Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p037441 Quercus lobata HOM05D008254 ORTHO05D010423 2.1e-76 288.9 140 100.0
QL11p037484 Quercus lobata HOM05D008254 ORTHO05D010423 1.7e-41 172.9 107 81.3
CiPaw.05G054200 Carya illinoinensis HOM05D008254 ORTHO05D010423 7.6e-34 147.5 108 68.5
Haze_01907 Corylus avellana HOM05D008254 ORTHO05D010423 7.9e-31 137.5 95 70.5
Cfa005450 Carpinus fangiana HOM05D008254 ORTHO05D010423 5.1e-30 134.8 96 70.8
QL05p004958 Quercus lobata HOM05D008254 ORTHO05D010423 1.1e-27 127.1 85 75.3
Potri.009G105900 Populus trichocarpa HOM05D008254 ORTHO05D010423 2.2e-25 119.4 109 55.0
Sabra09G0080900 Salix brachista HOM05D008254 ORTHO05D010423 2.2e-25 119.4 93 62.4
Actinidia00462 Actinidia chinensis HOM05D008254 ORTHO05D010423 2.9e-25 119.0 116 53.4
GSVIVG01031792001 Vitis vinifera HOM05D008254 ORTHO05D010423 2.7e-23 112.5 106 51.9
Manes.15G142800 Manihot esculenta HOM05D008254 ORTHO05D010423 1.0e-22 110.5 139 41.0
TWI31G0737 Tripterygium wilfordii HOM05D008254 ORTHO05D010423 1.1e-21 107.1 113 46.9
Thecc.02G097100 Theobroma cacao HOM05D008254 ORTHO05D010423 9.6e-21 104.0 129 45.7
CSS0044006 Camellia sinensis var. sinensis HOM05D008254 ORTHO05D010423 5.3e-19 98.2 122 48.4
Rhsim11G0168800 Rhododendron simsii HOM05D000144 ORTHO05D003364 5.3e-19 98.2 108 47.2
Eucgr.G01497 Eucalyptus grandis HOM05D008254 ORTHO05D010423 1.5e-18 96.7 107 44.9
MSTRG.20136 Avicennia marina HOM05D008254 ORTHO05D010423 5.8e-18 94.7 65 69.2
vmacro02178 Vaccinium macrocarpon HOM05D008254 ORTHO05D010423 5.8e-18 94.7 108 49.1
Duzib132G0754 Durio zibethinus HOM05D008254 ORTHO05D010423 1.0e-17 94.0 96 51.0
Gorai.005G240300 Gossypium raimondii HOM05D008254 ORTHO05D010423 1.0e-17 94.0 119 42.9
Gohir.D02G212300 Gossypium hirsutum HOM05D008254 ORTHO05D010423 4.9e-17 91.7 119 42.9
Hund06184 Selenicereus undatus HOM05D008254 ORTHO05D010423 6.5e-17 91.3 67 62.7
Cpa.g.sc62.40 Carica papaya HOM05D008254 ORTHO05D010423 1.1e-16 90.5 97 49.5
Lj9A360G67 Lonicera japonica HOM05D008254 ORTHO05D010423 1.1e-16 90.5 110 47.3
Dinv23586 Davidia involucrata HOM05D008254 ORTHO05D010423 1.4e-16 90.1 120 44.2
Os08g0477600 Oryza sativa ssp. japonica HOM05D008254 ORTHO05D010423 1.9e-16 89.7 53 69.8
Gohir.A03G191400 Gossypium hirsutum HOM05D008254 ORTHO05D010423 4.2e-16 88.6 119 41.2
Lsat_1_v5_gn_9_110380 Lactuca sativa HOM05D008254 ORTHO05D010423 4.2e-16 88.6 56 69.6
Nn1g05870 Nelumbo nucifera HOM05D008254 ORTHO05D010423 4.2e-16 88.6 105 43.8
PSO017G7184 Papaver somniferum HOM05D008254 ORTHO05D010423 7.1e-16 87.8 68 55.9
CANSAT25G2647 Cannabis sativa HOM05D008254 ORTHO05D010423 1.2e-15 87.0 103 48.5
SGA_v2.0_scaffold32G13109 Striga asiatica HOM05D008254 ORTHO05D010423 1.6e-15 86.7 59 66.1
PSO170G6160 Papaver somniferum HOM05D008254 ORTHO05D010423 2.1e-15 86.3 68 54.4
ECA240G0616 Erigeron canadensis HOM05D008254 ORTHO05D010423 2.7e-15 85.9 51 74.5
Oeu009760.1 Olea europaea HOM05D008254 ORTHO05D010423 3.5e-15 85.5 118 42.4
SalBow6G2473 Salvia bowleyana HOM05D008254 ORTHO05D010423 4.6e-15 85.1 66 63.6
PGR042G1247 Punica granatum HOM05D008254 ORTHO05D010423 3.0e-14 82.4 129 38.8
Aqoxy5G01299 Aquilegia oxysepala HOM05D008254 ORTHO05D010423 3.9e-14 82.0 56 62.5
HanXRQChr02g0034931 Helianthus annuus HOM05D008254 ORTHO05D010423 6.7e-14 81.3 69 56.5
HanXRQChr02g0034971 Helianthus annuus HOM05D008254 ORTHO05D010423 6.7e-14 81.3 69 56.5
HanXRQChr03g0080261 Helianthus annuus HOM05D008254 ORTHO05D010423 6.7e-14 81.3 69 56.5
HanXRQChr08g0217421 Helianthus annuus HOM05D008254 ORTHO05D010423 6.7e-14 81.3 69 56.5
Migut.B00312 Erythranthe guttata HOM05D008254 ORTHO05D010423 8.7e-14 80.9 51 72.5
Solyc10g150128.1 Solanum lycopersicum HOM05D008254 ORTHO05D010423 1.5e-13 80.1 74 54.1
DCAR_003621 Daucus carota HOM05D008254 ORTHO05D010423 1.9e-13 79.7 70 54.3
Nitab4.5_0002673g0060 Nicotiana tabacum HOM05D008254 ORTHO05D010423 3.3e-13 79.0 122 39.3
COL.COLO4_32691 Corchorus olitorius HOM05D008254 ORTHO05D010423 5.7e-13 78.2 93 41.9
Sopen10g022350 Solanum pennellii HOM05D008254 ORTHO05D010423 5.7e-13 78.2 66 57.6
HanXRQChr12g0367771 Helianthus annuus HOM05D008254 ORTHO05D010423 7.4e-13 77.8 137 38.7
PGSC0003DMG400008243 Solanum tuberosum HOM05D008254 ORTHO05D010423 1.3e-12 77.0 116 42.2
Cc02_g18530 Coffea canephora HOM05D008254 ORTHO05D010423 1.6e-12 76.6 141 34.0
MBI06_g07359_MAGBIO Magnolia biondii HOM05D008254 ORTHO05D010423 2.8e-12 75.9 139 36.0
HanXRQChr02g0034911 Helianthus annuus HOM05D008254 ORTHO05D010423 3.4e-10 68.9 38 78.9
Hma1.2p1_3161F.1_g333460 Hydrangea macrophylla HOM05D008254 ORTHO05D010423 4.5e-10 68.6 118 38.1
Oeu037642.1 Olea europaea HOM05D008254 ORTHO05D010423 2.9e-09 65.9 37 70.3
SGA_v2.0_scaffold32G13097 Striga asiatica HOM05D008254 ORTHO05D010423 2.9e-09 65.9 49 61.2
HPP92_002305 Vanilla planifolia HOM05D008254 ORTHO05D010423 1.4e-08 63.5 55 56.4
Nitab4.5_0000876g0150 Nicotiana tabacum HOM05D008254 ORTHO05D010423 2.3e-06 56.2 107 34.6
Pp3c8_11550 Physcomitrium patens HOM05D008254 ORTHO05D010423 5.1e-06 55.1 40 62.5


User provided reference genes

Program Settings