Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p042736 Quercus lobata HOM05D000626 ORTHO05D003868 1.7e-70 269.2 137 100.0
QL11p042537 Quercus lobata HOM05D000626 ORTHO05D003868 1.1e-21 107.1 63 90.5
Haze_02415 Corylus avellana HOM05D000626 ORTHO05D003868 4.0e-19 98.6 63 82.5
CiPaw.05G061300 Carya illinoinensis HOM05D000626 ORTHO05D003868 1.4e-16 90.1 63 76.2
TAR628G0085 Trochodendron aralioides HOM05D000626 ORTHO05D003868 1.2e-15 87.0 63 66.7
Dinv26800 Davidia involucrata HOM05D000626 ORTHO05D003868 2.0e-15 86.3 84 58.3
GSVIVG01031917001 Vitis vinifera HOM05D000626 ORTHO05D003868 2.0e-15 86.3 63 68.3
Atru.chr3.513 Acer truncatum HOM05D000626 ORTHO05D003868 4.5e-15 85.1 63 66.7
Dinv39947 Davidia involucrata HOM05D000626 ORTHO05D003868 5.9e-15 84.7 59 69.5
Cc07_g09070 Coffea canephora HOM05D000626 ORTHO05D003868 1.0e-14 84.0 59 71.2
Lj4C195G12 Lonicera japonica HOM05D000626 ORTHO05D003868 1.0e-14 84.0 60 68.3
Cpa.g.sc158.17 Carica papaya HOM05D000626 ORTHO05D003868 1.3e-14 83.6 64 64.1
Sabra07G0026800 Salix brachista HOM05D000626 ORTHO05D003868 2.2e-14 82.8 86 54.7
MELO3C021946.2 Cucumis melo HOM05D000626 ORTHO05D003868 2.9e-14 82.4 63 66.7
CSS0006874 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 3.8e-14 82.0 59 69.5
CANSAT01G0918 Cannabis sativa HOM05D000626 ORTHO05D003868 3.8e-14 82.0 63 61.9
Manes.13G136200 Manihot esculenta HOM05D000626 ORTHO05D003868 3.8e-14 82.0 64 68.8
Ca_20850_v3 Cicer arietinum L. HOM05D000626 ORTHO05D003868 6.5e-14 81.3 59 67.8
HanXRQChr15g0487501 Helianthus annuus HOM05D000626 ORTHO05D003868 6.5e-14 81.3 65 66.2
CsaV3_2G014400 Cucumis sativus L. HOM05D000626 ORTHO05D003868 8.5e-14 80.9 63 65.1
PSO541G5997 Papaver somniferum HOM05D000626 ORTHO05D003868 8.5e-14 80.9 60 66.7
PSO675G2926 Papaver somniferum HOM05D000626 ORTHO05D003868 8.5e-14 80.9 60 66.7
Glyma.11G120300 Glycine max HOM05D000626 ORTHO05D003868 1.5e-13 80.1 64 70.3
Lalb_Chr03g0025801 Lupinus albus HOM05D000626 ORTHO05D003868 1.5e-13 80.1 66 66.7
GSVIVG01019024001 Vitis vinifera HOM05D000626 ORTHO05D003868 1.5e-13 80.1 63 65.1
Aqoxy5G01696 Aquilegia oxysepala HOM05D000626 ORTHO05D003868 1.9e-13 79.7 65 61.5
CSS0002315 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 1.9e-13 79.7 59 67.8
ClCG09G017810 Citrullus lanatus HOM05D000626 ORTHO05D003868 1.9e-13 79.7 63 65.1
ATR0733G160 Amborella trichopoda HOM05D000626 ORTHO05D003868 2.5e-13 79.3 63 60.3
DCAR_017221 Daucus carota HOM05D000626 ORTHO05D003868 2.5e-13 79.3 56 75.0
Glyma.12G045400 Glycine max HOM05D000626 ORTHO05D003868 2.5e-13 79.3 64 68.8
Oeu035116.1 Olea europaea HOM05D000626 ORTHO05D003868 2.5e-13 79.3 59 66.1
CDE01G0575 Ceratophyllum demersum HOM05D000626 ORTHO05D003868 3.2e-13 79.0 63 58.7
Lj3g0026150 Lotus japonicus HOM05D000626 ORTHO05D003868 3.2e-13 79.0 63 65.1
Medtr4g069240 Medicago truncatula HOM05D000626 ORTHO05D003868 3.2e-13 79.0 63 63.5
CSS0013243 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 4.2e-13 78.6 59 67.8
CSS0037823 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 4.2e-13 78.6 59 67.8
Manes.12G098300 Manihot esculenta HOM05D000626 ORTHO05D003868 4.2e-13 78.6 56 69.6
TAR376G0372 Trochodendron aralioides HOM05D000626 ORTHO05D003868 4.2e-13 78.6 63 61.9
Migut.H00194 Erythranthe guttata HOM05D000626 ORTHO05D003868 5.5e-13 78.2 67 61.2
TWI31G0747 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 5.5e-13 78.2 66 65.2
Actinidia36541 Actinidia chinensis HOM05D000626 ORTHO05D003868 7.2e-13 77.8 59 64.4
arahy.Tifrunner.gnm1.ann1.GNS53T Arachis hypogaea HOM05D000626 ORTHO05D003868 9.4e-13 77.4 63 65.1
arahy.Tifrunner.gnm1.ann1.NL7PFA Arachis hypogaea HOM05D000626 ORTHO05D003868 9.4e-13 77.4 63 65.1
Phvul.011G047300 Phaseolus vulgaris HOM05D000626 ORTHO05D003868 9.4e-13 77.4 64 68.8
Prupe.7G148700 Prunus persica HOM05D000626 ORTHO05D003868 9.4e-13 77.4 63 65.1
Sed0005165 Sechium edule HOM05D000626 ORTHO05D003868 9.4e-13 77.4 63 61.9
Nitab4.5_0008989g0040 Nicotiana tabacum HOM05D000626 ORTHO05D003868 1.2e-12 77.0 67 59.7
SalBow5G3169 Salvia bowleyana HOM05D000626 ORTHO05D003868 1.2e-12 77.0 58 63.8
VMungo1127G0953 Vigna mungo HOM05D000626 ORTHO05D003868 1.2e-12 77.0 64 68.8
Psat7g141000 Pisum sativum HOM05D000626 ORTHO05D003868 1.6e-12 76.6 59 66.1
Atru.chr5.2949 Acer truncatum HOM05D000626 ORTHO05D003868 2.1e-12 76.3 64 60.9
MD05G1070400 Malus domestica HOM05D000626 ORTHO05D003868 2.1e-12 76.3 65 64.6
MD10G1081300 Malus domestica HOM05D000626 ORTHO05D003868 2.1e-12 76.3 65 64.6
Nitab4.5_0001794g0020 Nicotiana tabacum HOM05D000626 ORTHO05D003868 2.1e-12 76.3 67 59.7
Peaxi162Scf00016g00944 Petunia axillaris HOM05D000626 ORTHO05D003868 2.7e-12 75.9 63 61.9
Prupe.8G102600 Prunus persica HOM05D000626 ORTHO05D003868 2.7e-12 75.9 64 65.6
Duzib052G0942 Durio zibethinus HOM05D000626 ORTHO05D003868 3.6e-12 75.5 65 64.6
FvH4_2g08200 Fragaria vesca HOM05D000626 ORTHO05D003868 3.6e-12 75.5 60 66.7
FAN24G1839 Fragaria x ananassa HOM05D000626 ORTHO05D003868 3.6e-12 75.5 60 66.7
Oeu032561.1 Olea europaea HOM05D000626 ORTHO05D003868 3.6e-12 75.5 56 67.9
THA.LOC104826869 Tarenaya hassleriana HOM05D000626 ORTHO05D003868 3.6e-12 75.5 65 63.1
Actinidia00502 Actinidia chinensis HOM05D000626 ORTHO05D003868 4.7e-12 75.1 71 56.3
Potri.007G031000 Populus trichocarpa HOM05D000626 ORTHO05D003868 4.7e-12 75.1 60 65.0
RcHm_v2.0_Chr6g0262991 Rosa chinensis HOM05D000626 ORTHO05D003868 4.7e-12 75.1 60 68.3
TPR.G28529 Trifolium pratense HOM05D000626 ORTHO05D003868 4.7e-12 75.1 64 65.6
Thhalv10004242m.g Eutrema salsugineum HOM05D000626 ORTHO05D003868 6.1e-12 74.7 51 72.5
Sed0006655 Sechium edule HOM05D000626 ORTHO05D003868 6.1e-12 74.7 63 60.3
THA.LOC104819216 Tarenaya hassleriana HOM05D000626 ORTHO05D003868 6.1e-12 74.7 51 74.5
AT5G66680 Arabidopsis thaliana HOM05D000626 ORTHO05D003868 8.0e-12 74.3 58 65.5
CSS0014885 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 8.0e-12 74.3 59 64.4
Carub.0008s2782 Capsella rubella HOM05D000626 ORTHO05D003868 8.0e-12 74.3 63 61.9
COL.COLO4_32455 Corchorus olitorius HOM05D000626 ORTHO05D003868 8.0e-12 74.3 65 64.6
ECA232G3839 Erigeron canadensis HOM05D000626 ORTHO05D003868 8.0e-12 74.3 63 63.5
Lalb_Chr01g0002691 Lupinus albus HOM05D000626 ORTHO05D003868 8.0e-12 74.3 65 64.6
SGA_v2.0_scaffold276G46656 Striga asiatica HOM05D000626 ORTHO05D003868 8.0e-12 74.3 59 62.7
vmacro02136 Vaccinium macrocarpon HOM05D000626 ORTHO05D003868 8.0e-12 74.3 65 66.2
AL8G44800 Arabidopsis lyrata HOM05D000626 ORTHO05D003868 1.0e-11 73.9 63 61.9
Cpa.g.sc62.112 Carica papaya HOM05D000626 ORTHO05D003868 1.0e-11 73.9 64 59.4
FAN15G2364 Fragaria x ananassa HOM05D000626 ORTHO05D003868 1.0e-11 73.9 60 66.7
FAN20G2380 Fragaria x ananassa HOM05D000626 ORTHO05D003868 1.0e-11 73.9 60 66.7
FAN27G0454 Fragaria x ananassa HOM05D000626 ORTHO05D003868 1.0e-11 73.9 60 66.7
Sopen01g051600 Solanum pennellii HOM05D000626 ORTHO05D003868 1.0e-11 73.9 63 60.3
Aa31LG1G15220 Aethionema arabicum HOM05D000626 ORTHO05D003868 1.4e-11 73.6 63 60.3
CARHR281040 Cardamine hirsuta HOM05D000626 ORTHO05D003868 1.4e-11 73.6 63 61.9
SalBow6G3366 Salvia bowleyana HOM05D000626 ORTHO05D003868 1.4e-11 73.6 60 61.7
MSTRG.23557 Avicennia marina HOM05D000626 ORTHO05D003868 1.8e-11 73.2 56 62.5
Lsat_1_v5_gn_4_144441 Lactuca sativa HOM05D000626 ORTHO05D003868 1.8e-11 73.2 58 65.5
TWI53G0930 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 1.8e-11 73.2 60 61.7
BcaB02g10001 Brassica carinata HOM05D000626 ORTHO05D003868 2.3e-11 72.8 63 60.3
MD15G1269000 Malus domestica HOM05D000626 ORTHO05D003868 2.3e-11 72.8 63 57.1
Thecc.01G041600 Theobroma cacao HOM05D000626 ORTHO05D003868 2.3e-11 72.8 58 62.1
Thecc.02G122300 Theobroma cacao HOM05D000626 ORTHO05D003868 2.3e-11 72.8 65 63.1
TWI09G1554 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 2.3e-11 72.8 65 60.0
A07p17280 Brassica napus HOM05D000626 ORTHO05D003868 3.0e-11 72.4 63 60.3
CAN.G322.113 Capsicum annuum HOM05D000626 ORTHO05D003868 3.0e-11 72.4 63 58.7
Ciclev10028484m.g Citrus clementina HOM05D000626 ORTHO05D003868 3.0e-11 72.4 64 57.8
Lj5C200G5 Lonicera japonica HOM05D000626 ORTHO05D003868 3.0e-11 72.4 57 64.9
Manes.15G148600 Manihot esculenta HOM05D000626 ORTHO05D003868 3.0e-11 72.4 61 60.7
Peaxi162Scf00684g00567 Petunia axillaris HOM05D000626 ORTHO05D003868 3.0e-11 72.4 60 61.7
Solyc01g109410.4 Solanum lycopersicum HOM05D000626 ORTHO05D003868 3.0e-11 72.4 63 58.7
BcaC04g23148 Brassica carinata HOM05D000626 ORTHO05D003868 4.0e-11 72.0 63 60.3
BcaC06g34731 Brassica carinata HOM05D000626 ORTHO05D003868 4.0e-11 72.0 63 60.3
A09p09850 Brassica napus HOM05D000626 ORTHO05D003868 4.0e-11 72.0 63 60.3
C07p25140 Brassica napus HOM05D000626 ORTHO05D003868 4.0e-11 72.0 63 60.3
C09p11660 Brassica napus HOM05D000626 ORTHO05D003868 4.0e-11 72.0 63 60.3
BolC7t43044H Brassica oleracea HOM05D000626 ORTHO05D003868 4.0e-11 72.0 63 60.3
BolC9t54060H Brassica oleracea HOM05D000626 ORTHO05D003868 4.0e-11 72.0 63 60.3
BraA07t29454Z Brassica rapa HOM05D000626 ORTHO05D003868 4.0e-11 72.0 63 60.3
Hma1.2p1_0066F.1_g036710 Hydrangea macrophylla HOM05D000626 ORTHO05D003868 4.0e-11 72.0 59 62.7
HPP92_010187 Vanilla planifolia HOM05D000626 ORTHO05D003868 4.0e-11 72.0 63 54.0
Potri.005G127000 Populus trichocarpa HOM05D000626 ORTHO05D003868 5.2e-11 71.6 53 67.9
Aqoxy6G01025 Aquilegia oxysepala HOM05D000626 ORTHO05D003868 6.8e-11 71.2 65 61.5
EL10Ac9g21756 Beta vulgaris HOM05D000626 ORTHO05D003868 6.8e-11 71.2 62 56.5
Gorai.013G052700 Gossypium raimondii HOM05D000626 ORTHO05D003868 8.8e-11 70.9 60 65.0
BraA09t36632Z Brassica rapa HOM05D000626 ORTHO05D003868 1.2e-10 70.5 63 58.7
BcaB04g20111 Brassica carinata HOM05D000626 ORTHO05D003868 1.5e-10 70.1 60 61.7
Gohir.D04G159100 Gossypium hirsutum HOM05D000626 ORTHO05D003868 1.5e-10 70.1 60 56.7
Gorai.012G146500 Gossypium raimondii HOM05D000626 ORTHO05D003868 1.5e-10 70.1 60 56.7
SGA_v2.0_scaffold33G13424 Striga asiatica HOM05D000626 ORTHO05D003868 1.5e-10 70.1 66 54.5
Duzib264G0072 Durio zibethinus HOM05D000626 ORTHO05D003868 2.0e-10 69.7 57 59.6
Nitab4.5_0000336g0150 Nicotiana tabacum HOM05D000626 ORTHO05D003868 2.0e-10 69.7 68 55.9
Ah.03g139660 Amaranthus hybridus HOM05D000626 ORTHO05D003868 2.6e-10 69.3 76 52.6
Gohir.A13G048600 Gossypium hirsutum HOM05D000626 ORTHO05D003868 2.6e-10 69.3 60 63.3
Gohir.D13G047000 Gossypium hirsutum HOM05D000626 ORTHO05D003868 2.6e-10 69.3 60 63.3
PGR042G1683 Punica granatum HOM05D000626 ORTHO05D003868 2.6e-10 69.3 59 57.6
AUR62003200 Chenopodium quinoa HOM05D000626 ORTHO05D003868 3.4e-10 68.9 63 54.0
AUR62008017 Chenopodium quinoa HOM05D000626 ORTHO05D003868 4.4e-10 68.6 63 54.0
Cc02_g17860 Coffea canephora HOM05D000626 ORTHO05D003868 4.4e-10 68.6 66 54.5
Duzib132G0298 Durio zibethinus HOM05D000626 ORTHO05D003868 4.4e-10 68.6 65 61.5
Ah.01g019620 Amaranthus hybridus HOM05D000626 ORTHO05D003868 5.7e-10 68.2 63 54.0
Sp2g30020 Schrenkiella parvula HOM05D000626 ORTHO05D003868 5.7e-10 68.2 60 60.0
MSTRG.16792 Avicennia marina HOM05D000626 ORTHO05D003868 7.5e-10 67.8 60 58.3
Gohir.A04G117400 Gossypium hirsutum HOM05D000626 ORTHO05D003868 9.8e-10 67.4 60 55.0
Potri.004G157900 Populus trichocarpa HOM05D000626 ORTHO05D003868 9.8e-10 67.4 59 57.6
SEGI_04451 Sequoiadendron giganteum HOM05D000626 ORTHO05D003868 9.8e-10 67.4 63 52.4
EL10Ac6g14893 Beta vulgaris HOM05D000626 ORTHO05D003868 1.7e-09 66.6 76 52.6
AUR62011357 Chenopodium quinoa HOM05D000626 ORTHO05D003868 1.7e-09 66.6 63 55.6
Eucgr.G01893 Eucalyptus grandis HOM05D000626 ORTHO05D003868 1.7e-09 66.6 60 56.7
AUR62016705 Chenopodium quinoa HOM05D000626 ORTHO05D003868 2.2e-09 66.2 63 55.6
COL.COLO4_22139 Corchorus olitorius HOM05D000626 ORTHO05D003868 2.2e-09 66.2 57 59.6
Mapoly0103s0006 Marchantia polymorpha HOM05D000626 ORTHO05D003868 2.2e-09 66.2 62 53.2
Hund06221 Selenicereus undatus HOM05D000626 ORTHO05D003868 3.7e-09 65.5 63 54.0
Hund14135 Selenicereus undatus HOM05D000626 ORTHO05D003868 3.7e-09 65.5 65 50.8
Lj2C447T14 Lonicera japonica HOM05D000626 ORTHO05D003868 4.8e-09 65.1 59 61.0
SGA_v2.0_scaffold58G20567 Striga asiatica HOM05D000626 ORTHO05D003868 6.3e-09 64.7 61 57.4
unitig_37.g12815 Utricularia gibba HOM05D000626 ORTHO05D003868 1.1e-08 63.9 57 57.9
Nn5g29507 Nelumbo nucifera HOM05D000626 ORTHO05D003868 1.4e-08 63.5 61 55.7
Pp3c24_6930 Physcomitrium patens HOM05D000626 ORTHO05D003868 4.1e-08 62.0 71 47.9
Duzib147G0490 Durio zibethinus HOM05D000626 ORTHO05D003868 2.7e-07 59.3 51 56.9
Zm00001eb303200 Zea mays HOM05D000626 ORTHO05D003868 4.5e-07 58.5 60 51.7
SMO358G0537 Selaginella moellendorffii HOM05D000626 ORTHO05D003868 2.3e-06 56.2 44 56.8
AagrBONN_evm.TU.Sc2ySwM_117.2383 Anthoceros agrestis HOM05D000626 ORTHO05D003868 3.8e-06 55.5 54 53.7
Sc18g0004660 Simmondsia chinensis HOM05D000626 ORTHO05D003868 3.8e-06 55.5 60 51.7


User provided reference genes

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