Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p045794 Quercus lobata HOM05D006646 ORTHO05D008279 3.4e-135 485.3 310 100.0
CiPaw.06G130600 Carya illinoinensis HOM05D006646 ORTHO05D008279 1.4e-56 224.2 289 59.2
Haze_02302 Corylus avellana HOM05D006646 ORTHO05D008279 4.1e-56 222.6 358 55.9
Ciclev10028627m.g Citrus clementina HOM05D006646 ORTHO05D008279 1.6e-52 210.7 140 82.1
Thecc.02G077600 Theobroma cacao HOM05D006646 ORTHO05D008279 2.3e-51 206.8 236 54.2
Dinv23471 Davidia involucrata HOM05D006646 ORTHO05D008279 6.8e-51 205.3 185 66.5
COL.COLO4_26029 Corchorus olitorius HOM05D006646 ORTHO05D008279 1.2e-50 204.5 184 66.3
Cfa005079 Carpinus fangiana HOM05D006646 ORTHO05D008279 2.6e-50 203.4 141 80.1
Duzib132G1122 Durio zibethinus HOM05D006646 ORTHO05D008279 4.4e-50 202.6 250 53.6
Eucgr.G01718 Eucalyptus grandis HOM05D006646 ORTHO05D008279 4.4e-50 202.6 222 58.6
Potri.009G122500 Populus trichocarpa HOM05D006646 ORTHO05D008279 2.2e-49 200.3 185 65.4
Manes.04G084900 Manihot esculenta HOM05D006646 ORTHO05D008279 2.9e-49 199.9 246 60.6
Gohir.D12G030800 Gossypium hirsutum HOM05D006646 ORTHO05D008279 3.7e-49 199.5 165 67.3
Gohir.A12G041400 Gossypium hirsutum HOM05D006646 ORTHO05D008279 4.9e-49 199.1 241 55.6
Gorai.008G031700 Gossypium raimondii HOM05D006646 ORTHO05D008279 4.9e-49 199.1 165 67.3
CSS0027643 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 8.3e-49 198.4 254 53.1
TAR376G0115 Trochodendron aralioides HOM05D006646 ORTHO05D008279 8.3e-49 198.4 249 55.0
Prupe.8G087400 Prunus persica HOM05D006646 ORTHO05D008279 1.8e-48 197.2 273 50.2
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla HOM05D006646 ORTHO05D008279 3.2e-48 196.4 140 77.9
CSS0016085 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 5.4e-48 195.7 254 52.4
Sed0000071 Sechium edule HOM05D006646 ORTHO05D008279 5.4e-48 195.7 187 63.1
MELO3C013428.2 Cucumis melo HOM05D006646 ORTHO05D008279 1.6e-47 194.1 168 64.3
MD10G1065400 Malus domestica HOM05D006646 ORTHO05D008279 2.0e-47 193.7 229 52.0
Atru.chr5.3116 Acer truncatum HOM05D006646 ORTHO05D008279 7.8e-47 191.8 237 53.2
GSVIVG01024200001 Vitis vinifera HOM05D006646 ORTHO05D008279 7.8e-47 191.8 249 53.4
Cpa.g.sc150.36 Carica papaya HOM05D006646 ORTHO05D008279 1.0e-46 191.4 167 67.1
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea HOM05D006646 ORTHO05D008279 3.0e-46 189.9 164 63.4
Glyma.11G112300 Glycine max HOM05D006646 ORTHO05D008279 8.6e-46 188.3 212 55.7
PGR042G2699 Punica granatum HOM05D006646 ORTHO05D008279 1.9e-45 187.2 177 62.1
Aqoxy6G02397 Aquilegia oxysepala HOM05D006646 ORTHO05D008279 3.3e-45 186.4 172 62.8
ClCG02G004640 Citrullus lanatus HOM05D006646 ORTHO05D008279 1.2e-44 184.5 148 68.9
Nn6g32216 Nelumbo nucifera HOM05D006646 ORTHO05D008279 1.6e-44 184.1 180 60.6
TWI75G0841 Tripterygium wilfordii HOM05D006646 ORTHO05D008279 1.6e-44 184.1 260 52.3
CsaV3_7G000290 Cucumis sativus L. HOM05D006646 ORTHO05D008279 6.2e-44 182.2 243 51.4
Lj3g0021213 Lotus japonicus HOM05D006646 ORTHO05D008279 1.1e-43 181.4 157 65.0
VMungo1127G0939 Vigna mungo HOM05D006646 ORTHO05D008279 1.4e-43 181.0 181 60.8
Migut.B00188 Erythranthe guttata HOM05D006646 ORTHO05D008279 3.1e-43 179.9 195 54.9
Phvul.011G040400 Phaseolus vulgaris HOM05D006646 ORTHO05D008279 6.8e-43 178.7 238 50.4
MBI05_g30638_MAGBIO Magnolia biondii HOM05D006646 ORTHO05D008279 1.2e-42 177.9 142 66.9
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea HOM05D006646 ORTHO05D008279 1.5e-42 177.6 134 70.1
vmacro02064 Vaccinium macrocarpon HOM05D006646 ORTHO05D008279 1.5e-42 177.6 148 68.9
Lalb_Chr01g0002221 Lupinus albus HOM05D006646 ORTHO05D008279 2.0e-42 177.2 239 56.1
Sed0001649 Sechium edule HOM05D006646 ORTHO05D008279 2.0e-42 177.2 239 51.5
THA.LOC104807761 Tarenaya hassleriana HOM05D006646 ORTHO05D008279 2.6e-42 176.8 317 42.3
Oeu008579.1 Olea europaea HOM05D006646 ORTHO05D008279 3.4e-42 176.4 147 68.7
Psat0s2721g0040 Pisum sativum HOM05D006646 ORTHO05D008279 3.4e-42 176.4 172 56.4
TPR.G16241 Trifolium pratense HOM05D006646 ORTHO05D008279 3.4e-42 176.4 190 53.2
HanXRQChr05g0139661 Helianthus annuus HOM05D006646 ORTHO05D008279 7.5e-42 175.3 157 59.2
Cc02_g17030 Coffea canephora HOM05D006646 ORTHO05D008279 9.8e-42 174.9 186 55.4
Medtr4g071330 Medicago truncatula HOM05D006646 ORTHO05D008279 9.8e-42 174.9 152 61.2
CDE09G0634 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 1.3e-41 174.5 136 68.4
FAN27G0283 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.3e-41 174.5 211 51.2
MSTRG.16840 Avicennia marina HOM05D006646 ORTHO05D008279 1.7e-41 174.1 147 63.9
Peaxi162Scf00016g00142 Petunia axillaris HOM05D006646 ORTHO05D008279 1.7e-41 174.1 141 68.8
SGA_v2.0_scaffold58G20474 Striga asiatica HOM05D006646 ORTHO05D008279 1.7e-41 174.1 116 74.1
PSO541G0619 Papaver somniferum HOM05D006646 ORTHO05D008279 3.7e-41 172.9 135 69.6
RcHm_v2.0_Chr6g0267071 Rosa chinensis HOM05D006646 ORTHO05D008279 4.9e-41 172.6 224 53.6
Solyc01g110270.3 Solanum lycopersicum HOM05D006646 ORTHO05D008279 4.9e-41 172.6 237 50.2
Ca_20923_v3 Cicer arietinum L. HOM05D006646 ORTHO05D008279 6.4e-41 172.2 240 47.1
EL10Ac9g21659 Beta vulgaris HOM05D006646 ORTHO05D008279 8.3e-41 171.8 143 65.7
Lsat_1_v5_gn_4_68441 Lactuca sativa HOM05D006646 ORTHO05D008279 1.1e-40 171.4 155 60.6
CDE02G3850 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 3.2e-40 169.9 136 66.2
Sopen01g052420 Solanum pennellii HOM05D006646 ORTHO05D008279 3.2e-40 169.9 237 49.8
CAN.G170.87 Capsicum annuum HOM05D006646 ORTHO05D008279 7.0e-40 168.7 176 56.2
CARHR247710 Cardamine hirsuta HOM05D006646 ORTHO05D008279 7.0e-40 168.7 321 40.5
DCAR_022798 Daucus carota HOM05D006646 ORTHO05D008279 7.0e-40 168.7 242 49.6
ATR0661G343 Amborella trichopoda HOM05D006646 ORTHO05D008279 1.2e-39 167.9 161 59.0
FvH4_2g10110 Fragaria vesca HOM05D006646 ORTHO05D008279 1.2e-39 167.9 231 48.5
FAN15G0580 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.2e-39 167.9 231 48.5
BraA06t27738Z Brassica rapa HOM05D006646 ORTHO05D008279 2.1e-39 167.2 179 55.9
AUR62016804 Chenopodium quinoa HOM05D006646 ORTHO05D008279 4.6e-39 166.0 167 56.9
PGSC0003DMG400003128 Solanum tuberosum HOM05D006646 ORTHO05D008279 4.6e-39 166.0 256 45.3
A06p48720 Brassica napus HOM05D006646 ORTHO05D008279 6.0e-39 165.6 178 56.2
ECA247G1974 Erigeron canadensis HOM05D006646 ORTHO05D008279 1.0e-38 164.9 127 66.9
FAN24G1192 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.0e-38 164.9 231 48.1
SalBow6G1011 Salvia bowleyana HOM05D006646 ORTHO05D008279 1.3e-38 164.5 212 50.9
Nitab4.5_0010034g0020 Nicotiana tabacum HOM05D006646 ORTHO05D008279 3.0e-38 163.3 183 58.5
Sp7g36790 Schrenkiella parvula HOM05D006646 ORTHO05D008279 3.9e-38 162.9 187 54.0
Hund06269 Selenicereus undatus HOM05D006646 ORTHO05D008279 3.9e-38 162.9 187 51.9
Carub.0007s0091 Capsella rubella HOM05D006646 ORTHO05D008279 6.6e-38 162.2 187 53.5
BolC7t46749H Brassica oleracea HOM05D006646 ORTHO05D008279 1.5e-37 161.0 176 55.7
Sc18g0005310 Simmondsia chinensis HOM05D006646 ORTHO05D008279 9.5e-37 158.3 128 64.8
AL7G10980 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 2.1e-36 157.1 183 53.0
BcaNung01943 Brassica carinata HOM05D006646 ORTHO05D008279 2.1e-36 157.1 141 62.4
C07p63380 Brassica napus HOM05D006646 ORTHO05D008279 2.1e-36 157.1 141 62.4
Thhalv10025960m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 4.7e-36 156.0 136 64.0
unitig_32.g11060 Utricularia gibba HOM05D006646 ORTHO05D008279 6.2e-36 155.6 138 63.8
Aa31LG6G16210 Aethionema arabicum HOM05D006646 ORTHO05D008279 1.4e-35 154.5 138 61.6
AL4G10520 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 9.9e-34 148.3 103 73.8
AT4G39040 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 1.7e-33 147.5 116 66.4
CARHR112230 Cardamine hirsuta HOM05D006646 ORTHO05D008279 2.2e-33 147.1 99 76.8
AT2G21350 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 4.9e-33 146.0 101 72.3
Carub.0004s0039 Capsella rubella HOM05D006646 ORTHO05D008279 4.1e-32 142.9 263 41.4
Os10g0512500 Oryza sativa ssp. japonica HOM05D006646 ORTHO05D008279 2.7e-31 140.2 110 64.5
BolC4t26655H Brassica oleracea HOM05D006646 ORTHO05D008279 1.3e-30 137.9 181 48.6
BcaC02g08796 Brassica carinata HOM05D006646 ORTHO05D008279 5.1e-30 136.0 181 48.1
C04p50570 Brassica napus HOM05D006646 ORTHO05D008279 5.1e-30 136.0 181 48.1
A04p16110 Brassica napus HOM05D006646 ORTHO05D008279 2.5e-29 133.7 178 46.1
BraA04t17251Z Brassica rapa HOM05D006646 ORTHO05D008279 2.5e-29 133.7 178 46.1
Thhalv10000312m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 4.3e-29 132.9 96 70.8
Sp4g00530 Schrenkiella parvula HOM05D006646 ORTHO05D008279 7.3e-29 132.1 98 68.4
HPP92_007403 Vanilla planifolia HOM05D006646 ORTHO05D008279 3.1e-27 126.7 240 42.1
AUR62010412 Chenopodium quinoa HOM05D006646 ORTHO05D008279 2.9e-25 120.2 135 52.6
Nitab4.5_0002723g0110 Nicotiana tabacum HOM05D006646 ORTHO05D008279 3.8e-25 119.8 107 67.3
Mapoly0113s0060 Marchantia polymorpha HOM05D006646 ORTHO05D008279 1.8e-19 100.9 101 46.5
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea HOM05D006646 ORTHO05D008279 1.5e-18 97.8 55 87.3
FAN24G0918 Fragaria x ananassa HOM05D001806 ORTHO05D002069 1.5e-18 97.8 98 54.1
CANSAT11G0453 Cannabis sativa HOM05D006646 ORTHO05D008279 7.6e-18 95.5 83 66.3
FAN05G0067 Fragaria x ananassa HOM05D006646 ORTHO05D008279 7.6e-18 95.5 61 73.8
FAN05G1359 Fragaria x ananassa HOM05D006646 ORTHO05D008279 7.6e-18 95.5 61 73.8
FAN09G3166 Fragaria x ananassa HOM05D006646 ORTHO05D008279 9.9e-18 95.1 83 59.0
Pp3c1_22260 Physcomitrium patens HOM05D006646 ORTHO05D008279 1.3e-17 94.7 181 37.6
FAN18G1095 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.2e-17 94.0 59 74.6
FAN19G2814 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.9e-17 93.6 81 60.5
CBR_g11057 Chara braunii HOM05D006646 ORTHO05D008279 3.2e-16 90.1 96 44.8
BcaNung01286 Brassica carinata HOM05D006646 ORTHO05D008279 1.2e-15 88.2 109 53.2
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis HOM05D006646 ORTHO05D008279 1.6e-15 87.8 109 41.3
Haze_22123 Corylus avellana HOM05D006646 ORTHO05D008279 6.6e-14 82.4 48 87.5
Lj5P190T58 Lonicera japonica HOM05D006646 ORTHO05D008279 2.1e-12 77.4 53 73.6
Zm00001eb220380 Zea mays HOM05D006646 ORTHO05D008279 1.1e-11 75.1 51 72.5
SMO367G1025 Selaginella moellendorffii HOM05D006646 ORTHO05D008279 4.9e-09 66.2 80 42.5


User provided reference genes

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