Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p040287 Quercus lobata HOM05D004816 ORTHO05D006043 7.3e-263 910.2 529 100.0
QL11p039002 Quercus lobata HOM05D004816 ORTHO05D006043 6.4e-259 897.1 529 97.7
Cfa004941 Carpinus fangiana HOM05D004816 ORTHO05D006043 7.7e-212 740.7 529 78.1
GSVIVG01031842001 Vitis vinifera HOM05D004816 ORTHO05D006043 1.1e-197 693.7 480 76.9
Haze_02469 Corylus avellana HOM05D004816 ORTHO05D006043 1.4e-197 693.3 615 68.5
CiPaw.06G139500 Carya illinoinensis HOM05D004816 ORTHO05D006043 1.8e-197 693.0 527 73.4
Dinv23600 Davidia involucrata HOM05D004816 ORTHO05D006043 1.5e-194 683.3 480 77.1
Atru.chr5.2842 Acer truncatum HOM05D004816 ORTHO05D006043 2.9e-187 659.1 473 75.5
Thecc.02G094000 Theobroma cacao HOM05D004816 ORTHO05D006043 1.2e-185 653.7 479 76.2
CSS0036891 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 6.1e-185 651.4 481 73.4
Duzib248G0025 Durio zibethinus HOM05D004816 ORTHO05D006043 4.0e-184 648.7 473 73.6
MD10G1088000 Malus domestica HOM05D004816 ORTHO05D006043 8.8e-184 647.5 531 70.4
Potri.009G107800 Populus trichocarpa HOM05D004816 ORTHO05D006043 1.2e-183 647.1 469 77.0
COL.COLO4_11733 Corchorus olitorius HOM05D004816 ORTHO05D006043 5.7e-183 644.8 471 76.4
Duzib132G0866 Durio zibethinus HOM05D004816 ORTHO05D006043 2.4e-181 639.4 474 75.7
CANSAT25G1860 Cannabis sativa HOM05D004816 ORTHO05D006043 1.1e-178 630.6 531 69.7
Manes.17G095600 Manihot esculenta HOM05D004816 ORTHO05D006043 1.9e-178 629.8 478 73.6
Actinidia17843 Actinidia chinensis HOM05D004816 ORTHO05D006043 2.8e-177 625.9 470 71.7
Ca_12466_v3 Cicer arietinum L. HOM05D004816 ORTHO05D006043 2.8e-177 625.9 480 70.4
TAR625G0829 Trochodendron aralioides HOM05D004816 ORTHO05D006043 2.8e-177 625.9 484 70.7
Gohir.A12G026800 Gossypium hirsutum HOM05D004816 ORTHO05D006043 3.0e-176 622.5 460 75.4
Gohir.D12G026300 Gossypium hirsutum HOM05D004816 ORTHO05D006043 3.0e-176 622.5 473 74.6
Gorai.008G026600 Gossypium raimondii HOM05D004816 ORTHO05D006043 5.2e-176 621.7 473 74.6
Sabra09G0082300 Salix brachista HOM05D004816 ORTHO05D006043 6.8e-176 621.3 480 72.1
Rhsim05G0079600 Rhododendron simsii HOM05D004816 ORTHO05D006043 1.3e-174 617.1 504 70.4
Lalb_Chr10g0095411 Lupinus albus HOM05D004816 ORTHO05D006043 8.3e-174 614.4 480 68.8
Medtr1g034170 Medicago truncatula HOM05D004816 ORTHO05D006043 1.4e-173 613.6 500 67.0
Nn6g32127 Nelumbo nucifera HOM05D004816 ORTHO05D006043 7.0e-173 611.3 481 68.8
Lj5A205G67 Lonicera japonica HOM05D004816 ORTHO05D006043 1.5e-170 603.6 494 69.8
MD05G1073700 Malus domestica HOM05D004816 ORTHO05D006043 1.5e-170 603.6 531 65.7
Eucgr.I01207 Eucalyptus grandis HOM05D004816 ORTHO05D006043 2.5e-170 602.8 474 70.9
TWI31G1354 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 2.5e-170 602.8 488 70.3
Glyma.20G009200 Glycine max HOM05D004816 ORTHO05D006043 2.1e-169 599.7 480 66.7
Ciclev10028431m.g Citrus clementina HOM05D004816 ORTHO05D006043 6.1e-169 598.2 455 74.5
PSO675G8525 Papaver somniferum HOM05D004816 ORTHO05D006043 1.0e-168 597.4 481 69.6
Actinidia27933 Actinidia chinensis HOM05D004816 ORTHO05D006043 1.4e-168 597.0 412 75.2
MBI16_g31473_MAGBIO Magnolia biondii HOM05D004816 ORTHO05D006043 1.8e-168 596.7 493 67.3
FvH4_2g07090 Fragaria vesca HOM05D004816 ORTHO05D006043 5.2e-168 595.1 413 75.8
QL06p000730 Quercus lobata HOM05D004816 ORTHO05D006043 2.6e-167 592.8 400 86.8
PGSC0003DMG402025925 Solanum tuberosum HOM05D004816 ORTHO05D006043 9.8e-167 590.9 472 67.4
Sopen01g051090 Solanum pennellii HOM05D004816 ORTHO05D006043 1.7e-166 590.1 475 67.2
MELO3C018421.2 Cucumis melo HOM05D004816 ORTHO05D006043 3.7e-166 589.0 468 68.4
ClCG02G005580 Citrullus lanatus HOM05D004816 ORTHO05D006043 4.9e-166 588.6 470 71.7
Aqoxy6G00919 Aquilegia oxysepala HOM05D004816 ORTHO05D006043 8.3e-166 587.8 477 66.5
PSO541G0848 Papaver somniferum HOM05D004816 ORTHO05D006043 8.3e-166 587.8 481 69.4
Solyc01g108890.3 Solanum lycopersicum HOM05D004816 ORTHO05D006043 1.8e-165 586.6 475 66.5
vmacro19471 Vaccinium macrocarpon HOM05D004816 ORTHO05D006043 2.4e-165 586.3 487 69.8
Phvul.003G011700 Phaseolus vulgaris HOM05D004816 ORTHO05D006043 9.2e-165 584.3 481 64.2
TPR.G18619 Trifolium pratense HOM05D004816 ORTHO05D006043 3.5e-164 582.4 463 67.6
Psat6g096400 Pisum sativum HOM05D004816 ORTHO05D006043 6.6e-163 578.2 476 66.8
arahy.Tifrunner.gnm1.ann1.D5RGK8 Arachis hypogaea HOM05D004816 ORTHO05D006043 1.5e-162 577.0 507 63.9
CsaV3_7G010070 Cucumis sativus L. HOM05D004816 ORTHO05D006043 1.5e-162 577.0 470 67.4
arahy.Tifrunner.gnm1.ann1.WD2X18 Arachis hypogaea HOM05D004816 ORTHO05D006043 2.8e-161 572.8 507 63.7
Nitab4.5_0009440g0020 Nicotiana tabacum HOM05D004816 ORTHO05D006043 3.6e-161 572.4 506 64.0
Sed0008645 Sechium edule HOM05D004816 ORTHO05D006043 3.1e-160 569.3 468 66.0
PGSC0003DMG400006219 Solanum tuberosum HOM05D004816 ORTHO05D006043 5.2e-160 568.5 481 62.6
MSTRG.20129 Avicennia marina HOM05D004816 ORTHO05D006043 5.8e-159 565.1 479 65.3
Peaxi162Scf00003g02043 Petunia axillaris HOM05D004816 ORTHO05D006043 9.8e-159 564.3 481 64.7
Nitab4.5_0013034g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 8.3e-158 561.2 469 67.0
Nitab4.5_0001401g0100 Nicotiana tabacum HOM05D004816 ORTHO05D006043 1.4e-157 560.5 412 71.8
Haze_02467 Corylus avellana HOM05D004816 ORTHO05D006043 2.4e-157 559.7 422 72.0
FAN15G1865 Fragaria x ananassa HOM05D004816 ORTHO05D006043 4.1e-157 558.9 411 72.5
FAN27G2465 Fragaria x ananassa HOM05D004816 ORTHO05D006043 1.3e-155 553.9 411 71.8
Glyma.07G180000 Glycine max HOM05D004816 ORTHO05D006043 1.3e-155 553.9 480 66.2
Migut.B00299 Erythranthe guttata HOM05D004816 ORTHO05D006043 2.3e-155 553.1 479 67.2
PGR142G0866 Punica granatum HOM05D004816 ORTHO05D006043 3.9e-155 552.4 414 69.1
AL3G47650 Arabidopsis lyrata HOM05D004816 ORTHO05D006043 8.6e-155 551.2 531 60.6
Sp3g29160 Schrenkiella parvula HOM05D004816 ORTHO05D006043 1.9e-154 550.1 501 60.9
BcaC01g03051 Brassica carinata HOM05D004816 ORTHO05D006043 9.5e-154 547.7 533 58.7
C03p56660 Brassica napus HOM05D004816 ORTHO05D006043 9.5e-154 547.7 533 58.7
AT2G15860 Arabidopsis thaliana HOM05D004816 ORTHO05D006043 3.6e-153 545.8 501 62.9
SGA_v2.0_scaffold58G20600 Striga asiatica HOM05D004816 ORTHO05D006043 1.2e-151 540.8 479 63.7
THA.LOC104807346 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 1.5e-151 540.4 480 66.7
Aa31LG8G13390 Aethionema arabicum HOM05D004816 ORTHO05D006043 2.0e-151 540.0 530 58.3
Carub.0003s2975 Capsella rubella HOM05D004816 ORTHO05D006043 1.7e-150 537.0 481 63.8
BcaB08g34612 Brassica carinata HOM05D004816 ORTHO05D006043 2.9e-150 536.2 480 64.0
THA.LOC104819592 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 2.9e-150 536.2 473 63.8
BolC3t17950H Brassica oleracea HOM05D004816 ORTHO05D006043 3.7e-150 535.8 553 56.6
A03p45610 Brassica napus HOM05D004816 ORTHO05D006043 6.4e-150 535.0 512 61.3
HanXRQChr10g0303411 Helianthus annuus HOM05D004816 ORTHO05D006043 8.3e-150 534.6 500 65.0
SalBow6G5269 Salvia bowleyana HOM05D004816 ORTHO05D006043 1.1e-149 534.3 480 64.2
BcaC06g36093 Brassica carinata HOM05D004816 ORTHO05D006043 2.4e-149 533.1 479 61.6
BcaB03g16336 Brassica carinata HOM05D004816 ORTHO05D006043 3.2e-149 532.7 481 62.0
VMungo1215G1045 Vigna mungo HOM05D004816 ORTHO05D006043 3.2e-149 532.7 533 59.5
DCAR_022069 Daucus carota HOM05D004816 ORTHO05D006043 4.1e-149 532.3 452 65.5
BraA03t13693Z Brassica rapa HOM05D004816 ORTHO05D006043 5.4e-149 531.9 516 60.7
Cc02_g18320 Coffea canephora HOM05D004816 ORTHO05D006043 9.2e-149 531.2 393 71.0
CARHR106200 Cardamine hirsuta HOM05D004816 ORTHO05D006043 2.1e-148 530.0 502 63.1
BraA07t28285Z Brassica rapa HOM05D004816 ORTHO05D006043 7.8e-148 528.1 496 60.5
Thhalv10022638m.g Eutrema salsugineum HOM05D004816 ORTHO05D006043 7.8e-148 528.1 528 60.4
C07p07890 Brassica napus HOM05D004816 ORTHO05D006043 6.6e-147 525.0 489 60.3
BolC7t41207H Brassica oleracea HOM05D004816 ORTHO05D006043 6.6e-147 525.0 489 60.3
AUR62011413 Chenopodium quinoa HOM05D004816 ORTHO05D006043 1.2e-145 520.8 475 61.1
ATR0733G051 Amborella trichopoda HOM05D004816 ORTHO05D006043 1.6e-145 520.4 409 66.0
AUR62016646 Chenopodium quinoa HOM05D004816 ORTHO05D006043 2.8e-145 519.6 475 61.3
MSTRG.16772 Avicennia marina HOM05D004816 ORTHO05D006043 8.1e-145 518.1 472 61.7
CAN.G322.72 Capsicum annuum HOM05D004816 ORTHO05D006043 1.7e-142 510.4 390 69.5
FAN24G2332 Fragaria x ananassa HOM05D004816 ORTHO05D006043 2.4e-141 506.5 402 68.9
ECA234G4099 Erigeron canadensis HOM05D004816 ORTHO05D006043 4.6e-140 502.3 405 65.7
Prupe.8G114000 Prunus persica HOM05D004816 ORTHO05D006043 3.0e-139 499.6 474 64.8
Hund06195 Selenicereus undatus HOM05D004816 ORTHO05D006043 5.1e-139 498.8 412 65.5
EL10Ac9g21805 Beta vulgaris HOM05D004816 ORTHO05D006043 3.3e-138 496.1 498 59.6
Lsat_1_v5_gn_5_117600 Lactuca sativa HOM05D004816 ORTHO05D006043 2.4e-136 490.0 389 66.1
HPP92_019907 Vanilla planifolia HOM05D004816 ORTHO05D006043 9.9e-135 484.6 474 57.0
Os03g0737900 Oryza sativa ssp. japonica HOM05D004816 ORTHO05D006043 9.3e-133 478.0 476 57.8
Zm00001eb056520 Zea mays HOM05D004816 ORTHO05D006043 8.7e-131 471.5 408 61.0
TAR381G0713 Trochodendron aralioides HOM05D004816 ORTHO05D006043 1.9e-130 470.3 358 71.2
A07p04930 Brassica napus HOM05D004816 ORTHO05D006043 2.5e-130 469.9 392 64.3
Lj2g0017153 Lotus japonicus HOM05D004816 ORTHO05D001172 4.3e-130 469.2 363 70.0
QL08p015136 Quercus lobata HOM05D004816 ORTHO05D000106 1.8e-128 463.8 276 90.9
QL08p015067 Quercus lobata HOM05D004816 ORTHO05D000106 5.3e-128 462.2 276 90.6
Cpa.g.sc62.70 Carica papaya HOM05D004816 ORTHO05D006043 1.6e-121 440.7 354 70.1
CDE06G1012 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 3.4e-119 433.0 381 60.6
unitig_21.g20758 Utricularia gibba HOM05D004816 ORTHO05D006043 3.0e-107 393.3 509 48.3
Mapoly0087s0083 Marchantia polymorpha HOM05D004816 ORTHO05D006043 1.1e-106 391.3 510 46.7
CDE04G3783 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 3.8e-102 376.3 315 61.9
Pp3c4_2830 Physcomitrium patens HOM05D004816 ORTHO05D006043 1.5e-95 354.4 497 42.7
RcHm_v2.0_Chr6g0259581 Rosa chinensis HOM05D004816 ORTHO05D006043 3.8e-94 349.7 269 74.7
SEGI_09196 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 3.6e-92 343.2 287 61.3
SMO347G0163 Selaginella moellendorffii HOM05D004816 ORTHO05D006043 1.4e-91 341.3 475 42.5
Nitab4.5_0005466g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 3.7e-89 333.2 318 59.7
Sc08g0000210 Simmondsia chinensis HOM05D004816 ORTHO05D006043 1.9e-85 320.9 231 71.0
CSS0007305 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 3.6e-84 316.6 343 58.9
AagrBONN_evm.TU.Sc2ySwM_228.2260 Anthoceros agrestis HOM05D004816 ORTHO05D006043 1.3e-81 308.1 496 39.9
SHI18146 Sapria himalayana HOM05D004816 ORTHO05D006043 3.5e-79 300.1 606 38.0
Oeu021929.4 Olea europaea HOM05D004816 ORTHO05D006043 1.5e-77 294.7 301 55.5
CSS0019035 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 9.4e-69 265.4 307 56.4
Dinv42115 Davidia involucrata HOM05D004816 ORTHO05D000337 4.7e-68 263.1 474 42.4
RcHm_v2.0_Chr6g0259571 Rosa chinensis HOM05D004816 ORTHO05D006043 6.8e-67 259.2 176 76.7
Manes.15G144501 Manihot esculenta HOM05D004816 ORTHO05D006043 4.5e-55 219.9 184 75.0
Sc08g0000220 Simmondsia chinensis HOM05D004816 ORTHO05D006043 4.9e-49 199.9 157 67.5
Cpa.g.sc62.69 Carica papaya HOM05D004816 ORTHO05D006043 1.1e-48 198.7 144 74.3
Nitab4.5_0000876g0230 Nicotiana tabacum HOM05D000224 ORTHO05D000337 1.0e-46 192.2 159 66.7
TWI79G0508 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 1.9e-37 161.4 106 79.2
Lsat_1_v5_gn_4_68061 Lactuca sativa HOM05D004816 ORTHO05D006043 1.7e-33 148.3 179 57.0
Atru.chr13.510 Acer truncatum HOM05D004816 ORTHO05D006043 2.7e-31 141.0 104 73.1
Atru.chr8.2607 Acer truncatum HOM05D004816 ORTHO05D006043 2.7e-31 141.0 104 73.1
Oeu057669.2 Olea europaea HOM05D004816 ORTHO05D006043 1.0e-30 139.0 176 60.8
Gohir.A01G005566 Gossypium hirsutum HOM05D004816 ORTHO05D006043 8.6e-30 136.0 126 58.7
Lsat_1_v5_gn_4_111080 Lactuca sativa HOM05D004816 ORTHO05D006043 2.8e-20 104.4 197 44.7
SEGI_20581 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 2.8e-20 104.4 127 52.0
Duzib052G0890 Durio zibethinus HOM05D004816 ORTHO05D006043 3.4e-18 97.4 69 73.9
Psat0s2233g0240 Pisum sativum HOM05D004816 ORTHO05D006043 4.4e-18 97.1 107 51.4
Atru.chr8.2606 Acer truncatum HOM05D004816 ORTHO05D006043 3.8e-17 94.0 57 80.7
DCAR_015855 Daucus carota HOM05D004816 ORTHO05D006043 4.9e-17 93.6 104 55.8
CSS0032400 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 4.2e-16 90.5 168 42.3
Actinidia00469 Actinidia chinensis HOM05D004816 ORTHO05D006043 7.8e-15 86.3 74 62.2
arahy.Tifrunner.gnm1.ann1.MV8GC5 Arachis hypogaea HOM05D004816 ORTHO05D006043 3.0e-14 84.3 125 40.0
Sopen01g051070 Solanum pennellii HOM05D004816 ORTHO05D006043 8.7e-14 82.8 82 56.1
CSS0045496 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 5.3e-11 73.6 159 39.0
CSS0009254 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 6.9e-11 73.2 162 37.7
arahy.Tifrunner.gnm1.ann1.JF64TB Arachis hypogaea HOM05D004816 ORTHO05D006043 1.5e-10 72.0 110 45.5
Sabra01G0122300 Salix brachista HOM05D000001 ORTHO05D004986 4.9e-09 67.0 98 46.9
CSS0049387 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 6.4e-09 66.6 159 37.7
CSS0012251 Camellia sinensis var. sinensis HOM05D000224 ORTHO05D006043 5.4e-08 63.5 134 39.6
Cre06.g302850 Chlamydomonas reinhardtii HOM05D004816 ORTHO05D006043 1.2e-07 62.4 225 27.6


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