Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p043069 Quercus lobata HOM05D005136 ORTHO05D006619 4.9e-94 347.8 178 100.0
Duzib132G0024 Durio zibethinus HOM05D005136 ORTHO05D006619 2.6e-63 245.7 143 87.4
COL.COLO4_32439 Corchorus olitorius HOM05D005136 ORTHO05D006619 7.6e-63 244.2 144 87.5
Cfa005022 Carpinus fangiana HOM05D005136 ORTHO05D006619 1.3e-62 243.4 145 87.6
Haze_02365 Corylus avellana HOM05D005136 ORTHO05D006619 1.3e-62 243.4 145 87.6
ClCG11G004520 Citrullus lanatus HOM05D005136 ORTHO05D006619 4.9e-62 241.5 146 87.7
Sed0024996 Sechium edule HOM05D005136 ORTHO05D006619 1.1e-61 240.4 146 87.0
MELO3C020986.2 Cucumis melo HOM05D005136 ORTHO05D006619 1.4e-61 240.0 146 87.7
Thecc.02G123900 Theobroma cacao HOM05D005136 ORTHO05D006619 1.4e-61 240.0 145 86.2
CsaV3_2G014570 Cucumis sativus L. HOM05D005136 ORTHO05D006619 2.4e-61 239.2 146 87.7
FAN15G2434 Fragaria x ananassa HOM05D005136 ORTHO05D006619 1.6e-60 236.5 145 84.1
MD05G1068400 Malus domestica HOM05D005136 ORTHO05D006619 7.8e-60 234.2 145 82.8
RcHm_v2.0_Chr6g0263731 Rosa chinensis HOM05D005136 ORTHO05D006619 7.8e-60 234.2 143 85.3
VMungo1215G0362 Vigna mungo HOM05D005136 ORTHO05D006619 1.0e-59 233.8 146 86.3
Potri.004G152700 Populus trichocarpa HOM05D005136 ORTHO05D006619 1.3e-59 233.4 146 82.9
FvH4_2g08450 Fragaria vesca HOM05D005136 ORTHO05D006619 1.7e-59 233.0 143 84.6
FAN24G0166 Fragaria x ananassa HOM05D005136 ORTHO05D006619 1.7e-59 233.0 143 84.6
FAN27G1698 Fragaria x ananassa HOM05D005136 ORTHO05D006619 1.7e-59 233.0 144 84.0
Cpa.g.sc31.66 Carica papaya HOM05D005136 ORTHO05D006619 2.3e-59 232.6 145 83.4
Phvul.002G127500 Phaseolus vulgaris HOM05D005136 ORTHO05D006619 3.0e-59 232.3 146 86.3
CiPaw.05G062700 Carya illinoinensis HOM05D005136 ORTHO05D006619 5.1e-59 231.5 145 84.1
Dinv23543 Davidia involucrata HOM05D005136 ORTHO05D006619 6.6e-59 231.1 145 82.8
Lj3g0003138 Lotus japonicus HOM05D005136 ORTHO05D006619 6.6e-59 231.1 145 86.2
Ciclev10029521m.g Citrus clementina HOM05D005136 ORTHO05D006619 8.7e-59 230.7 145 83.4
Manes.17G099700 Manihot esculenta HOM05D005136 ORTHO05D006619 1.1e-58 230.3 146 84.2
Gohir.D12G018500 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.5e-58 229.9 145 84.1
Gorai.008G018800 Gossypium raimondii HOM05D005136 ORTHO05D006619 1.5e-58 229.9 145 84.1
vmacro08119 Vaccinium macrocarpon HOM05D005136 ORTHO05D006619 1.5e-58 229.9 145 83.4
Rhsim11G0174400 Rhododendron simsii HOM05D005136 ORTHO05D006619 1.9e-58 229.6 157 78.3
Gohir.A12G017900 Gossypium hirsutum HOM05D005136 ORTHO05D006619 2.5e-58 229.2 145 83.4
Prupe.8G100500 Prunus persica HOM05D005136 ORTHO05D006619 2.5e-58 229.2 144 84.7
MD10G1078600 Malus domestica HOM05D005136 ORTHO05D006619 3.3e-58 228.8 144 81.9
Glyma.04G123300 Glycine max HOM05D005136 ORTHO05D006619 4.3e-58 228.4 146 84.9
CiPaw.06G136800 Carya illinoinensis HOM05D005136 ORTHO05D006619 9.6e-58 227.3 145 83.4
Nitab4.5_0009564g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 1.6e-57 226.5 146 80.8
Atru.chr8.1229 Acer truncatum HOM05D005136 ORTHO05D006619 3.6e-57 225.3 144 82.6
Cc02_g17760 Coffea canephora HOM05D005136 ORTHO05D006619 3.6e-57 225.3 145 82.8
Hma1.2p1_1375F.1_g278970 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 4.8e-57 224.9 146 80.1
Hma1.2p1_3179F.1_g333696 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 4.8e-57 224.9 146 80.1
Hund22263 Selenicereus undatus HOM05D005136 ORTHO05D006619 4.8e-57 224.9 144 81.9
Dinv42084 Davidia involucrata HOM05D005136 ORTHO05D006619 1.1e-56 223.8 145 81.4
TAR628G0554 Trochodendron aralioides HOM05D005136 ORTHO05D006619 1.4e-56 223.4 145 78.6
TAR628G1226 Trochodendron aralioides HOM05D005136 ORTHO05D006619 1.4e-56 223.4 145 78.6
DCAR_026977 Daucus carota HOM05D005136 ORTHO05D006619 1.8e-56 223.0 145 79.3
Nn1g02125 Nelumbo nucifera HOM05D005136 ORTHO05D006619 1.8e-56 223.0 143 79.7
TAR625G1013 Trochodendron aralioides HOM05D005136 ORTHO05D006619 1.8e-56 223.0 145 80.0
Cc02_g20820 Coffea canephora HOM05D005136 ORTHO05D006619 5.3e-56 221.5 145 82.1
Lj5P199T42 Lonicera japonica HOM05D005136 ORTHO05D006619 5.3e-56 221.5 143 81.1
CSS0002049 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 1.5e-55 219.9 145 80.7
CSS0016345 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 1.5e-55 219.9 145 80.7
CSS0049550 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 1.5e-55 219.9 145 80.7
Ca_15377_v3 Cicer arietinum L. HOM05D005136 ORTHO05D006619 2.6e-55 219.2 146 80.8
Ah.01g016850 Amaranthus hybridus HOM05D005136 ORTHO05D006619 3.4e-55 218.8 145 79.3
Eucgr.G00447 Eucalyptus grandis HOM05D005136 ORTHO05D006619 5.8e-55 218.0 145 77.9
Lalb_Chr23g0265461 Lupinus albus HOM05D005136 ORTHO05D006619 9.9e-55 217.2 146 78.1
CANSAT11G0677 Cannabis sativa HOM05D005136 ORTHO05D006619 1.3e-54 216.9 154 77.3
MBI16_g37741_MAGBIO Magnolia biondii HOM05D005136 ORTHO05D006619 1.3e-54 216.9 144 79.9
Peaxi162Scf00346g00043 Petunia axillaris HOM05D005136 ORTHO05D006619 1.3e-54 216.9 145 78.6
Lalb_Chr19g0138591 Lupinus albus HOM05D005136 ORTHO05D006619 1.7e-54 216.5 144 80.6
Sc09g0004050 Simmondsia chinensis HOM05D005136 ORTHO05D006619 1.7e-54 216.5 147 78.2
Glyma.09G214900 Glycine max HOM05D005136 ORTHO05D006619 2.2e-54 216.1 139 84.9
CSS0025161 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 2.9e-54 215.7 145 79.3
Medtr3g116260 Medicago truncatula HOM05D005136 ORTHO05D006619 3.8e-54 215.3 148 78.4
Oeu014338.1 Olea europaea HOM05D005136 ORTHO05D006619 8.4e-54 214.2 145 76.6
SalBow6G6037 Salvia bowleyana HOM05D005136 ORTHO05D006619 8.4e-54 214.2 173 68.2
EL10Ac9g21088 Beta vulgaris HOM05D005136 ORTHO05D006619 1.4e-53 213.4 136 82.4
Solyc08g078240.4 Solanum lycopersicum HOM05D005136 ORTHO05D006619 1.4e-53 213.4 144 78.5
Sopen08g026750 Solanum pennellii HOM05D005136 ORTHO05D006619 1.4e-53 213.4 146 77.4
Migut.B00252 Erythranthe guttata HOM05D005136 ORTHO05D006619 2.4e-53 212.6 145 75.9
CAN.G1312.12 Capsicum annuum HOM05D005136 ORTHO05D006619 3.2e-53 212.2 145 77.9
PGSC0003DMG400026262 Solanum tuberosum HOM05D005136 ORTHO05D006619 3.2e-53 212.2 146 77.4
SGA_v2.0_scaffold106G30693 Striga asiatica HOM05D005136 ORTHO05D006619 7.1e-53 211.1 145 77.9
PSO700G0271 Papaver somniferum HOM05D005136 ORTHO05D006619 9.3e-53 210.7 145 77.2
Psat5g103000 Pisum sativum HOM05D005136 ORTHO05D006619 1.2e-52 210.3 145 78.6
Psat5g007800 Pisum sativum HOM05D005136 ORTHO05D006619 2.1e-52 209.5 145 77.9
Aqoxy5G01670 Aquilegia oxysepala HOM05D005136 ORTHO05D006619 3.5e-52 208.8 148 73.6
PGR042G3747 Punica granatum HOM05D005136 ORTHO05D006619 4.6e-52 208.4 146 76.7
AUR62038311 Chenopodium quinoa HOM05D005136 ORTHO05D006619 7.9e-52 207.6 144 75.7
ATR1120G109 Amborella trichopoda HOM05D005136 ORTHO05D006619 1.0e-51 207.2 148 73.6
AUR62023928 Chenopodium quinoa HOM05D005136 ORTHO05D006619 1.8e-51 206.5 144 75.7
Lsat_1_v5_gn_7_89621 Lactuca sativa HOM05D005136 ORTHO05D006619 3.0e-51 205.7 159 71.7
TWI31G0294 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 3.9e-51 205.3 149 77.2
THA.LOC104823526 Tarenaya hassleriana HOM05D005136 ORTHO05D006619 6.7e-51 204.5 149 74.5
TWI79G0765 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 8.7e-51 204.1 151 75.5
HanXRQChr05g0152051 Helianthus annuus HOM05D005136 ORTHO05D006619 1.9e-50 203.0 146 76.0
MSTRG.16796 Avicennia marina HOM05D005136 ORTHO05D006619 2.5e-50 202.6 145 75.2
Gorai.005G228100 Gossypium raimondii HOM05D005136 ORTHO05D006619 2.5e-50 202.6 143 75.5
Gohir.A03G179300 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.3e-49 200.3 143 74.8
Gohir.D02G202838 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.3e-49 200.3 143 74.8
Aa31LG1G2990 Aethionema arabicum HOM05D005136 ORTHO05D006619 1.1e-48 197.2 148 70.9
Thhalv10008721m.g Eutrema salsugineum HOM05D005136 ORTHO05D006619 1.8e-48 196.4 157 69.4
HPP92_013432 Vanilla planifolia HOM05D005136 ORTHO05D006619 1.8e-48 196.4 149 71.1
HPP92_027116 Vanilla planifolia HOM05D005136 ORTHO05D006619 1.8e-48 196.4 149 71.1
BcaB03g13232 Brassica carinata HOM05D005136 ORTHO05D006619 5.3e-48 194.9 151 72.2
Sp1g10380 Schrenkiella parvula HOM05D005136 ORTHO05D006619 5.3e-48 194.9 152 71.1
Nn1g05055 Nelumbo nucifera HOM05D005136 ORTHO05D006619 6.9e-48 194.5 144 72.9
AT1G11760 Arabidopsis thaliana HOM05D005136 ORTHO05D006619 9.0e-48 194.1 152 69.7
CARHR012080 Cardamine hirsuta HOM05D005136 ORTHO05D006619 1.2e-47 193.7 151 71.5
AL1G22940 Arabidopsis lyrata HOM05D005136 ORTHO05D006619 2.0e-47 193.0 154 69.5
Carub.0001s1142 Capsella rubella HOM05D005136 ORTHO05D006619 1.7e-46 189.9 153 68.6
BolC8t49124H Brassica oleracea HOM05D004968 ORTHO05D005922 8.4e-46 187.6 147 71.4
C08p14950 Brassica napus HOM05D004968 ORTHO05D005922 2.4e-45 186.0 147 70.7
Actinidia00512 Actinidia chinensis HOM05D005136 ORTHO05D006619 7.1e-45 184.5 126 78.6
unitig_37.g12818 Utricularia gibba HOM05D005136 ORTHO05D006619 1.0e-43 180.6 152 65.8
A08p33240 Brassica napus HOM05D004968 ORTHO05D005922 3.9e-43 178.7 140 70.0
BraA08t35243Z Brassica rapa HOM05D004968 ORTHO05D005922 3.9e-43 178.7 140 70.0
Prupe.5G020100 Prunus persica HOM05D005136 ORTHO05D006619 4.8e-41 171.8 150 63.3
PSO170G5319 Papaver somniferum HOM05D005136 ORTHO05D006619 3.1e-40 169.1 110 81.8
Nitab4.5_0002601g0030 Nicotiana tabacum HOM05D005136 ORTHO05D006619 1.2e-39 167.2 109 81.7
ECA236G0931 Erigeron canadensis HOM05D005136 ORTHO05D006619 1.5e-39 166.8 147 63.9
Os10g0548400 Oryza sativa ssp. japonica HOM05D005136 ORTHO05D006619 3.4e-39 165.6 163 57.1
SalBow6G1117 Salvia bowleyana HOM05D005136 ORTHO05D006619 1.7e-38 163.3 133 68.4
TPR.G21542 Trifolium pratense HOM05D005136 ORTHO05D006619 1.7e-38 163.3 146 64.4
CSS0021040 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 6.5e-38 161.4 137 67.9
RcHm_v2.0_Chr6g0264001 Rosa chinensis HOM05D005136 ORTHO05D006619 6.5e-38 161.4 100 84.0
BcaB08g37416 Brassica carinata HOM05D005136 ORTHO05D006619 1.4e-37 160.2 144 63.9
Zm00001eb284000 Zea mays HOM05D005136 ORTHO05D006619 7.1e-37 157.9 133 62.4
EL10Ac7g17776 Beta vulgaris HOM05D005136 ORTHO05D006619 4.3e-34 148.7 144 60.4
SHI23962 Sapria himalayana HOM05D005136 ORTHO05D006619 2.2e-33 146.4 133 64.7
Atru.chr5.2947 Acer truncatum HOM05D005136 ORTHO05D006619 3.8e-30 135.6 81 85.2
Pp3c10_12480 Physcomitrium patens HOM05D005136 ORTHO05D006619 1.1e-29 134.0 151 52.3
SMO174G0113 Selaginella moellendorffii HOM05D005136 ORTHO05D006619 2.7e-28 129.4 133 51.9
CDE02G3080 Ceratophyllum demersum HOM05D005136 ORTHO05D006619 1.3e-27 127.1 84 75.0
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 6.7e-27 124.8 102 66.7
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 6.7e-27 124.8 102 66.7
Mapoly0003s0019 Marchantia polymorpha HOM05D005136 ORTHO05D006619 1.5e-26 123.6 141 51.8
EL10Ac1g02225 Beta vulgaris HOM05D005136 ORTHO05D006619 1.0e-22 110.9 177 45.2
Medtr3g116310 Medicago truncatula HOM05D005136 ORTHO05D006619 2.9e-22 109.4 78 70.5
Lj4g0027023 Lotus japonicus HOM05D005136 ORTHO05D006619 4.2e-21 105.5 142 49.3
Psat4g095600 Pisum sativum HOM05D005136 ORTHO05D006619 4.7e-20 102.1 79 63.3
Oeu014337.1 Olea europaea HOM05D005136 ORTHO05D006619 1.8e-19 100.1 79 58.2
Sp2g23220 Schrenkiella parvula HOM05D005136 ORTHO05D006619 3.0e-19 99.4 88 62.5
AagrBONN_evm.TU.Sc2ySwM_369.532 Anthoceros agrestis HOM05D005136 ORTHO05D006619 2.0e-18 96.7 129 44.2
Hma1.2p1_0854F.1_g228935 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 2.6e-18 96.3 71 66.2
Hma1.2p1_2665F.1_g326510 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 2.6e-18 96.3 71 66.2
Sc09g0004030 Simmondsia chinensis HOM05D005136 ORTHO05D006619 9.7e-18 94.4 143 42.7
COL.COLO4_32440 Corchorus olitorius HOM05D005136 ORTHO05D006619 1.7e-17 93.6 69 62.3
Thecc.02G123800 Theobroma cacao HOM05D005136 ORTHO05D006619 4.8e-17 92.0 71 63.4
Gohir.A03G179400 Gossypium hirsutum HOM05D005136 ORTHO05D006619 2.4e-16 89.7 69 62.3
Gorai.005G228200 Gossypium raimondii HOM05D005136 ORTHO05D006619 3.1e-16 89.4 69 62.3
Gohir.D02G202857 Gossypium hirsutum HOM05D005136 ORTHO05D006619 4.1e-16 89.0 69 60.9
Nitab4.5_0002541g0070 Nicotiana tabacum HOM05D005136 ORTHO05D024799 2.5e-13 79.7 72 56.9
Nitab4.5_0012262g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 4.7e-12 75.5 72 52.8
ECA233G0803 Erigeron canadensis HOM05D005136 ORTHO05D006619 1.3e-09 67.4 119 43.7
CAN.G1435.13 Capsicum annuum HOM05D005136 ORTHO05D024799 2.2e-09 66.6 82 42.7
Os07g0229100 Oryza sativa ssp. japonica HOM05D011003 ORTHO05D012370 1.8e-08 63.5 133 33.8
Peaxi162Scf00316g00313 Petunia axillaris HOM05D005136 ORTHO05D006619 1.0e-06 57.8 51 60.8
Solyc09g082750.1 Solanum lycopersicum HOM05D005136 ORTHO05D024799 1.3e-06 57.4 72 38.9
HPP92_014777 Vanilla planifolia HOM05D005136 ORTHO05D006619 1.7e-06 57.0 72 40.3


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