Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p036227 Quercus lobata HOM05D003855 ORTHO05D004722 0.0e+00 2174.8 1104 100.0
Cfa005469 Carpinus fangiana HOM05D003855 ORTHO05D004722 0.0e+00 1895.6 1112 86.3
CiPaw.05G052400 Carya illinoinensis HOM05D003855 ORTHO05D004722 0.0e+00 1824.3 1117 83.1
Prupe.8G122100 Prunus persica HOM05D003855 ORTHO05D004722 0.0e+00 1822.0 1118 82.4
Cpa.g.sc62.29 Carica papaya HOM05D003855 ORTHO05D004722 0.0e+00 1812.3 1116 82.8
Gorai.012G150300 Gossypium raimondii HOM05D003855 ORTHO05D004722 0.0e+00 1800.0 1116 81.5
Gohir.D04G162300 Gossypium hirsutum HOM05D003855 ORTHO05D004722 0.0e+00 1796.9 1116 81.4
Duzib052G0714 Durio zibethinus HOM05D003855 ORTHO05D004722 0.0e+00 1794.6 1113 81.9
Dinv42141 Davidia involucrata HOM05D003855 ORTHO05D004722 0.0e+00 1788.9 1112 81.2
Thecc.02G098600 Theobroma cacao HOM05D003855 ORTHO05D004722 0.0e+00 1787.7 1114 81.6
FAN15G0137 Fragaria x ananassa HOM05D003855 ORTHO05D004722 0.0e+00 1786.5 1138 80.2
Gohir.A04G120800 Gossypium hirsutum HOM05D003855 ORTHO05D004722 0.0e+00 1785.0 1116 81.2
RcHm_v2.0_Chr6g0258261 Rosa chinensis HOM05D003855 ORTHO05D004722 0.0e+00 1782.7 1118 81.0
Ciclev10027722m.g Citrus clementina HOM05D003855 ORTHO05D004722 0.0e+00 1777.7 1113 81.2
FvH4_2g06380 Fragaria vesca HOM05D003855 ORTHO05D004722 0.0e+00 1775.8 1110 81.4
CSS0001000 Camellia sinensis var. sinensis HOM05D003855 ORTHO05D004722 0.0e+00 1774.6 1109 80.9
GSVIVG01031766001 Vitis vinifera HOM05D003855 ORTHO05D004722 0.0e+00 1771.5 1116 81.3
Manes.10G066200 Manihot esculenta HOM05D003855 ORTHO05D004722 0.0e+00 1769.2 1104 81.3
TWI79G1596 Tripterygium wilfordii HOM05D003855 ORTHO05D004722 0.0e+00 1761.9 1121 80.3
FAN20G0084 Fragaria x ananassa HOM05D003855 ORTHO05D004722 0.0e+00 1761.5 1192 76.7
Eucgr.G01465 Eucalyptus grandis HOM05D003855 ORTHO05D004722 0.0e+00 1758.4 1114 82.0
COL.COLO4_32675 Corchorus olitorius HOM05D003855 ORTHO05D004722 0.0e+00 1757.3 1114 80.3
Potri.004G142300 Populus trichocarpa HOM05D003855 ORTHO05D004722 0.0e+00 1756.1 1114 80.6
TAR381G1366 Trochodendron aralioides HOM05D003855 ORTHO05D004722 0.0e+00 1755.0 1115 80.1
MELO3C018441.2 Cucumis melo HOM05D003855 ORTHO05D004722 0.0e+00 1753.4 1113 79.4
Sabra09G0079400 Salix brachista HOM05D003855 ORTHO05D004722 0.0e+00 1753.4 1088 81.7
FAN27G3432 Fragaria x ananassa HOM05D003855 ORTHO05D004722 0.0e+00 1750.3 1110 80.4
Nn5g30224 Nelumbo nucifera HOM05D003855 ORTHO05D004722 0.0e+00 1746.5 1114 79.3
CsaV3_7G008690 Cucumis sativus L. HOM05D003855 ORTHO05D004722 0.0e+00 1744.6 1104 79.3
Potri.009G103700 Populus trichocarpa HOM05D003855 ORTHO05D004722 0.0e+00 1742.6 1088 81.2
Dinv23608 Davidia involucrata HOM05D003855 ORTHO05D004722 0.0e+00 1740.3 1099 79.8
PGR042G3302 Punica granatum HOM05D003855 ORTHO05D004722 0.0e+00 1740.3 1095 81.2
Sed0020763 Sechium edule HOM05D003855 ORTHO05D004722 0.0e+00 1731.5 1114 78.5
Sabra04G0094100 Salix brachista HOM05D003855 ORTHO05D004722 0.0e+00 1727.6 1029 84.1
Aqoxy6G01362 Aquilegia oxysepala HOM05D003855 ORTHO05D004722 0.0e+00 1716.4 1036 82.4
SalBow6G4323 Salvia bowleyana HOM05D003855 ORTHO05D004722 0.0e+00 1715.3 1113 77.6
DCAR_029027 Daucus carota HOM05D003855 ORTHO05D004722 0.0e+00 1714.9 1108 78.3
MBI06_g04502_MAGBIO Magnolia biondii HOM05D003855 ORTHO05D004722 0.0e+00 1713.7 1118 78.4
Oeu007277.1 Olea europaea HOM05D003855 ORTHO05D004722 0.0e+00 1712.2 1114 78.3
Ca_24336_v3 Cicer arietinum L. HOM05D003855 ORTHO05D004722 0.0e+00 1709.1 1103 78.7
Peaxi162Scf00016g01731 Petunia axillaris HOM05D003855 ORTHO05D004722 0.0e+00 1708.7 1104 77.6
Lj1g0003010 Lotus japonicus HOM05D003855 ORTHO05D004722 0.0e+00 1703.0 1033 81.9
PGSC0003DMG400025820 Solanum tuberosum HOM05D003855 ORTHO05D004722 0.0e+00 1701.4 1110 77.1
Solyc01g108600.3 Solanum lycopersicum HOM05D003855 ORTHO05D004722 0.0e+00 1701.0 1110 77.1
Sopen01g050820 Solanum pennellii HOM05D003855 ORTHO05D004722 0.0e+00 1700.6 1110 77.2
ECA234G3461 Erigeron canadensis HOM05D003855 ORTHO05D004722 0.0e+00 1699.9 1103 78.2
Migut.B00330 Erythranthe guttata HOM05D003855 ORTHO05D004722 0.0e+00 1699.1 1108 77.7
MSTRG.16753 Avicennia marina HOM05D003855 ORTHO05D004722 0.0e+00 1697.2 1108 77.3
Medtr5g004680 Medicago truncatula HOM05D003855 ORTHO05D004722 0.0e+00 1694.5 1102 78.3
Glyma.01G244900 Glycine max HOM05D003855 ORTHO05D004722 0.0e+00 1692.9 1140 76.4
Lalb_Chr16g0376231 Lupinus albus HOM05D003855 ORTHO05D004722 0.0e+00 1692.9 1029 81.7
PSO675G1899 Papaver somniferum HOM05D003855 ORTHO05D004722 0.0e+00 1692.9 1032 81.8
Psat4g213560 Pisum sativum HOM05D003855 ORTHO05D004722 0.0e+00 1688.3 1101 78.2
Nitab4.5_0001899g0100 Nicotiana tabacum HOM05D003855 ORTHO05D004722 0.0e+00 1683.7 1112 77.0
BraA01t03617Z Brassica rapa HOM05D003855 ORTHO05D004722 0.0e+00 1679.8 1108 76.4
Sc08g0000010 Simmondsia chinensis HOM05D003855 ORTHO05D004722 0.0e+00 1678.7 1111 75.9
PSO541G0814 Papaver somniferum HOM05D003855 ORTHO05D004722 0.0e+00 1676.4 1032 80.9
Phvul.002G054400 Phaseolus vulgaris HOM05D003855 ORTHO05D004722 0.0e+00 1676.4 1105 77.2
Sp3g17240 Schrenkiella parvula HOM05D003855 ORTHO05D004722 0.0e+00 1674.4 1110 76.3
THA.LOC104818544 Tarenaya hassleriana HOM05D003855 ORTHO05D004722 0.0e+00 1673.7 1112 76.5
Thhalv10019955m.g Eutrema salsugineum HOM05D003855 ORTHO05D004722 0.0e+00 1672.9 1114 76.0
HanXRQChr10g0301751 Helianthus annuus HOM05D003855 ORTHO05D004722 0.0e+00 1672.9 1104 76.7
AL3G32540 Arabidopsis lyrata HOM05D003855 ORTHO05D004722 0.0e+00 1669.4 1115 75.2
AT3G19170 Arabidopsis thaliana HOM05D003855 ORTHO05D004722 0.0e+00 1668.7 1114 75.3
C01p44870 Brassica napus HOM05D003855 ORTHO05D004722 0.0e+00 1667.5 1109 75.5
VMungo1215G1975 Vigna mungo HOM05D003855 ORTHO05D004722 0.0e+00 1667.5 1107 76.7
arahy.Tifrunner.gnm1.ann1.7G1ZKD Arachis hypogaea HOM05D003855 ORTHO05D004722 0.0e+00 1666.4 1104 77.2
Thhalv10011199m.g Eutrema salsugineum HOM05D003855 ORTHO05D004722 0.0e+00 1665.6 1110 76.1
AT1G49630 Arabidopsis thaliana HOM05D003855 ORTHO05D004722 0.0e+00 1664.0 1107 75.8
BcaB04g19030 Brassica carinata HOM05D003855 ORTHO05D004722 0.0e+00 1664.0 1109 75.8
A03p41100 Brassica napus HOM05D003855 ORTHO05D004722 0.0e+00 1663.7 1112 76.0
CDE10G0143 Ceratophyllum demersum HOM05D003855 ORTHO05D004722 0.0e+00 1663.3 1110 75.3
Cc02_g18640 Coffea canephora HOM05D003855 ORTHO05D004722 0.0e+00 1663.3 1111 75.3
THA.LOC104801598 Tarenaya hassleriana HOM05D003855 ORTHO05D004722 0.0e+00 1662.9 1085 76.8
Carub.0003s1899 Capsella rubella HOM05D003855 ORTHO05D004722 0.0e+00 1662.5 1115 75.2
Carub.0001s3883 Capsella rubella HOM05D003855 ORTHO05D004722 0.0e+00 1659.8 1113 75.7
BraA03t13267Z Brassica rapa HOM05D003855 ORTHO05D004722 0.0e+00 1657.5 1112 75.5
Sp1g36500 Schrenkiella parvula HOM05D003855 ORTHO05D004722 0.0e+00 1656.0 1089 76.3
A01p35360 Brassica napus HOM05D003855 ORTHO05D004722 0.0e+00 1655.6 1108 75.5
Hund00328 Selenicereus undatus HOM05D003855 ORTHO05D004722 0.0e+00 1655.6 1111 75.0
AL1G57020 Arabidopsis lyrata HOM05D003855 ORTHO05D004722 0.0e+00 1654.8 1110 75.7
CARHR094570 Cardamine hirsuta HOM05D003855 ORTHO05D004722 0.0e+00 1651.0 1112 74.9
BcaB07g33638 Brassica carinata HOM05D003855 ORTHO05D004722 0.0e+00 1650.2 1037 78.5
SGA_v2.0_scaffold32G13071 Striga asiatica HOM05D003855 ORTHO05D004722 0.0e+00 1649.4 1129 74.6
C06p04590 Brassica napus HOM05D003855 ORTHO05D004722 0.0e+00 1649.0 1016 78.9
Nitab4.5_0002097g0080 Nicotiana tabacum HOM05D003855 ORTHO05D004722 0.0e+00 1649.0 1112 75.9
BolC1t04455H Brassica oleracea HOM05D003855 ORTHO05D004722 0.0e+00 1648.3 1159 72.4
C03p50190 Brassica napus HOM05D003855 ORTHO05D004722 0.0e+00 1646.7 1112 75.3
A06p03570 Brassica napus HOM05D003855 ORTHO05D004722 0.0e+00 1646.3 1016 79.1
Ah.01g020190 Amaranthus hybridus HOM05D003855 ORTHO05D004722 0.0e+00 1645.9 1116 75.2
BcaC01g03642 Brassica carinata HOM05D003855 ORTHO05D004722 0.0e+00 1645.9 1112 75.1
BolC3t17311H Brassica oleracea HOM05D003855 ORTHO05D004722 0.0e+00 1645.9 1112 75.2
Aa31LG8G5960 Aethionema arabicum HOM05D003855 ORTHO05D004722 0.0e+00 1643.2 1115 74.8
BolC6t35586H Brassica oleracea HOM05D003855 ORTHO05D004722 0.0e+00 1642.1 1016 79.0
vmacro02191 Vaccinium macrocarpon HOM05D003855 ORTHO05D004722 0.0e+00 1641.7 1190 72.0
BcaC08g43166 Brassica carinata HOM05D003855 ORTHO05D004722 0.0e+00 1640.9 1016 78.9
BraA06t23565Z Brassica rapa HOM05D003855 ORTHO05D004722 0.0e+00 1632.8 1016 78.8
ATR0100G044 Amborella trichopoda HOM05D003855 ORTHO05D004722 0.0e+00 1632.5 1106 74.0
Rhsim11G0167000 Rhododendron simsii HOM05D003855 ORTHO05D004722 0.0e+00 1632.1 1220 70.0
Zm00001eb255690 Zea mays HOM05D003855 ORTHO05D004722 0.0e+00 1622.8 1026 78.7
Lsat_1_v5_gn_5_112961 Lactuca sativa HOM05D003855 ORTHO05D004722 0.0e+00 1620.9 1105 75.0
AUR62011441 Chenopodium quinoa HOM05D003855 ORTHO05D004722 0.0e+00 1614.0 1121 74.2
Aa31LG10G4390 Aethionema arabicum HOM05D003855 ORTHO05D004722 0.0e+00 1612.4 1070 75.9
EL10Ac9g21832 Beta vulgaris HOM05D003855 ORTHO05D004722 0.0e+00 1603.2 1101 74.6
ClCG02G005810 Citrullus lanatus HOM05D003855 ORTHO05D004722 0.0e+00 1582.0 1144 71.9
DCAR_001621 Daucus carota HOM05D003855 ORTHO05D004722 0.0e+00 1546.9 1098 72.0
MD10G1092200 Malus domestica HOM05D003855 ORTHO05D004722 0.0e+00 1534.6 1121 73.1
TPR.G21611 Trifolium pratense HOM05D003855 ORTHO05D004722 0.0e+00 1530.0 936 81.2
AUR62016621 Chenopodium quinoa HOM05D003855 ORTHO05D004722 0.0e+00 1528.8 969 78.1
Haze_01847 Corylus avellana HOM05D003855 ORTHO05D004722 0.0e+00 1514.6 1132 71.6
Haze_01842 Corylus avellana HOM05D003855 ORTHO05D004722 0.0e+00 1513.4 1132 71.6
Lj5A208T47 Lonicera japonica HOM05D003855 ORTHO05D004722 0.0e+00 1499.6 891 82.7
SGA_v2.0_scaffold90G27671 Striga asiatica HOM05D003855 ORTHO05D004722 0.0e+00 1478.8 1024 72.9
Pp3c5_3160 Physcomitrium patens HOM05D003855 ORTHO05D004722 0.0e+00 1448.3 1098 66.8
Mapoly0138s0034 Marchantia polymorpha HOM05D003855 ORTHO05D004722 0.0e+00 1419.1 1036 67.0
arahy.Tifrunner.gnm1.ann1.920WM2 Arachis hypogaea HOM05D003855 ORTHO05D004722 0.0e+00 1355.9 803 82.9
SMO169G0211 Selaginella moellendorffii HOM05D003855 ORTHO05D004722 0.0e+00 1352.8 980 68.0
CBR_g17894 Chara braunii HOM05D003855 ORTHO05D004722 0.0e+00 1286.9 1000 64.3
Prupe.8G122200 Prunus persica HOM05D003855 ORTHO05D004722 0.0e+00 1271.9 1101 61.5
MD11G1150900 Malus domestica HOM05D003855 ORTHO05D004722 0.0e+00 1224.5 782 80.9
CAN.G1041.7 Capsicum annuum HOM05D003855 ORTHO05D004722 0.0e+00 1210.3 747 80.7
HPP92_005967 Vanilla planifolia HOM05D003855 ORTHO05D004722 0.0e+00 1193.3 873 69.8
CARHR039670 Cardamine hirsuta HOM05D003855 ORTHO05D004722 0.0e+00 1171.4 722 79.9
Cre01.g020918 Chlamydomonas reinhardtii HOM05D003855 ORTHO05D004722 0.0e+00 1132.5 1054 54.8
MCO05G354 Micromonas commoda HOM05D003855 ORTHO05D004722 0.0e+00 1124.0 991 55.1
PRCOL_00004407 Prasinoderma coloniale HOM05D003855 ORTHO05D004722 0.0e+00 1078.9 1007 54.6
DCAR_001622 Daucus carota HOM05D003855 ORTHO05D004722 2.2e-309 1065.8 738 72.4
MD05G1078000 Malus domestica HOM05D003855 ORTHO05D004722 1.1e-300 1036.9 904 60.6
unitig_21.g20751 Utricularia gibba HOM05D003855 ORTHO05D004722 8.1e-272 941.0 920 57.2
Mapoly0813s0001 Marchantia polymorpha HOM05D003855 ORTHO05D004722 5.4e-268 928.3 776 59.8
Actinidia00451 Actinidia chinensis HOM05D003855 ORTHO05D004722 2.1e-267 926.4 595 78.0
SHI05876 Sapria himalayana HOM05D003855 ORTHO05D004722 3.2e-260 902.5 603 73.3
CBR_g29853 Chara braunii HOM05D003855 ORTHO05D004722 2.8e-240 836.3 990 44.7
Mapoly0138s0037 Marchantia polymorpha HOM05D003855 ORTHO05D004722 5.7e-217 758.8 670 57.5
ECA238G1787 Erigeron canadensis HOM05D003855 ORTHO05D004722 2.5e-212 743.4 641 60.7
HanXRQChr07g0196921 Helianthus annuus HOM05D003855 ORTHO05D004722 1.0e-210 738.0 694 56.5
Actinidia00452 Actinidia chinensis HOM05D003855 ORTHO05D004722 5.2e-202 709.1 479 75.8
Ciclev10029929m.g Citrus clementina HOM05D003855 ORTHO05D004722 4.4e-185 652.9 510 69.6
Atru.chr5.2746 Acer truncatum HOM05D003855 ORTHO05D004722 1.9e-180 637.5 446 72.9
SEGI_28735 Sequoiadendron giganteum HOM05D003855 ORTHO05D004722 3.3e-180 636.7 413 77.2
Actinidia12962 Actinidia chinensis HOM05D003855 ORTHO05D004722 4.2e-180 636.3 532 64.5
Atru.chr5.2745 Acer truncatum HOM05D003855 ORTHO05D004722 1.7e-168 597.8 347 87.6
Ciclev10030315m.g Citrus clementina HOM05D003855 ORTHO05D004722 3.2e-167 593.6 502 65.5
Lsat_1_v5_gn_2_29981 Lactuca sativa HOM05D003855 ORTHO05D004722 4.1e-159 566.6 392 69.4
SHI03491 Sapria himalayana HOM05D000105 ORTHO05D004722 6.2e-155 552.7 428 65.9
SHI05877 Sapria himalayana HOM05D003855 ORTHO05D004722 6.4e-136 489.6 396 63.6
CAN.G1041.6 Capsicum annuum HOM05D003855 ORTHO05D004722 9.6e-132 475.7 411 62.5
HPP92_005974 Vanilla planifolia HOM05D003855 ORTHO05D004722 1.4e-130 471.9 308 75.0
SEGI_28882 Sequoiadendron giganteum HOM05D003855 ORTHO05D004722 4.2e-127 460.3 329 68.7
MCO14G172 Micromonas commoda HOM05D003855 ORTHO05D004722 7.6e-113 412.9 1019 30.6
FAN24G2426 Fragaria x ananassa HOM05D003855 ORTHO05D004722 2.7e-110 404.4 289 75.4
Atru.chr5.2744 Acer truncatum HOM05D003855 ORTHO05D004722 2.6e-105 387.9 226 84.1
PRCOL_00005085 Prasinoderma coloniale HOM05D003855 ORTHO05D004722 3.6e-102 377.5 971 28.6
Cfa026983 Carpinus fangiana HOM05D003855 ORTHO05D004722 9.7e-100 369.4 981 28.2
PRCOL_00005679 Prasinoderma coloniale HOM05D003855 ORTHO05D004722 2.6e-92 344.7 922 29.6
SEGI_22772 Sequoiadendron giganteum HOM05D003855 ORTHO05D004722 2.8e-75 288.1 176 77.3
MD05G1078600 Malus domestica HOM05D003855 ORTHO05D004722 1.5e-60 239.2 222 55.9
CBR_g30953 Chara braunii HOM05D003855 ORTHO05D004722 7.0e-58 230.3 847 24.7
MD05G1077700 Malus domestica HOM05D003855 ORTHO05D004722 1.1e-55 223.0 310 46.1
Aqoxy7G03045 Aquilegia oxysepala HOM05D003855 ORTHO05D004722 3.6e-54 218.0 331 37.8
MD05G1078400 Malus domestica HOM05D003855 ORTHO05D246709 2.8e-46 191.8 220 54.5
Os02g0761400 Oryza sativa ssp. japonica HOM05D003855 ORTHO05D004722 4.7e-46 191.0 123 79.7
SHI03495 Sapria himalayana HOM05D000119 ORTHO05D000054 2.9e-43 181.8 154 61.0
MD05G1077600 Malus domestica HOM05D003855 ORTHO05D004722 9.2e-42 176.8 176 54.0
Mapoly0138s0035 Marchantia polymorpha HOM05D003855 ORTHO05D004722 1.0e-40 173.3 150 58.7
COL.COLO4_14247 Corchorus olitorius HOM05D003855 ORTHO05D004722 9.5e-39 166.8 134 66.4
MD05G1078300 Malus domestica HOM05D003855 ORTHO05D249195 2.3e-37 162.2 296 35.8
Sc23g0007040 Simmondsia chinensis HOM05D003855 ORTHO05D004722 2.0e-36 159.1 149 56.4
CBR_g46009 Chara braunii HOM05D003248 ORTHO05D000301 6.0e-33 147.5 485 27.0
CBR_g30954 Chara braunii HOM05D003855 ORTHO05D004722 3.9e-32 144.8 162 42.6
CBR_g53546 Chara braunii HOM05D003855 ORTHO05D000497 1.4e-26 126.3 448 26.3
Lj5A208T46 Lonicera japonica HOM05D003855 ORTHO05D004722 2.1e-25 122.5 161 50.9
SHI06221 Sapria himalayana HOM05D003855 ORTHO05D000001 1.9e-23 115.9 111 51.4
MD05G1077900 Malus domestica HOM05D003855 ORTHO05D004722 4.3e-23 114.8 99 60.6
CBR_g53548 Chara braunii HOM05D003855 ORTHO05D004722 9.6e-23 113.6 296 26.4
Actinidia12961 Actinidia chinensis HOM05D003855 ORTHO05D004722 2.1e-17 95.9 82 61.0
AUR62024613 Chenopodium quinoa HOM05D025040 ORTHO05D138236 6.9e-13 80.9 56 67.9
MD07G1090800 Malus domestica HOM05D003855 ORTHO05D247201 4.5e-12 78.2 80 51.2
Lsat_1_v5_gn_9_77040 Lactuca sativa HOM05D003409 ORTHO05D004015 8.4e-11 73.9 45 77.8
VMungo1309G1152 Vigna mungo HOM05D003855 ORTHO05D000575 1.9e-10 72.8 49 67.3
Lsat_1_v5_gn_1_14301 Lactuca sativa HOM05D003855 ORTHO05D004560 1.3e-08 66.6 36 86.1
Psat1g111840 Pisum sativum HOM05D001198 ORTHO05D001599 2.3e-08 65.9 172 38.4
MD05G1078700 Malus domestica HOM05D003855 ORTHO05D004722 5.6e-07 61.2 77 44.2
ClCG02G005830 Citrullus lanatus HOM05D003855 ORTHO05D004722 2.8e-06 58.9 40 72.5


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