Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p036670 Quercus lobata HOM05D010066 ORTHO05D009743 2.2e-246 855.1 422 100.0
QL11p036893 Quercus lobata HOM05D010066 ORTHO05D009743 4.2e-245 850.9 422 99.3
QL11p036882 Quercus lobata HOM05D010066 ORTHO05D009743 1.5e-242 842.4 418 99.0
QL11p036944 Quercus lobata HOM05D010066 ORTHO05D009743 5.4e-208 727.6 423 83.5
QL11p036410 Quercus lobata HOM05D010066 ORTHO05D009743 8.1e-164 580.9 425 70.4
QL11p036388 Quercus lobata HOM05D010066 ORTHO05D009743 3.2e-160 568.9 420 68.6
QL11p038460 Quercus lobata HOM05D010066 ORTHO05D009743 4.0e-54 216.5 459 35.5
QL11p038513 Quercus lobata HOM05D010066 ORTHO05D009743 3.0e-49 200.3 489 33.1
QL11p050245 Quercus lobata HOM05D010066 ORTHO05D009743 7.1e-43 179.1 423 31.4
QL93p0284_0002 Quercus lobata HOM05D010066 ORTHO05D009743 7.1e-43 179.1 423 31.4
QL11p019943 Quercus lobata HOM05D010066 ORTHO05D009743 2.7e-42 177.2 422 32.2
QL01p003691 Quercus lobata HOM05D010066 ORTHO05D009743 2.4e-38 164.1 434 30.4
QL05p039032 Quercus lobata HOM05D048765 ORTHO05D009743 7.4e-32 142.5 367 30.2
QL11p054840 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-31 141.7 267 33.0
QL11p050365 Quercus lobata HOM05D010066 ORTHO05D009743 6.9e-30 136.0 337 29.1
QL11p033269 Quercus lobata HOM05D010066 ORTHO05D009743 9.0e-30 135.6 413 29.5
QL11p056498 Quercus lobata HOM05D010066 ORTHO05D009743 2.2e-28 131.0 393 26.0
QL11p051711 Quercus lobata HOM05D010066 ORTHO05D009743 3.2e-27 127.1 390 30.5
QL11p043786 Quercus lobata HOM05D048765 ORTHO05D009743 5.5e-27 126.3 360 28.3
QL05p053761 Quercus lobata HOM05D010066 ORTHO05D016816 3.0e-25 120.6 433 27.5
QL11p042465 Quercus lobata HOM05D025344 ORTHO05D009743 3.1e-22 110.5 395 26.3
QL11p042411 Quercus lobata HOM05D025344 ORTHO05D009743 4.0e-22 110.2 379 27.7
QL11p045102 Quercus lobata HOM05D010066 ORTHO05D009743 9.0e-22 109.0 261 29.1
Cfa003300 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.6e-21 107.5 311 29.9
Haze_14914 Corylus avellana HOM05D008391 ORTHO05D009743 5.8e-21 106.3 315 30.5
QL11p050103 Quercus lobata HOM05D010066 ORTHO05D009743 2.5e-19 100.9 284 25.4
Haze_19938 Corylus avellana HOM05D008391 ORTHO05D009743 3.2e-19 100.5 353 26.6
Cfa012986 Carpinus fangiana HOM05D008391 ORTHO05D009743 5.5e-19 99.8 283 30.7
Haze_14978 Corylus avellana HOM05D008391 ORTHO05D009743 1.8e-17 94.7 324 28.1
Cfa007291 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.5e-16 91.7 328 27.4
Haze_02253 Corylus avellana HOM05D001291 ORTHO05D009743 3.3e-16 90.5 265 29.4
Haze_02263 Corylus avellana HOM05D008391 ORTHO05D009743 3.3e-16 90.5 265 29.4
QL11p055815 Quercus lobata HOM05D025344 ORTHO05D021181 7.4e-16 89.4 213 29.6
Haze_02251 Corylus avellana HOM05D000722 ORTHO05D000590 1.3e-15 88.6 267 29.6
Haze_14137 Corylus avellana HOM05D008391 ORTHO05D009743 1.3e-15 88.6 276 30.1
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 2.8e-15 87.4 269 29.0
QL11p054864 Quercus lobata HOM05D000003 ORTHO05D000007 1.1e-14 85.5 147 35.4
Haze_02265 Corylus avellana HOM05D008391 ORTHO05D009743 1.8e-14 84.7 263 29.3
Cfa014727 Carpinus fangiana HOM05D008391 ORTHO05D009743 5.3e-14 83.2 273 27.1
Cfa005103 Carpinus fangiana HOM05D008391 ORTHO05D009743 9.0e-14 82.4 228 28.1
Cfa007293 Carpinus fangiana HOM05D008391 ORTHO05D009743 9.0e-14 82.4 269 26.4
QL02p073240 Quercus lobata HOM05D025100 ORTHO05D010877 9.0e-14 82.4 286 27.3
Cfa017751 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.2e-13 82.0 281 27.4
Dinv34884 Davidia involucrata HOM05D010628 ORTHO05D010877 2.0e-13 81.3 234 29.1
Cfa021346 Carpinus fangiana HOM05D008391 ORTHO05D009743 3.4e-13 80.5 217 29.0
Haze_19940 Corylus avellana HOM05D008391 ORTHO05D009743 1.0e-12 79.0 357 24.6
Haze_02255 Corylus avellana HOM05D008391 ORTHO05D009743 1.3e-12 78.6 223 31.4
Haze_19280 Corylus avellana HOM05D008391 ORTHO05D009743 1.3e-12 78.6 347 25.1
Haze_19261 Corylus avellana HOM05D008391 ORTHO05D009743 1.7e-12 78.2 345 23.5
QL11p055392 Quercus lobata HOM05D010066 ORTHO05D009743 2.9e-12 77.4 132 36.4
Haze_19937 Corylus avellana HOM05D008391 ORTHO05D009743 3.8e-12 77.0 339 25.1
Haze_02259 Corylus avellana HOM05D000722 ORTHO05D000590 1.1e-11 75.5 261 26.8
QL11p018809 Quercus lobata HOM05D041046 ORTHO05D021181 1.1e-11 75.5 343 26.2
QL11p003079 Quercus lobata HOM05D010066 ORTHO05D010877 4.2e-11 73.6 280 26.1
QL09p047090 Quercus lobata HOM05D041046 ORTHO05D021181 7.2e-11 72.8 231 25.1
Haze_19712 Corylus avellana HOM05D008391 ORTHO05D009743 1.2e-10 72.0 355 23.1
Rhsim05G0014400 Rhododendron simsii HOM05D012885 ORTHO05D010877 1.6e-10 71.6 266 24.4
Duzib264G0155 Durio zibethinus HOM05D029922 ORTHO05D035097 2.1e-10 71.2 130 34.6
Duzib264G0667 Durio zibethinus HOM05D029922 ORTHO05D035097 2.1e-10 71.2 130 34.6
Aqoxy2G03423 Aquilegia oxysepala HOM05D011324 ORTHO05D013448 6.1e-10 69.7 174 32.2
Rhsim10G0205100 Rhododendron simsii HOM05D012885 ORTHO05D010877 7.9e-10 69.3 266 24.8
Cfa016660 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.8e-09 68.2 178 30.3
QL11p055520 Quercus lobata HOM05D025344 ORTHO05D009743 3.0e-09 67.4 341 24.3
Cfa016887 Carpinus fangiana HOM05D008391 ORTHO05D009743 5.1e-09 66.6 240 29.6
Duzib264G0671 Durio zibethinus HOM05D029922 ORTHO05D035097 5.1e-09 66.6 130 33.1
Cfa007631 Carpinus fangiana HOM05D008391 ORTHO05D009743 6.7e-09 66.2 198 29.3
Rhsim05G0013500 Rhododendron simsii HOM05D012885 ORTHO05D010877 6.7e-09 66.2 265 23.8
C03p37710 Brassica napus HOM05D000249 ORTHO05D000206 2.5e-08 64.3 140 30.0
BolC3t16060H Brassica oleracea HOM05D000249 ORTHO05D000206 2.5e-08 64.3 140 30.0
QL11p003115 Quercus lobata HOM05D010066 ORTHO05D009743 2.5e-08 64.3 104 35.6
Haze_14975 Corylus avellana HOM05D008391 ORTHO05D009743 4.3e-08 63.5 175 26.3
BcaC01g06741 Brassica carinata HOM05D000249 ORTHO05D000206 5.7e-08 63.2 140 29.3
BcaC01g06742 Brassica carinata HOM05D000249 ORTHO05D000206 5.7e-08 63.2 140 29.3
BcaC01g06743 Brassica carinata HOM05D000249 ORTHO05D000206 5.7e-08 63.2 140 29.3
Rhsim10G0208600 Rhododendron simsii HOM05D012885 ORTHO05D010877 7.4e-08 62.8 272 22.1
CSS0027586 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 1.3e-07 62.0 202 23.8
CSS0032255 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 1.3e-07 62.0 202 23.8
Dinv35477 Davidia involucrata HOM05D013363 ORTHO05D015094 1.3e-07 62.0 304 23.0
Rhsim10G0208800 Rhododendron simsii HOM05D012885 ORTHO05D010877 2.2e-07 61.2 273 23.4
AL4G22950 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 2.8e-07 60.8 124 29.8
Haze_19708 Corylus avellana HOM05D008391 ORTHO05D009743 2.8e-07 60.8 263 24.0
Thhalv10026900m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 3.7e-07 60.5 128 29.7
AT3G46050 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 6.3e-07 59.7 135 32.6
CARHR050910 Cardamine hirsuta HOM05D000249 ORTHO05D000206 6.3e-07 59.7 146 28.1
Rhsim10G0205000 Rhododendron simsii HOM05D012885 ORTHO05D010877 6.3e-07 59.7 121 30.6
Dinv25052 Davidia involucrata HOM05D011324 ORTHO05D013448 8.2e-07 59.3 152 33.6
Rhsim12G0126200 Rhododendron simsii HOM05D010628 ORTHO05D010877 8.2e-07 59.3 102 31.4
Dinv35658 Davidia involucrata HOM05D013363 ORTHO05D015094 1.8e-06 58.2 126 30.2
CARHR225340 Cardamine hirsuta HOM05D000249 ORTHO05D000206 2.4e-06 57.8 127 31.5
Aqoxy3G04200 Aquilegia oxysepala HOM05D010066 ORTHO05D011146 3.1e-06 57.4 112 33.0
A08p23370 Brassica napus HOM05D000249 ORTHO05D000206 4.1e-06 57.0 102 32.4
BraA03t12273Z Brassica rapa HOM05D000249 ORTHO05D000206 4.1e-06 57.0 72 45.8
BraA08t34291Z Brassica rapa HOM05D000249 ORTHO05D000206 4.1e-06 57.0 102 32.4
CSS0001088 Camellia sinensis var. sinensis HOM05D012885 ORTHO05D010877 4.1e-06 57.0 104 32.7


User provided reference genes

Program Settings