron simsii HOM05D000586 ORTHO05D008681 4.4e-47 192.2 174 62.6
TPR.G32182 Trifolium pratense HOM05D000586 ORTHO05D008681 5.9e-44 181.8 148 66.2
AagrBONN_evm.TU.Sc2ySwM_228.435 Anthoceros agrestis HOM05D000586 ORTHO05D008681 8.5e-43 177.9 161 59.6
CBR_g38914 Chara braunii HOM05D000586 ORTHO05D008681 2.5e-42 176.4 147 60.5
Pp3c12_16410 Physcomitrium patens HOM05D000586 ORTHO05D008681 5.5e-42 175.3 171 55.6
Mapoly0005s0278 Marchantia polymorpha HOM05D000586 ORTHO05D008681 5.2e-40 168.7 145 60.7
Sed0014045 Sechium edule HOM05D000586 ORTHO05D008681 4.5e-36 155.6 165 58.2
CSS0047409 Camellia sinensis var. sinensis HOM05D000586 ORTHO05D008681 2.5e-34 149.8 106 74.5
MCO15G163 Micromonas commoda HOM05D000586 ORTHO05D008681 1.8e-32 143.7 168 48.8
Atru.chr5.3178 Acer truncatum HOM05D000586 ORTHO05D008681 6.3e-30 135.2 96 74.0
ATR0910G002 Amborella trichopoda HOM05D000586 ORTHO05D008681 5.0e-27 125.6 117 59.8
SEGI_30788 Sequoiadendron giganteum HOM05D000586 ORTHO05D008681 6.1e-25 118.6 98 58.2
Cre02.g145000 Chlamydomonas reinhardtii HOM05D000586 ORTHO05D008681 1.0e-24 117.9 152 45.4
Nn017s41473 Nelumbo nucifera HOM05D000586 ORTHO05D008681 5.2e-24 115.5 77 79.2
VMungo0720G0167 Vigna mungo HOM05D000028 ORTHO05D001812 5.7e-23 112.1 90 67.8
PRCOL_00004217 Prasinoderma coloniale HOM05D000586 ORTHO05D008681 7.0e-21 105.1 148 41.9
BcaB07g33434 Brassica carinata HOM05D000586 ORTHO05D008681 2.9e-19 99.8 71 76.1
MD10G1061600 Malus domestica HOM05D000586 ORTHO05D008681 1.1e-18 97.8 145 44.8
Haze_09241 Corylus avellana HOM05D007528 ORTHO05D006305 6.4e-06 55.5 70 44.3


User provided reference genes

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