Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p037484 Quercus lobata HOM05D008254 ORTHO05D010423 1.8e-125 452.6 223 100.0
CiPaw.05G054200 Carya illinoinensis HOM05D008254 ORTHO05D010423 4.8e-91 338.2 225 75.6
Cfa005450 Carpinus fangiana HOM05D008254 ORTHO05D010423 3.4e-84 315.5 230 72.2
Haze_01907 Corylus avellana HOM05D008254 ORTHO05D010423 3.1e-82 308.9 255 65.5
GSVIVG01031792001 Vitis vinifera HOM05D008254 ORTHO05D010423 1.4e-74 283.5 223 64.1
Potri.009G105900 Populus trichocarpa HOM05D008254 ORTHO05D010423 1.3e-72 276.9 226 62.4
TWI31G0737 Tripterygium wilfordii HOM05D008254 ORTHO05D010423 8.0e-70 267.7 223 61.9
Duzib132G0754 Durio zibethinus HOM05D008254 ORTHO05D010423 1.0e-69 267.3 219 61.2
Sabra09G0080900 Salix brachista HOM05D008254 ORTHO05D010423 3.0e-69 265.8 226 60.6
Thecc.02G097100 Theobroma cacao HOM05D008254 ORTHO05D010423 4.4e-68 261.9 222 60.4
Actinidia00462 Actinidia chinensis HOM05D008254 ORTHO05D010423 1.3e-67 260.4 226 60.2
CSS0044006 Camellia sinensis var. sinensis HOM05D008254 ORTHO05D010423 1.3e-64 250.4 226 60.2
vmacro02178 Vaccinium macrocarpon HOM05D008254 ORTHO05D010423 2.3e-64 249.6 223 58.7
COL.COLO4_32691 Corchorus olitorius HOM05D008254 ORTHO05D010423 7.3e-63 244.6 210 59.0
Gorai.005G240300 Gossypium raimondii HOM05D008254 ORTHO05D010423 1.6e-62 243.4 227 59.0
Gohir.D02G212300 Gossypium hirsutum HOM05D008254 ORTHO05D010423 2.1e-62 243.0 227 59.0
PGSC0003DMG400008243 Solanum tuberosum HOM05D008254 ORTHO05D010423 2.8e-62 242.7 221 56.6
Oeu009760.1 Olea europaea HOM05D008254 ORTHO05D010423 4.7e-62 241.9 222 57.7
PGR042G1247 Punica granatum HOM05D008254 ORTHO05D010423 5.2e-61 238.4 225 57.3
Cpa.g.sc62.40 Carica papaya HOM05D008254 ORTHO05D010423 8.9e-61 237.7 214 60.7
Cc02_g18530 Coffea canephora HOM05D008254 ORTHO05D010423 2.6e-60 236.1 226 53.1
Sopen10g022350 Solanum pennellii HOM05D008254 ORTHO05D010423 1.7e-59 233.4 222 54.1
Hund06184 Selenicereus undatus HOM05D008254 ORTHO05D010423 6.4e-59 231.5 226 55.8
Solyc10g150128.1 Solanum lycopersicum HOM05D008254 ORTHO05D010423 6.4e-59 231.5 222 55.0
Nitab4.5_0002673g0060 Nicotiana tabacum HOM05D008254 ORTHO05D010423 7.0e-58 228.0 222 52.3
Lsat_1_v5_gn_9_110380 Lactuca sativa HOM05D008254 ORTHO05D010423 1.2e-57 227.3 230 53.0
PSO017G7184 Papaver somniferum HOM05D008254 ORTHO05D010423 6.6e-56 221.5 246 50.0
PSO170G6160 Papaver somniferum HOM05D008254 ORTHO05D010423 2.5e-55 219.5 246 49.6
HanXRQChr02g0034931 Helianthus annuus HOM05D008254 ORTHO05D010423 9.5e-55 217.6 230 51.7
HanXRQChr02g0034971 Helianthus annuus HOM05D008254 ORTHO05D010423 9.5e-55 217.6 230 51.7
SalBow6G2473 Salvia bowleyana HOM05D008254 ORTHO05D010423 4.7e-54 215.3 226 52.2
MSTRG.20136 Avicennia marina HOM05D008254 ORTHO05D010423 6.2e-54 214.9 224 51.8
Os08g0477600 Oryza sativa ssp. japonica HOM05D008254 ORTHO05D010423 1.8e-53 213.4 251 49.0
Rhsim11G0168800 Rhododendron simsii HOM05D000144 ORTHO05D003364 4.0e-53 212.2 223 53.4
Aqoxy5G01299 Aquilegia oxysepala HOM05D008254 ORTHO05D010423 5.2e-53 211.8 266 45.5
Nitab4.5_0000876g0150 Nicotiana tabacum HOM05D008254 ORTHO05D010423 9.8e-52 207.6 207 52.7
Migut.B00312 Erythranthe guttata HOM05D008254 ORTHO05D010423 1.7e-51 206.8 226 48.7
ECA240G0616 Erigeron canadensis HOM05D008254 ORTHO05D010423 1.4e-50 203.8 228 49.1
Eucgr.G01497 Eucalyptus grandis HOM05D008254 ORTHO05D010423 2.1e-49 199.9 224 49.6
Oeu009762.1 Olea europaea HOM05D008254 ORTHO05D010423 1.0e-48 197.6 226 50.4
Lj9A360G67 Lonicera japonica HOM05D008254 ORTHO05D010423 5.1e-48 195.3 223 51.1
MBI06_g07359_MAGBIO Magnolia biondii HOM05D008254 ORTHO05D010423 6.2e-46 188.3 209 49.8
SGA_v2.0_scaffold32G13109 Striga asiatica HOM05D008254 ORTHO05D010423 1.1e-45 187.6 260 45.0
CANSAT25G2647 Cannabis sativa HOM05D008254 ORTHO05D010423 4.0e-45 185.7 249 44.6
HPP92_002305 Vanilla planifolia HOM05D008254 ORTHO05D010423 1.2e-41 174.1 220 45.9
QL11p037441 Quercus lobata HOM05D008254 ORTHO05D010423 6.0e-41 171.8 107 81.3
Manes.15G142800 Manihot esculenta HOM05D008254 ORTHO05D010423 1.5e-39 167.2 166 53.6
Zm00001eb038300 Zea mays HOM05D008254 ORTHO05D010423 1.4e-37 160.6 235 42.6
Eucgr.B00910 Eucalyptus grandis HOM05D008254 ORTHO05D010423 3.1e-37 159.5 143 58.7
Nn1g05870 Nelumbo nucifera HOM05D008254 ORTHO05D010423 2.9e-35 152.9 185 47.6
Gohir.A03G191400 Gossypium hirsutum HOM05D008254 ORTHO05D010423 7.1e-34 148.3 165 51.5
DCAR_003621 Daucus carota HOM05D008254 ORTHO05D010423 6.2e-30 135.2 164 45.7
QL05p004958 Quercus lobata HOM05D008254 ORTHO05D010423 1.4e-29 134.0 92 75.0
HanXRQChr02g0034911 Helianthus annuus HOM05D008254 ORTHO05D010423 3.1e-29 132.9 201 40.8
Pp3c8_11550 Physcomitrium patens HOM05D008254 ORTHO05D010423 2.0e-28 130.2 252 35.3
HanXRQChr03g0080261 Helianthus annuus HOM05D008254 ORTHO05D010423 3.4e-28 129.4 171 45.6
HanXRQChr08g0217421 Helianthus annuus HOM05D008254 ORTHO05D010423 3.4e-28 129.4 171 45.6
HanXRQChr12g0367771 Helianthus annuus HOM05D008254 ORTHO05D010423 3.4e-28 129.4 162 49.4
Hma1.2p1_3161F.1_g333460 Hydrangea macrophylla HOM05D008254 ORTHO05D010423 1.7e-27 127.1 147 50.3
Dinv23586 Davidia involucrata HOM05D008254 ORTHO05D010423 1.3e-24 117.5 160 46.2
SGA_v2.0_scaffold32G13097 Striga asiatica HOM05D008254 ORTHO05D010423 3.9e-24 115.9 220 36.4
HanXRQChr08g0217441 Helianthus annuus HOM05D008254 ORTHO05D010423 6.9e-21 105.1 75 64.0
Nn3g20147 Nelumbo nucifera HOM05D008254 ORTHO05D010423 1.1e-18 97.8 74 67.6
Oeu037642.1 Olea europaea HOM05D008254 ORTHO05D010423 3.2e-10 69.7 64 53.1


User provided reference genes

Program Settings