Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p036388 Quercus lobata HOM05D010066 ORTHO05D009743 4.4e-255 884.0 414 100.0
QL11p036410 Quercus lobata HOM05D010066 ORTHO05D009743 3.3e-226 788.1 414 90.3
QL11p036944 Quercus lobata HOM05D010066 ORTHO05D009743 1.4e-171 606.7 427 71.2
QL11p036882 Quercus lobata HOM05D010066 ORTHO05D009743 1.2e-159 567.0 420 69.0
QL11p036670 Quercus lobata HOM05D010066 ORTHO05D009743 1.0e-158 563.9 420 68.6
QL11p036893 Quercus lobata HOM05D010066 ORTHO05D009743 1.7e-158 563.1 420 68.3
QL11p038460 Quercus lobata HOM05D010066 ORTHO05D009743 1.3e-62 244.6 451 38.1
QL11p038513 Quercus lobata HOM05D010066 ORTHO05D009743 4.2e-56 223.0 392 38.8
QL11p050245 Quercus lobata HOM05D010066 ORTHO05D009743 5.9e-42 176.0 398 33.7
QL93p0284_0002 Quercus lobata HOM05D010066 ORTHO05D009743 5.9e-42 176.0 398 33.7
QL01p003691 Quercus lobata HOM05D010066 ORTHO05D009743 7.7e-42 175.6 364 35.2
QL11p019943 Quercus lobata HOM05D010066 ORTHO05D009743 3.8e-41 173.3 400 33.0
QL11p033269 Quercus lobata HOM05D010066 ORTHO05D009743 8.0e-39 165.6 422 34.1
QL05p039032 Quercus lobata HOM05D048765 ORTHO05D009743 9.7e-37 158.7 354 33.1
QL05p053761 Quercus lobata HOM05D010066 ORTHO05D016816 4.1e-35 153.3 440 29.8
QL11p054840 Quercus lobata HOM05D000002 ORTHO05D000001 7.7e-34 149.1 320 34.1
QL11p050365 Quercus lobata HOM05D010066 ORTHO05D009743 3.8e-33 146.7 375 31.5
QL11p042411 Quercus lobata HOM05D025344 ORTHO05D009743 1.2e-31 141.7 440 31.4
QL11p056498 Quercus lobata HOM05D010066 ORTHO05D009743 1.2e-29 135.2 373 28.2
QL11p042465 Quercus lobata HOM05D025344 ORTHO05D009743 7.5e-29 132.5 448 28.6
QL11p043786 Quercus lobata HOM05D048765 ORTHO05D009743 7.5e-29 132.5 348 30.7
QL11p051711 Quercus lobata HOM05D010066 ORTHO05D009743 1.2e-26 125.2 420 29.8
QL11p045102 Quercus lobata HOM05D010066 ORTHO05D009743 3.5e-26 123.6 319 29.2
QL11p050103 Quercus lobata HOM05D010066 ORTHO05D009743 2.5e-24 117.5 359 27.9
Cfa003300 Carpinus fangiana HOM05D008391 ORTHO05D009743 4.2e-24 116.7 285 31.9
QL11p018809 Quercus lobata HOM05D041046 ORTHO05D021181 3.0e-22 110.5 428 27.6
QL11p026821 Quercus lobata HOM05D061260 ORTHO05D009743 1.5e-21 108.2 336 29.2
QL02p073240 Quercus lobata HOM05D025100 ORTHO05D010877 2.2e-20 104.4 307 28.0
Haze_14137 Corylus avellana HOM05D008391 ORTHO05D009743 8.3e-20 102.4 223 31.8
Haze_19938 Corylus avellana HOM05D008391 ORTHO05D009743 8.3e-20 102.4 335 29.3
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 1.4e-19 101.7 248 30.6
QL11p055815 Quercus lobata HOM05D025344 ORTHO05D021181 1.4e-19 101.7 409 26.2
QL11p026859 Quercus lobata HOM05D061260 ORTHO05D009743 3.1e-19 100.5 317 29.3
Cfa014784 Carpinus fangiana HOM05D008391 ORTHO05D009743 5.4e-19 99.8 305 29.5
Cfa007291 Carpinus fangiana HOM05D008391 ORTHO05D009743 7.0e-19 99.4 338 29.0
QL11p054864 Quercus lobata HOM05D000003 ORTHO05D000007 7.0e-19 99.4 332 28.0
Cfa017751 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.7e-18 97.4 242 29.8
Haze_14978 Corylus avellana HOM05D008391 ORTHO05D009743 7.8e-18 95.9 209 32.5
Cfa007293 Carpinus fangiana HOM05D008391 ORTHO05D009743 6.6e-17 92.8 330 28.2
Haze_02253 Corylus avellana HOM05D001291 ORTHO05D009743 1.1e-16 92.0 272 29.8
Haze_02263 Corylus avellana HOM05D008391 ORTHO05D009743 1.1e-16 92.0 272 29.8
Haze_19712 Corylus avellana HOM05D008391 ORTHO05D009743 2.5e-16 90.9 189 31.2
Haze_19261 Corylus avellana HOM05D008391 ORTHO05D009743 3.3e-16 90.5 315 30.5
QL11p055392 Quercus lobata HOM05D010066 ORTHO05D009743 5.6e-16 89.7 194 33.0
QL11p055520 Quercus lobata HOM05D025344 ORTHO05D009743 5.6e-16 89.7 418 26.3
Haze_19280 Corylus avellana HOM05D008391 ORTHO05D009743 9.5e-16 89.0 317 29.3
Haze_02251 Corylus avellana HOM05D000722 ORTHO05D000590 2.1e-15 87.8 272 28.3
Cfa014727 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.8e-15 87.4 220 31.8
Cfa016660 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.8e-15 87.4 163 33.1
QL09p047090 Quercus lobata HOM05D041046 ORTHO05D021181 4.7e-15 86.7 227 29.5
QL02p072942 Quercus lobata HOM05D025100 ORTHO05D010877 1.8e-14 84.7 278 29.1
Cfa005103 Carpinus fangiana HOM05D008391 ORTHO05D009743 3.0e-14 84.0 245 31.4
Rhsim01G0094100 Rhododendron simsii HOM05D013052 ORTHO05D012831 3.4e-13 80.5 183 33.9
Rhsim05G0014400 Rhododendron simsii HOM05D012885 ORTHO05D010877 3.4e-13 80.5 283 27.6
RhsimUnG0085000 Rhododendron simsii HOM05D013052 ORTHO05D012831 3.4e-13 80.5 183 33.9
Haze_02265 Corylus avellana HOM05D008391 ORTHO05D009743 7.5e-13 79.3 297 27.9
Dinv34884 Davidia involucrata HOM05D010628 ORTHO05D010877 7.5e-13 79.3 213 31.5
Duzib264G0155 Durio zibethinus HOM05D029922 ORTHO05D035097 9.8e-13 79.0 217 30.0
Duzib264G0667 Durio zibethinus HOM05D029922 ORTHO05D035097 9.8e-13 79.0 217 30.0
Haze_02259 Corylus avellana HOM05D000722 ORTHO05D000590 1.3e-12 78.6 307 26.1
CSS0015488 Camellia sinensis var. sinensis HOM05D018855 ORTHO05D012831 3.7e-12 77.0 190 30.5
QL11p003079 Quercus lobata HOM05D010066 ORTHO05D010877 6.4e-12 76.3 306 28.8
Haze_02255 Corylus avellana HOM05D008391 ORTHO05D009743 1.1e-11 75.5 297 27.3
Duzib264G0671 Durio zibethinus HOM05D029922 ORTHO05D035097 2.4e-11 74.3 217 29.0
CSS0029553 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 5.4e-11 73.2 254 31.1
QL11p003115 Quercus lobata HOM05D010066 ORTHO05D009743 7.0e-11 72.8 362 25.4
Rhsim05G0013500 Rhododendron simsii HOM05D012885 ORTHO05D010877 1.2e-10 72.0 256 27.3
Rhsim12G0126200 Rhododendron simsii HOM05D010628 ORTHO05D010877 1.2e-10 72.0 293 25.9
Aqoxy2G03423 Aquilegia oxysepala HOM05D011324 ORTHO05D013448 2.0e-10 71.2 192 31.8
BcaC09g51721 Brassica carinata HOM05D000249 ORTHO05D000206 2.7e-10 70.9 220 30.0
C01p10140 Brassica napus HOM05D000249 ORTHO05D000206 2.7e-10 70.9 220 30.0
Rhsim10G0208600 Rhododendron simsii HOM05D012885 ORTHO05D010877 3.5e-10 70.5 290 26.9
Cfa021346 Carpinus fangiana HOM05D008391 ORTHO05D009743 5.9e-10 69.7 243 28.8
Rhsim01G0094200 Rhododendron simsii HOM05D013052 ORTHO05D012831 7.8e-10 69.3 186 28.5
Ah.04g152630 Amaranthus hybridus HOM05D014492 ORTHO05D015818 1.3e-09 68.6 163 28.2
Ah.04g152570 Amaranthus hybridus HOM05D014492 ORTHO05D015818 1.7e-09 68.2 163 27.6
Ah.04g152650 Amaranthus hybridus HOM05D014492 ORTHO05D015818 2.3e-09 67.8 164 27.4
C03p37710 Brassica napus HOM05D000249 ORTHO05D000206 3.0e-09 67.4 156 31.4
BolC3t16060H Brassica oleracea HOM05D000249 ORTHO05D000206 3.0e-09 67.4 156 31.4
Rhsim10G0208800 Rhododendron simsii HOM05D012885 ORTHO05D010877 3.0e-09 67.4 295 24.7
BolC1t00971H Brassica oleracea HOM05D000249 ORTHO05D000206 3.9e-09 67.0 220 30.0
Haze_14975 Corylus avellana HOM05D008391 ORTHO05D009743 1.1e-08 65.5 167 28.7
Ah.01g016270 Amaranthus hybridus HOM05D036488 ORTHO05D021181 1.5e-08 65.1 159 30.8
Ah.01g016360 Amaranthus hybridus HOM05D036488 ORTHO05D021181 1.5e-08 65.1 159 30.8
Ah.01g016440 Amaranthus hybridus HOM05D036488 ORTHO05D021181 1.5e-08 65.1 159 30.8
BcaC01g06741 Brassica carinata HOM05D000249 ORTHO05D000206 1.9e-08 64.7 156 30.1
BcaC01g06742 Brassica carinata HOM05D000249 ORTHO05D000206 1.9e-08 64.7 156 30.1
BcaC01g06743 Brassica carinata HOM05D000249 ORTHO05D000206 1.9e-08 64.7 156 30.1
Cfa016758 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.5e-08 64.3 164 32.3
CSS0008723 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 3.3e-08 63.9 266 25.9
CSS0016779 Camellia sinensis var. sinensis HOM05D018855 ORTHO05D012831 5.6e-08 63.2 192 27.6
Rhsim10G0205100 Rhododendron simsii HOM05D012885 ORTHO05D010877 5.6e-08 63.2 264 26.1
Cfa005104 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.2e-07 62.0 169 30.8
COL.COLO4_31293 Corchorus olitorius HOM05D001422 ORTHO05D001321 2.1e-07 61.2 182 26.9
Lj5A253T37 Lonicera japonica HOM05D012292 ORTHO05D012234 2.1e-07 61.2 197 28.9
Rhsim03G0039300 Rhododendron simsii HOM05D018081 ORTHO05D010877 2.8e-07 60.8 161 30.4
Dinv25052 Davidia involucrata HOM05D011324 ORTHO05D013448 4.7e-07 60.1 212 30.2
Lj2P283T62 Lonicera japonica HOM05D007183 ORTHO05D008829 6.2e-07 59.7 69 42.0
Rhsim07G0232000 Rhododendron simsii HOM05D010628 ORTHO05D010877 8.0e-07 59.3 226 25.7
DCAR_012700 Daucus carota HOM05D014492 ORTHO05D015818 1.1e-06 58.9 114 36.8
Rhsim10G0205000 Rhododendron simsii HOM05D012885 ORTHO05D010877 1.1e-06 58.9 270 24.8
Rhsim07G0240100 Rhododendron simsii HOM05D013052 ORTHO05D012831 1.4e-06 58.5 282 27.0
Thecc.02G174600 Theobroma cacao HOM05D007183 ORTHO05D008829 1.4e-06 58.5 142 31.7
C01p00590 Brassica napus HOM05D000249 ORTHO05D000206 2.3e-06 57.8 157 29.3
CARHR225340 Cardamine hirsuta HOM05D000249 ORTHO05D000206 3.1e-06 57.4 155 29.0
CARHR247150 Cardamine hirsuta HOM05D000249 ORTHO05D000206 3.1e-06 57.4 156 26.3
Rhsim03G0231000 Rhododendron simsii HOM05D018081 ORTHO05D026100 3.1e-06 57.4 112 34.8
AL7G50760 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 4.0e-06 57.0 153 28.1
CSS0002818 Camellia sinensis var. sinensis HOM05D018855 ORTHO05D012831 4.0e-06 57.0 190 26.3
Aqoxy3G04200 Aquilegia oxysepala HOM05D010066 ORTHO05D011146 5.2e-06 56.6 117 31.6
CARHR050910 Cardamine hirsuta HOM05D000249 ORTHO05D000206 5.2e-06 56.6 189 23.8
GSVIVG01030561001 Vitis vinifera HOM05D007183 ORTHO05D008829 5.2e-06 56.6 106 33.0
C01p08810 Brassica napus HOM05D000249 ORTHO05D000206 6.8e-06 56.2 114 30.7
BolC1t00871H Brassica oleracea HOM05D000249 ORTHO05D000206 6.8e-06 56.2 114 30.7
Carub.0002s0602 Capsella rubella HOM05D000249 ORTHO05D000206 6.8e-06 56.2 69 42.0
Cpa.g.sc34.121 Carica papaya HOM05D007183 ORTHO05D008829 6.8e-06 56.2 96 35.4
Cfa015317 Carpinus fangiana HOM05D008391 ORTHO05D009743 6.8e-06 56.2 182 28.0
RhsimUnG0033600 Rhododendron simsii HOM05D010628 ORTHO05D010877 6.8e-06 56.2 226 25.2
TPR.G36795 Trifolium pratense HOM05D007183 ORTHO05D008829 6.8e-06 56.2 158 27.2
TAR629G0430 Trochodendron aralioides HOM05D007183 ORTHO05D008829 6.8e-06 56.2 105 33.3
AT4G39753 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 8.9e-06 55.8 69 42.0
AT5G03020 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 8.9e-06 55.8 123 32.5


User provided reference genes

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