Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p043997 Quercus lobata HOM05D006439 ORTHO05D008152 1.3e-31 139.0 67 100.0
QL07p039851 Quercus lobata HOM05D006439 ORTHO05D008152 2.4e-14 81.6 64 65.6
Cfa016567 Carpinus fangiana HOM05D006439 ORTHO05D008152 8.7e-12 73.2 44 79.5
CiPaw.09G010200 Carya illinoinensis HOM05D006439 ORTHO05D008152 1.9e-11 72.0 61 60.7
Atru.chr8.1601 Acer truncatum HOM05D006439 ORTHO05D008152 2.4e-09 65.1 67 50.7
Lalb_Chr01g0018261 Lupinus albus HOM05D006439 ORTHO05D008152 5.8e-08 60.5 44 65.9
Glyma.03G192900 Glycine max HOM05D006439 ORTHO05D008152 1.0e-07 59.7 44 63.6
Medtr7g104170 Medicago truncatula HOM05D006439 ORTHO05D008152 1.3e-07 59.3 37 73.0
TAR623G1631 Trochodendron aralioides HOM05D006439 ORTHO05D008152 1.3e-07 59.3 44 68.2
arahy.Tifrunner.gnm1.ann1.JQB9X3 Arachis hypogaea HOM05D006439 ORTHO05D008152 1.7e-07 58.9 37 73.0
arahy.Tifrunner.gnm1.ann1.YQ8CLY Arachis hypogaea HOM05D006439 ORTHO05D008152 1.7e-07 58.9 37 73.0
Ciclev10011131m.g Citrus clementina HOM05D006439 ORTHO05D008152 2.2e-07 58.5 46 58.7
Gohir.D11G340900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 2.2e-07 58.5 44 68.2
Gorai.007G371000 Gossypium raimondii HOM05D006439 ORTHO05D008152 2.2e-07 58.5 44 68.2
Psat3g034720 Pisum sativum HOM05D006439 ORTHO05D008152 2.9e-07 58.2 44 61.4
Haze_19565 Corylus avellana HOM05D006439 ORTHO05D008152 3.8e-07 57.8 87 48.3
Prupe.7G115000 Prunus persica HOM05D006439 ORTHO05D008152 3.8e-07 57.8 44 59.1
TPR.G19544 Trifolium pratense HOM05D006439 ORTHO05D008152 3.8e-07 57.8 58 55.2
Lj1g0012097 Lotus japonicus HOM05D006439 ORTHO05D008152 6.5e-07 57.0 58 51.7
Duzib093G0471 Durio zibethinus HOM05D006439 ORTHO05D008152 8.4e-07 56.6 44 63.6
MD12G1021400 Malus domestica HOM05D006439 ORTHO05D008152 1.1e-06 56.2 44 59.1
Thecc.05G084500 Theobroma cacao HOM05D006439 ORTHO05D008152 1.1e-06 56.2 44 61.4
Phvul.001G188000 Phaseolus vulgaris HOM05D006439 ORTHO05D008152 1.4e-06 55.8 63 49.2
Lj3A1001T29 Lonicera japonica HOM05D006439 ORTHO05D008152 1.9e-06 55.5 47 59.6
Gohir.A11G321900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 3.2e-06 54.7 44 65.9
RcHm_v2.0_Chr3g0472491 Rosa chinensis HOM05D006439 ORTHO05D008152 4.2e-06 54.3 46 56.5
TWI74G0883 Tripterygium wilfordii HOM05D006439 ORTHO05D008152 4.2e-06 54.3 44 56.8
VMungo1383G0775 Vigna mungo HOM05D006439 ORTHO05D008152 7.1e-06 53.5 34 73.5
Hma1.2p1_0232F.1_g097640 Hydrangea macrophylla HOM05D006439 ORTHO05D008152 9.3e-06 53.1 65 46.2


User provided reference genes

Program Settings