Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p043964 Quercus lobata HOM05D000142 ORTHO05D000124 5.3e-14 81.3 111 100.0
MD10G1075500 Malus domestica HOM05D000142 ORTHO05D000124 3.3e-08 62.0 39 97.4
CiPaw.06G135000 Carya illinoinensis HOM05D000142 ORTHO05D000124 9.7e-08 60.5 29 100.0
CANSAT01G2156 Cannabis sativa HOM05D000142 ORTHO05D000124 1.3e-07 60.1 39 94.9
CiPaw.05G065000 Carya illinoinensis HOM05D000142 ORTHO05D000124 2.2e-07 59.3 29 96.6
Potri.004G155300 Populus trichocarpa HOM05D000142 ORTHO05D000124 2.8e-07 58.9 39 89.7
Sabra09G0089400 Salix brachista HOM05D000142 ORTHO05D000124 2.8e-07 58.9 39 92.3
TWI31G0254 Tripterygium wilfordii HOM05D000142 ORTHO05D000124 2.8e-07 58.9 39 92.3
CDE02G1682 Ceratophyllum demersum HOM05D000142 ORTHO05D000124 3.7e-07 58.5 29 96.6
Manes.17G101400 Manihot esculenta HOM05D000142 ORTHO05D000124 3.7e-07 58.5 29 96.6
Nitab4.5_0002978g0030 Nicotiana tabacum HOM05D000142 ORTHO05D000124 3.7e-07 58.5 29 96.6
PSO541G2993 Papaver somniferum HOM05D000142 ORTHO05D000124 3.7e-07 58.5 29 96.6
PSO675G2854 Papaver somniferum HOM05D000142 ORTHO05D000124 3.7e-07 58.5 29 96.6
Prupe.8G096400 Prunus persica HOM05D000142 ORTHO05D000124 3.7e-07 58.5 29 96.6
TWI75G1009 Tripterygium wilfordii HOM05D000142 ORTHO05D000124 3.7e-07 58.5 29 96.6
GSVIVG01031973001 Vitis vinifera HOM05D000142 ORTHO05D000124 4.8e-07 58.2 29 96.6
Manes.15G163200 Manihot esculenta HOM05D000142 ORTHO05D000124 8.2e-07 57.4 29 93.1
VMungo1127G0622 Vigna mungo HOM05D000142 ORTHO05D000124 8.2e-07 57.4 29 93.1
Atru.BG.67.p Acer truncatum HOM05D000142 ORTHO05D000124 1.4e-06 56.6 28 96.4
Actinidia00528 Actinidia chinensis HOM05D000142 ORTHO05D000124 1.4e-06 56.6 29 93.1
CSS0018150 Camellia sinensis var. sinensis HOM05D000142 ORTHO05D000124 1.4e-06 56.6 29 93.1
CSS0035708 Camellia sinensis var. sinensis HOM05D000142 ORTHO05D000124 1.4e-06 56.6 29 93.1
CDE02G3790 Ceratophyllum demersum HOM05D000142 ORTHO05D000124 1.4e-06 56.6 29 93.1
CDE04G2192 Ceratophyllum demersum HOM05D000142 ORTHO05D000124 1.4e-06 56.6 29 93.1
FvH4_2g08880 Fragaria vesca HOM05D000142 ORTHO05D000124 1.4e-06 56.6 29 93.1
FAN15G3399 Fragaria x ananassa HOM05D000142 ORTHO05D000124 1.4e-06 56.6 29 93.1
FAN20G0234 Fragaria x ananassa HOM05D000142 ORTHO05D000124 1.4e-06 56.6 29 93.1
FAN24G0896 Fragaria x ananassa HOM05D000142 ORTHO05D000124 1.4e-06 56.6 29 93.1
FAN27G3102 Fragaria x ananassa HOM05D000142 ORTHO05D000124 1.4e-06 56.6 29 93.1
Glyma.11G117400 Glycine max HOM05D000142 ORTHO05D000124 1.4e-06 56.6 28 96.4
MBI16_g34181_MAGBIO Magnolia biondii HOM05D000142 ORTHO05D000124 1.4e-06 56.6 29 93.1
MBI19_g36231_MAGBIO Magnolia biondii HOM05D000142 ORTHO05D000124 1.4e-06 56.6 29 93.1
Nitab4.5_0000308g0150 Nicotiana tabacum HOM05D000142 ORTHO05D000124 1.4e-06 56.6 29 93.1
Nitab4.5_0003919g0010 Nicotiana tabacum HOM05D000142 ORTHO05D000124 1.4e-06 56.6 29 93.1
Nitab4.5_0013685g0010 Nicotiana tabacum HOM05D000142 ORTHO05D000124 1.4e-06 56.6 29 93.1
PSO675G7459 Papaver somniferum HOM05D000142 ORTHO05D000124 1.4e-06 56.6 28 96.4
Peaxi162Scf00684g00327 Petunia axillaris HOM05D000142 ORTHO05D000124 1.4e-06 56.6 29 93.1
Prupe.3G163600 Prunus persica HOM05D000142 ORTHO05D000124 1.4e-06 56.6 29 89.7
RcHm_v2.0_Chr6g0264491 Rosa chinensis HOM05D000142 ORTHO05D000124 1.4e-06 56.6 29 93.1
Actinidia17815 Actinidia chinensis HOM05D000142 ORTHO05D000124 1.8e-06 56.2 29 93.1
ATR0772G182 Amborella trichopoda HOM05D000142 ORTHO05D000124 1.8e-06 56.2 29 93.1
arahy.Tifrunner.gnm1.ann1.05X33F Arachis hypogaea HOM05D000142 ORTHO05D000124 1.8e-06 56.2 27 100.0
arahy.Tifrunner.gnm1.ann1.SN2AIN Arachis hypogaea HOM05D000142 ORTHO05D000124 1.8e-06 56.2 27 100.0
CiPaw.13G023300 Carya illinoinensis HOM05D000142 ORTHO05D000124 1.8e-06 56.2 29 93.1
Cc00_g34700 Coffea canephora HOM05D000142 ORTHO05D000124 1.8e-06 56.2 29 93.1
Cc02_g17520 Coffea canephora HOM05D000142 ORTHO05D000124 1.8e-06 56.2 29 93.1
DCAR_001576 Daucus carota HOM05D000142 ORTHO05D000124 1.8e-06 56.2 29 93.1
Duzib132G1167 Durio zibethinus HOM05D000142 ORTHO05D000124 1.8e-06 56.2 42 73.8
Glyma.06G012600 Glycine max HOM05D000142 ORTHO05D000124 1.8e-06 56.2 27 100.0
MBI14_g10722_MAGBIO Magnolia biondii HOM05D000142 ORTHO05D000124 1.8e-06 56.2 29 89.7
Peaxi162Scf00003g01226 Petunia axillaris HOM05D000142 ORTHO05D000124 1.8e-06 56.2 29 93.1
Phvul.009G023700 Phaseolus vulgaris HOM05D000142 ORTHO05D000124 1.8e-06 56.2 27 100.0
SalBow3G4446 Salvia bowleyana HOM05D000142 ORTHO05D000124 1.8e-06 56.2 29 93.1
Medtr4g070190 Medicago truncatula HOM05D000142 ORTHO05D000124 2.4e-06 55.8 29 89.7
Psat7g140760 Pisum sativum HOM05D000142 ORTHO05D000124 2.4e-06 55.8 29 89.7
CSS0037631 Camellia sinensis var. sinensis HOM05D000142 ORTHO05D000124 3.1e-06 55.5 29 89.7
Ca_20887_v3 Cicer arietinum L. HOM05D000142 ORTHO05D000124 3.1e-06 55.5 29 89.7
Glyma.11G117500 Glycine max HOM05D000142 ORTHO05D000124 3.1e-06 55.5 28 92.9
Gohir.A12G029000 Gossypium hirsutum HOM05D000142 ORTHO05D000124 3.1e-06 55.5 29 93.1
Gohir.A13G034000 Gossypium hirsutum HOM05D000142 ORTHO05D000124 3.1e-06 55.5 29 93.1
Gohir.D12G028500 Gossypium hirsutum HOM05D000142 ORTHO05D000124 3.1e-06 55.5 29 93.1
Gohir.D13G032300 Gossypium hirsutum HOM05D000142 ORTHO05D000124 3.1e-06 55.5 29 93.1
Gorai.013G036800 Gossypium raimondii HOM05D000142 ORTHO05D000124 3.1e-06 55.5 29 93.1
Lj9A370T40 Lonicera japonica HOM05D000142 ORTHO05D000124 3.1e-06 55.5 29 89.7
Lj9A372T33 Lonicera japonica HOM05D000142 ORTHO05D000124 3.1e-06 55.5 29 89.7
Nn5g29616 Nelumbo nucifera HOM05D000142 ORTHO05D000124 3.1e-06 55.5 28 92.9
Psat5g007400 Pisum sativum HOM05D000142 ORTHO05D000124 3.1e-06 55.5 29 89.7
Potri.009G116400 Populus trichocarpa HOM05D000142 ORTHO05D000124 3.1e-06 55.5 29 89.7
Rhsim05G0074000 Rhododendron simsii HOM05D000142 ORTHO05D000124 3.1e-06 55.5 29 89.7
Thecc.02G084800 Theobroma cacao HOM05D000142 ORTHO05D000124 3.1e-06 55.5 29 93.1
TAR625G0947 Trochodendron aralioides HOM05D000142 ORTHO05D000124 3.1e-06 55.5 29 89.7
Carub.0004s0071 Capsella rubella HOM05D000142 ORTHO05D000124 4.1e-06 55.1 29 89.7
CiPaw.13G074200 Carya illinoinensis HOM05D000142 ORTHO05D000124 4.1e-06 55.1 29 89.7
Dinv23516 Davidia involucrata HOM05D000142 ORTHO05D000124 4.1e-06 55.1 29 89.7
Glyma.11G117300 Glycine max HOM05D000142 ORTHO05D000124 4.1e-06 55.1 27 96.3
Nitab4.5_0001361g0220 Nicotiana tabacum HOM05D000142 ORTHO05D000124 4.1e-06 55.1 29 89.7
Oeu020749.1 Olea europaea HOM05D000142 ORTHO05D000124 4.1e-06 55.1 29 89.7
Oeu041640.1 Olea europaea HOM05D000142 ORTHO05D000124 4.1e-06 55.1 29 89.7
Migut.N01242 Erythranthe guttata HOM05D000142 ORTHO05D000124 5.3e-06 54.7 29 89.7
Oeu020752.2 Olea europaea HOM05D000142 ORTHO05D000124 5.3e-06 54.7 29 89.7
Phvul.011G045000 Phaseolus vulgaris HOM05D000142 ORTHO05D000124 5.3e-06 54.7 27 96.3
Actinidia27893 Actinidia chinensis HOM05D000142 ORTHO05D000124 6.9e-06 54.3 27 96.3
MSTRG.5400 Avicennia marina HOM05D000142 ORTHO05D000124 6.9e-06 54.3 29 89.7
HanXRQChr16g0505631 Helianthus annuus HOM05D000142 ORTHO05D000124 6.9e-06 54.3 29 89.7
Lalb_Chr19g0138641 Lupinus albus HOM05D000142 ORTHO05D000124 6.9e-06 54.3 29 86.2
Psat0s1618g0040 Pisum sativum HOM05D000142 ORTHO05D000124 6.9e-06 54.3 29 86.2
Rhsim11G0177800 Rhododendron simsii HOM05D000142 ORTHO05D000124 6.9e-06 54.3 27 96.3
Solyc01g109660.2 Solanum lycopersicum HOM05D000142 ORTHO05D000124 6.9e-06 54.3 27 96.3
Solyc10g051373.1 Solanum lycopersicum HOM05D000142 ORTHO05D000124 6.9e-06 54.3 29 89.7
Sopen01g051850 Solanum pennellii HOM05D000142 ORTHO05D000124 6.9e-06 54.3 27 96.3
Sopen10g023060 Solanum pennellii HOM05D000142 ORTHO05D000124 6.9e-06 54.3 29 89.7
PGSC0003DMG400000708 Solanum tuberosum HOM05D000142 ORTHO05D000124 6.9e-06 54.3 27 96.3
PGSC0003DMG400033020 Solanum tuberosum HOM05D000142 ORTHO05D000124 6.9e-06 54.3 29 89.7
PGSC0003DMG400033902 Solanum tuberosum HOM05D000142 ORTHO05D000124 6.9e-06 54.3 29 89.7
PGSC0003DMG400033915 Solanum tuberosum HOM05D000142 ORTHO05D000124 6.9e-06 54.3 29 89.7
TPR.G38195 Trifolium pratense HOM05D000142 ORTHO05D000124 6.9e-06 54.3 29 86.2
Aqoxy4G02487 Aquilegia oxysepala HOM05D000142 ORTHO05D000124 9.1e-06 53.9 29 89.7
MSTRG.27697 Avicennia marina HOM05D000142 ORTHO05D000124 9.1e-06 53.9 29 89.7
Hund00262 Selenicereus undatus HOM05D000142 ORTHO05D000124 9.1e-06 53.9 29 89.7
THA.LOC104824824 Tarenaya hassleriana HOM05D000142 ORTHO05D000124 9.1e-06 53.9 29 89.7
TPR.G19416 Trifolium pratense HOM05D000142 ORTHO05D000124 9.1e-06 53.9 29 86.2


User provided reference genes

Program Settings