Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p039275 Quercus lobata HOM05D008520 ORTHO05D009890 1.7e-29 132.1 70 100.0
Cfa004952 Carpinus fangiana HOM05D008520 ORTHO05D009890 1.3e-13 79.3 75 66.7
Haze_02458 Corylus avellana HOM05D008520 ORTHO05D009890 1.8e-12 75.5 76 61.8
Haze_02459 Corylus avellana HOM05D008520 ORTHO05D009890 2.9e-10 68.2 73 60.3
Atru.chr5.2897 Acer truncatum HOM05D008520 ORTHO05D009890 8.5e-10 66.6 74 54.1
Cfa004950 Carpinus fangiana HOM05D008520 ORTHO05D009890 3.2e-09 64.7 75 61.3
Potri.009G109300 Populus trichocarpa HOM05D008520 ORTHO05D009890 5.5e-09 63.9 70 50.0
Potri.004G148200 Populus trichocarpa HOM05D008520 ORTHO05D009890 1.2e-08 62.8 69 55.1
Phvul.011G050000 Phaseolus vulgaris HOM05D008520 ORTHO05D009890 2.1e-08 62.0 74 50.0
Manes.15G145900 Manihot esculenta HOM05D008520 ORTHO05D009890 3.6e-08 61.2 73 52.1
Thecc.02G029000 Theobroma cacao HOM05D008520 ORTHO05D009890 3.6e-08 61.2 72 50.0
Ciclev10029756m.g Citrus clementina HOM05D008520 ORTHO05D009890 4.7e-08 60.8 70 52.9
Atru.chr5.2895 Acer truncatum HOM05D008520 ORTHO05D009890 6.1e-08 60.5 74 47.3
Ca_12478_v3 Cicer arietinum L. HOM05D008520 ORTHO05D009890 6.1e-08 60.5 73 57.5
Medtr4g068560 Medicago truncatula HOM05D008520 ORTHO05D009890 1.4e-07 59.3 74 43.2
Glyma.07G163300 Glycine max HOM05D008520 ORTHO05D009890 2.3e-07 58.5 76 51.3
Medtr1g034290 Medicago truncatula HOM05D008520 ORTHO05D009890 2.3e-07 58.5 73 57.5
Glyma.11G123300 Glycine max HOM05D008520 ORTHO05D009890 3.0e-07 58.2 74 47.3
Manes.17G096900 Manihot esculenta HOM05D012043 ORTHO05D009890 3.0e-07 58.2 73 52.1
CiPaw.06G139100 Carya illinoinensis HOM05D012043 ORTHO05D009890 4.0e-07 57.8 75 50.7
COL.COLO4_17779 Corchorus olitorius HOM05D008520 ORTHO05D009890 4.0e-07 57.8 75 48.0
Lj2g0022497 Lotus japonicus HOM05D008520 ORTHO05D009890 5.2e-07 57.4 69 50.7
Ciclev10029754m.g Citrus clementina HOM05D008520 ORTHO05D009890 8.8e-07 56.6 69 52.2
Lj3g0002198 Lotus japonicus HOM05D008520 ORTHO05D009890 1.5e-06 55.8 77 48.1
Glyma.20G008300 Glycine max HOM05D008520 ORTHO05D009890 2.0e-06 55.5 71 53.5
Prupe.8G111600 Prunus persica HOM05D008520 ORTHO05D009890 2.6e-06 55.1 83 45.8
Prupe.8G112200 Prunus persica HOM05D008520 ORTHO05D009890 2.6e-06 55.1 83 45.8
Eucgr.G00506 Eucalyptus grandis HOM05D012043 ORTHO05D009890 9.7e-06 53.1 77 44.2


User provided reference genes

Program Settings