Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p035967 Quercus lobata HOM05D006253 ORTHO05D007666 2.5e-87 325.5 171 100.0
Gohir.A01G006900 Gossypium hirsutum HOM05D006253 ORTHO05D007666 1.8e-77 292.7 171 87.7
Gorai.002G008000 Gossypium raimondii HOM05D006253 ORTHO05D007666 3.0e-77 292.0 171 87.7
Thecc.02G100600 Theobroma cacao HOM05D006253 ORTHO05D007666 1.5e-76 289.7 171 86.5
CiPaw.05G006400 Carya illinoinensis HOM05D006253 ORTHO05D007666 5.7e-76 287.7 171 85.4
Gohir.D01G007000 Gossypium hirsutum HOM05D006253 ORTHO05D007666 7.5e-76 287.3 171 86.5
RcHm_v2.0_Chr6g0257111 Rosa chinensis HOM05D006253 ORTHO05D007666 2.2e-75 285.8 173 85.5
COL.COLO4_32658 Corchorus olitorius HOM05D006253 ORTHO05D007666 4.9e-75 284.6 171 85.4
GSVIVG01031749001 Vitis vinifera HOM05D006253 ORTHO05D007666 4.9e-75 284.6 171 84.2
Manes.01G064000 Manihot esculenta HOM05D006253 ORTHO05D007666 6.3e-75 284.3 171 85.4
Prupe.8G124200 Prunus persica HOM05D006253 ORTHO05D007666 8.3e-75 283.9 173 85.5
FvH4_2g06110 Fragaria vesca HOM05D006253 ORTHO05D007666 1.4e-74 283.1 173 84.4
FAN24G2487 Fragaria x ananassa HOM05D006253 ORTHO05D007666 1.4e-74 283.1 173 84.4
TAR376G0695 Trochodendron aralioides HOM05D006253 ORTHO05D007666 4.1e-74 281.6 171 84.2
Potri.004G141400 Populus trichocarpa HOM05D006253 ORTHO05D007666 7.0e-74 280.8 172 84.9
Actinidia12952 Actinidia chinensis HOM05D006253 ORTHO05D007666 1.2e-73 280.0 172 85.5
Rhsim03G0192100 Rhododendron simsii HOM05D006253 ORTHO05D007666 2.7e-73 278.9 171 83.0
Sabra04G0093200 Salix brachista HOM05D006253 ORTHO05D007666 2.7e-73 278.9 172 84.3
FAN27G3246 Fragaria x ananassa HOM05D006253 ORTHO05D007666 3.5e-73 278.5 179 82.7
VMungo1080G0444 Vigna mungo HOM05D006253 ORTHO05D007666 7.8e-73 277.3 171 83.0
Lj6g0019810 Lotus japonicus HOM05D006253 ORTHO05D007666 1.3e-72 276.6 171 82.5
Nn5g30328 Nelumbo nucifera HOM05D006253 ORTHO05D007666 1.3e-72 276.6 171 83.6
arahy.Tifrunner.gnm1.ann1.ETD7FQ Arachis hypogaea HOM05D006253 ORTHO05D007666 1.7e-72 276.2 171 81.9
Ca_15796_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 2.9e-72 275.4 171 85.4
Ca_30406_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 2.9e-72 275.4 171 85.4
Glyma.04G194000 Glycine max HOM05D006253 ORTHO05D007666 2.9e-72 275.4 171 83.0
MD05G1080500 Malus domestica HOM05D006253 ORTHO05D007666 2.9e-72 275.4 173 83.2
Sc14g0002650 Simmondsia chinensis HOM05D006253 ORTHO05D007666 2.9e-72 275.4 171 81.9
Sed0027718 Sechium edule HOM05D006253 ORTHO05D007666 3.9e-72 275.0 171 81.9
MELO3C019508.2 Cucumis melo HOM05D006253 ORTHO05D007666 5.0e-72 274.6 171 82.5
CsaV3_3G018580 Cucumis sativus L. HOM05D006253 ORTHO05D007666 5.6e-71 271.2 171 81.3
Eucgr.I01155 Eucalyptus grandis HOM05D006253 ORTHO05D007666 5.6e-71 271.2 172 83.1
CANSAT25G0326 Cannabis sativa HOM05D006253 ORTHO05D007666 7.3e-71 270.8 171 81.3
Lalb_Chr25g0286231 Lupinus albus HOM05D006253 ORTHO05D007666 7.3e-71 270.8 171 80.1
Phvul.005G182700 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 9.5e-71 270.4 171 81.3
Rhsim05G0084000 Rhododendron simsii HOM05D006253 ORTHO05D007666 1.6e-70 269.6 180 78.9
Hma1.2p1_0370F.1_g137800 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 3.6e-70 268.5 171 80.7
CANSAT35G0887 Cannabis sativa HOM05D006253 ORTHO05D007666 6.1e-70 267.7 171 80.7
Ciclev10029390m.g Citrus clementina HOM05D006253 ORTHO05D007666 6.1e-70 267.7 172 81.4
arahy.Tifrunner.gnm1.ann1.AJN977 Arachis hypogaea HOM05D006253 ORTHO05D007666 1.8e-69 266.2 171 79.5
Lj5C209T13 Lonicera japonica HOM05D006253 ORTHO05D007666 3.1e-69 265.4 171 80.1
TPR.G19178 Trifolium pratense HOM05D006253 ORTHO05D007666 8.9e-69 263.8 169 81.1
TPR.G19494 Trifolium pratense HOM05D006253 ORTHO05D007666 8.9e-69 263.8 168 82.7
TWI79G0152 Tripterygium wilfordii HOM05D006253 ORTHO05D007666 2.0e-68 262.7 172 80.2
arahy.Tifrunner.gnm1.ann1.5N1458 Arachis hypogaea HOM05D006253 ORTHO05D007666 3.4e-68 261.9 192 72.9
Ca_01013_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 5.8e-68 261.2 166 80.1
Lsat_1_v5_gn_5_112681 Lactuca sativa HOM05D006253 ORTHO05D007666 5.8e-68 261.2 168 79.2
HanXRQChr16g0501301 Helianthus annuus HOM05D006253 ORTHO05D007666 7.5e-68 260.8 171 78.4
PGSC0003DMG400025894 Solanum tuberosum HOM05D006253 ORTHO05D007666 2.2e-67 259.2 171 79.5
SGA_v2.0_scaffold22G09667 Striga asiatica HOM05D006253 ORTHO05D007666 2.9e-67 258.8 171 77.2
MSTRG.27724 Avicennia marina HOM05D006253 ORTHO05D007666 4.9e-67 258.1 171 77.2
Sopen01g050480 Solanum pennellii HOM05D006253 ORTHO05D007666 4.9e-67 258.1 171 78.9
CAN.G1041.15 Capsicum annuum HOM05D006253 ORTHO05D007666 1.4e-66 256.5 171 77.8
EL10Ac5g11497 Beta vulgaris HOM05D006253 ORTHO05D007666 1.9e-66 256.1 171 76.0
Oeu010588.1 Olea europaea HOM05D006253 ORTHO05D007666 1.9e-66 256.1 171 78.4
PGR142G1116 Punica granatum HOM05D006253 ORTHO05D007666 1.9e-66 256.1 172 78.5
THA.LOC104807358 Tarenaya hassleriana HOM05D006253 ORTHO05D007666 5.4e-66 254.6 172 77.3
ECA234G4670 Erigeron canadensis HOM05D006253 ORTHO05D007666 1.2e-65 253.4 171 76.0
arahy.Tifrunner.gnm1.ann1.1E2X9I Arachis hypogaea HOM05D006253 ORTHO05D007666 2.3e-64 249.2 149 83.9
HPP92_001047 Vanilla planifolia HOM05D006253 ORTHO05D007666 3.9e-64 248.4 171 76.0
Medtr8g099835 Medicago truncatula HOM05D006253 ORTHO05D007666 5.0e-64 248.1 148 87.2
PSO782G1871 Papaver somniferum HOM05D006253 ORTHO05D007666 7.3e-63 244.2 167 76.0
Duzib052G0633 Durio zibethinus HOM05D006253 ORTHO05D007666 9.5e-63 243.8 143 86.0
AL7G16840 Arabidopsis lyrata HOM05D006253 ORTHO05D007666 1.6e-62 243.0 172 76.2
Os01g0142200 Oryza sativa ssp. japonica HOM05D006253 ORTHO05D007666 1.6e-62 243.0 172 76.2
Sp7g32200 Schrenkiella parvula HOM05D006253 ORTHO05D007666 3.6e-62 241.9 172 76.2
AT4G34412 Arabidopsis thaliana HOM05D006253 ORTHO05D007666 1.1e-61 240.4 172 75.0
Psat5g098280 Pisum sativum HOM05D006253 ORTHO05D007666 1.1e-61 240.4 143 85.3
Thhalv10026394m.g Eutrema salsugineum HOM05D006253 ORTHO05D007666 1.4e-61 240.0 172 74.4
CARHR242350 Cardamine hirsuta HOM05D006253 ORTHO05D007666 1.8e-61 239.6 172 74.4
BraA03t15367Z Brassica rapa HOM05D006253 ORTHO05D007666 4.0e-61 238.4 172 75.6
Zm00001eb124670 Zea mays HOM05D006253 ORTHO05D007666 4.0e-61 238.4 172 75.0
BcaNung06978 Brassica carinata HOM05D006253 ORTHO05D007666 1.2e-60 236.9 172 75.0
Carub.0007s0590 Capsella rubella HOM05D006253 ORTHO05D007666 1.2e-60 236.9 172 73.3
Aa31LG2G16330 Aethionema arabicum HOM05D006253 ORTHO05D007666 2.0e-60 236.1 172 73.3
C07p60590 Brassica napus HOM05D006253 ORTHO05D007666 2.0e-60 236.1 172 74.4
A01p04020 Brassica napus HOM05D006253 ORTHO05D007666 2.6e-60 235.7 172 75.0
Glyma.06G172100 Glycine max HOM05D006253 ORTHO05D007666 4.4e-60 235.0 143 83.2
Atru.chr5.2705 Acer truncatum HOM05D006253 ORTHO05D007666 1.1e-58 230.3 172 76.2
HanXRQChr10g0319791 Helianthus annuus HOM05D006253 ORTHO05D007666 7.1e-58 227.6 150 80.0
FAN20G2826 Fragaria x ananassa HOM05D006253 ORTHO05D007666 1.6e-57 226.5 171 71.9
CSS0003209 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 1.0e-56 223.8 142 81.7
Solyc01g108260.4 Solanum lycopersicum HOM05D006253 ORTHO05D007666 1.3e-56 223.4 148 79.1
DCAR_007862 Daucus carota HOM05D006253 ORTHO05D007666 2.3e-56 222.6 143 78.3
MBI02_g02992_MAGBIO Magnolia biondii HOM05D006253 ORTHO05D007666 2.3e-56 222.6 143 81.1
PSO478G4849 Papaver somniferum HOM05D006253 ORTHO05D007666 8.6e-56 220.7 143 81.8
Sed0021593 Sechium edule HOM05D006253 ORTHO05D007666 4.3e-55 218.4 171 67.3
CDE08G0295 Ceratophyllum demersum HOM05D006253 ORTHO05D007666 2.3e-53 212.6 143 76.9
BolC7t46489H Brassica oleracea HOM05D003825 ORTHO05D004491 6.8e-53 211.1 149 76.5
Hund00335 Selenicereus undatus HOM05D006253 ORTHO05D007666 8.9e-53 210.7 171 67.3
AagrBONN_evm.TU.Sc2ySwM_344.4457 Anthoceros agrestis HOM05D006253 ORTHO05D007666 3.7e-51 205.3 164 60.4
Mapoly0083s0082 Marchantia polymorpha HOM05D006253 ORTHO05D007666 1.1e-50 203.8 164 62.8
FAN15G3440 Fragaria x ananassa HOM05D006253 ORTHO05D007666 5.4e-50 201.4 171 66.7
Pp3c22_3990 Physcomitrium patens HOM05D006253 ORTHO05D007666 3.0e-48 195.7 164 59.8
SMO351G0094 Selaginella moellendorffii HOM05D006253 ORTHO05D007666 5.1e-48 194.9 164 62.8
CBR_g38557 Chara braunii HOM05D006253 ORTHO05D007666 3.8e-43 178.7 164 57.3
AUR62029937 Chenopodium quinoa HOM05D006253 ORTHO05D007666 6.4e-43 177.9 120 75.8
Phvul.002G266500 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 6.4e-43 177.9 110 80.9
CSS0033941 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 2.5e-39 166.0 138 71.0
SEGI_00233 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 1.3e-38 163.7 112 74.1
AUR62033746 Chenopodium quinoa HOM05D006253 ORTHO05D007666 6.2e-38 161.4 143 63.6
MD10G1094500 Malus domestica HOM05D006253 ORTHO05D007666 1.8e-37 159.8 101 80.2
BolC1t00422H Brassica oleracea HOM05D006253 ORTHO05D007666 4.0e-37 158.7 113 77.0
Medtr2g105210 Medicago truncatula HOM05D006253 ORTHO05D007666 4.0e-37 158.7 123 70.7
C01p04340 Brassica napus HOM05D006253 ORTHO05D007666 2.3e-32 142.9 99 77.8
vmacro19500 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 3.3e-31 139.0 163 54.6
Cc02_g18770 Coffea canephora HOM05D006253 ORTHO05D007666 3.4e-28 129.0 88 73.9
Prupe.4G258000 Prunus persica HOM05D006253 ORTHO05D007666 5.8e-28 128.3 98 69.4
vmacro06019 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 1.3e-27 127.1 94 71.3
Prupe.6G016400 Prunus persica HOM05D006253 ORTHO05D007666 3.8e-27 125.6 127 57.5
SalBow3G2580 Salvia bowleyana HOM05D006253 ORTHO05D007666 6.4e-27 124.8 119 59.7
A03p62890 Brassica napus HOM05D000211 ORTHO05D007666 1.4e-26 123.6 116 62.1
Gorai.005G238200 Gossypium raimondii HOM05D006253 ORTHO05D007666 2.4e-26 122.9 104 64.4
MCO10G211 Micromonas commoda HOM05D006253 ORTHO05D007666 4.2e-26 122.1 160 42.5
Ah.10g034240 Amaranthus hybridus HOM05D006253 ORTHO05D007666 9.3e-26 120.9 85 71.8
Cre01.g030950 Chlamydomonas reinhardtii HOM05D006253 ORTHO05D007666 5.1e-24 115.2 164 38.4
PRCOL_00001305 Prasinoderma coloniale HOM05D006253 ORTHO05D007666 5.6e-23 111.7 176 40.3
Sabra09G0078100 Salix brachista HOM05D006253 ORTHO05D007666 1.8e-21 106.7 85 72.9
Hma1.2p1_0804F.1_g221060 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 1.5e-20 103.6 71 74.6
Gohir.D02G210201 Gossypium hirsutum HOM05D006253 ORTHO05D007666 2.6e-20 102.8 104 58.7
ClCG05G009990 Citrullus lanatus HOM05D006253 ORTHO05D007666 8.4e-19 97.8 115 51.3
Oeu025576.2 Olea europaea HOM05D006253 ORTHO05D007666 6.2e-14 81.6 63 71.4
Aqoxy5G01240 Aquilegia oxysepala HOM05D006253 ORTHO05D007666 1.4e-13 80.5 57 64.9
Hma1.2p1_0674F.1_g201500 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 1.4e-13 80.5 57 73.7
Prupe.2G172700 Prunus persica HOM05D006253 ORTHO05D007666 2.4e-13 79.7 51 78.4
Prupe.4G259300 Prunus persica HOM05D006253 ORTHO05D007666 1.5e-12 77.0 85 52.9
Migut.N01188 Erythranthe guttata HOM05D006253 ORTHO05D007666 8.4e-11 71.2 54 66.7
Migut.N01189 Erythranthe guttata HOM05D006253 ORTHO05D007666 1.4e-10 70.5 47 76.6
SEGI_00525 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 3.5e-09 65.9 57 59.6
BolC1t00423H Brassica oleracea HOM05D000123 ORTHO05D009958 4.8e-06 55.5 37 75.7


User provided reference genes

Program Settings