Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p035444 Quercus lobata HOM05D006107 ORTHO05D007455 4.2e-95 351.3 170 100.0
QL11p035424 Quercus lobata HOM05D006107 ORTHO05D007455 1.8e-82 309.3 158 94.3
Cfa004529 Carpinus fangiana HOM05D006107 ORTHO05D007455 4.5e-81 304.7 158 91.1
CSS0002619 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 5.9e-81 304.3 158 92.4
CSS0005791 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 5.9e-81 304.3 158 92.4
GSVIVG01031728001 Vitis vinifera HOM05D006107 ORTHO05D007455 5.9e-81 304.3 158 92.4
Prupe.8G126800 Prunus persica HOM05D006107 ORTHO05D007455 2.2e-80 302.4 158 90.5
Lj4g0016203 Lotus japonicus HOM05D006107 ORTHO05D007455 2.9e-80 302.0 158 89.9
FAN24G1318 Fragaria x ananassa HOM05D006107 ORTHO05D007455 3.8e-80 301.6 158 90.5
Hma1.2p1_0474F.1_g160470 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 3.8e-80 301.6 158 91.1
Hma1.2p1_0474F.1_g160480 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 3.8e-80 301.6 158 91.1
Medtr4g085890 Medicago truncatula HOM05D006107 ORTHO05D007455 3.8e-80 301.6 158 89.2
TWI31G1484 Tripterygium wilfordii HOM05D006107 ORTHO05D007455 3.8e-80 301.6 158 90.5
Atru.chr5.2684 Acer truncatum HOM05D006107 ORTHO05D007455 5.0e-80 301.2 158 91.1
Cpa.g.sc62.2 Carica papaya HOM05D006107 ORTHO05D007455 6.5e-80 300.8 158 90.5
Ca_18695_v3 Cicer arietinum L. HOM05D006107 ORTHO05D007455 8.5e-80 300.4 158 88.6
FAN15G1599 Fragaria x ananassa HOM05D006107 ORTHO05D007455 8.5e-80 300.4 158 89.9
FAN20G2345 Fragaria x ananassa HOM05D006107 ORTHO05D007455 8.5e-80 300.4 158 89.9
Phvul.003G291600 Phaseolus vulgaris HOM05D006107 ORTHO05D007455 8.5e-80 300.4 158 89.2
Duzib132G0557 Durio zibethinus HOM05D006107 ORTHO05D007455 1.1e-79 300.1 158 89.9
FAN27G3033 Fragaria x ananassa HOM05D006107 ORTHO05D007455 1.1e-79 300.1 158 89.9
FvH4_2g05870 Fragaria vesca HOM05D006107 ORTHO05D007455 1.5e-79 299.7 158 89.9
Potri.009G100800 Populus trichocarpa HOM05D006107 ORTHO05D007455 1.5e-79 299.7 158 91.1
vmacro19505 Vaccinium macrocarpon HOM05D006107 ORTHO05D007455 1.5e-79 299.7 158 91.1
MD05G1082300 Malus domestica HOM05D006107 ORTHO05D007455 1.9e-79 299.3 158 89.2
PGR042G0079 Punica granatum HOM05D006107 ORTHO05D007455 1.9e-79 299.3 158 89.2
TPR.G12695 Trifolium pratense HOM05D006107 ORTHO05D007455 1.9e-79 299.3 158 88.0
arahy.Tifrunner.gnm1.ann1.Q9TTL4 Arachis hypogaea HOM05D006107 ORTHO05D007455 2.5e-79 298.9 158 89.9
Ciclev10028103m.g Citrus clementina HOM05D006107 ORTHO05D007455 2.5e-79 298.9 158 89.2
Sed0010263 Sechium edule HOM05D006107 ORTHO05D007455 2.5e-79 298.9 158 89.9
Glyma.07G213500 Glycine max HOM05D006107 ORTHO05D007455 3.2e-79 298.5 158 88.6
Psat7g125400 Pisum sativum HOM05D006107 ORTHO05D007455 3.2e-79 298.5 158 88.0
Sabra09G0076700 Salix brachista HOM05D006107 ORTHO05D007455 3.2e-79 298.5 158 90.5
Thecc.02G102000 Theobroma cacao HOM05D006107 ORTHO05D007455 3.2e-79 298.5 158 89.2
Rhsim05G0085900 Rhododendron simsii HOM05D006107 ORTHO05D007455 4.2e-79 298.1 158 90.5
VMungo0251G2128 Vigna mungo HOM05D006107 ORTHO05D007455 4.2e-79 298.1 158 88.0
Glyma.02G131500 Glycine max HOM05D006107 ORTHO05D007455 9.4e-79 297.0 158 88.6
Gohir.A12G023600 Gossypium hirsutum HOM05D006107 ORTHO05D007455 9.4e-79 297.0 158 88.0
Gohir.D12G024200 Gossypium hirsutum HOM05D006107 ORTHO05D007455 9.4e-79 297.0 158 88.0
Gorai.008G024600 Gossypium raimondii HOM05D006107 ORTHO05D007455 9.4e-79 297.0 158 88.0
Lalb_Chr16g0384781 Lupinus albus HOM05D006107 ORTHO05D007455 1.2e-78 296.6 158 87.3
RcHm_v2.0_Chr6g0257681 Rosa chinensis HOM05D006107 ORTHO05D007455 1.2e-78 296.6 158 88.0
Cc02_g18880 Coffea canephora HOM05D006107 ORTHO05D007455 1.6e-78 296.2 158 89.2
MELO3C018456.2 Cucumis melo HOM05D006107 ORTHO05D007455 1.6e-78 296.2 158 88.6
CsaV3_7G008530 Cucumis sativus L. HOM05D006107 ORTHO05D007455 1.6e-78 296.2 158 88.6
Lsat_1_v5_gn_7_86820 Lactuca sativa HOM05D006107 ORTHO05D007455 1.6e-78 296.2 158 87.3
Hund06173 Selenicereus undatus HOM05D006107 ORTHO05D007455 1.6e-78 296.2 158 88.0
CANSAT25G2960 Cannabis sativa HOM05D006107 ORTHO05D007455 2.1e-78 295.8 158 86.7
MBI03_g13479_MAGBIO Magnolia biondii HOM05D006107 ORTHO05D007455 2.1e-78 295.8 158 89.2
HPP92_004071 Vanilla planifolia HOM05D006107 ORTHO05D007455 2.1e-78 295.8 158 88.6
arahy.Tifrunner.gnm1.ann1.H5D5IL Arachis hypogaea HOM05D006107 ORTHO05D007455 2.7e-78 295.4 155 90.3
TAR376G0662 Trochodendron aralioides HOM05D006107 ORTHO05D007455 3.6e-78 295.0 158 89.9
ATR1126G046 Amborella trichopoda HOM05D006107 ORTHO05D007455 4.7e-78 294.7 158 88.0
Oeu007292.2 Olea europaea HOM05D006107 ORTHO05D007455 4.7e-78 294.7 158 86.7
EL10Ac1g02230 Beta vulgaris HOM05D006107 ORTHO05D007455 6.1e-78 294.3 158 87.3
CARHR242170 Cardamine hirsuta HOM05D006107 ORTHO05D007455 6.1e-78 294.3 158 85.4
AUR62035403 Chenopodium quinoa HOM05D006107 ORTHO05D007455 6.1e-78 294.3 158 86.7
ClCG02G006000 Citrullus lanatus HOM05D006107 ORTHO05D007455 6.1e-78 294.3 155 89.7
Migut.B00356 Erythranthe guttata HOM05D006107 ORTHO05D007455 6.1e-78 294.3 158 87.3
Eucgr.G01434 Eucalyptus grandis HOM05D006107 ORTHO05D007455 6.1e-78 294.3 158 87.3
SGA_v2.0_scaffold90G27632 Striga asiatica HOM05D006107 ORTHO05D007455 6.1e-78 294.3 158 87.3
AL7G17360 Arabidopsis lyrata HOM05D006107 ORTHO05D007455 8.0e-78 293.9 158 85.4
Aa31LG2G16450 Aethionema arabicum HOM05D006107 ORTHO05D007455 1.4e-77 293.1 158 85.4
AT4G34030 Arabidopsis thaliana HOM05D006107 ORTHO05D007455 1.4e-77 293.1 158 84.8
Thhalv10024753m.g Eutrema salsugineum HOM05D006107 ORTHO05D007455 1.4e-77 293.1 158 85.4
Nitab4.5_0001428g0130 Nicotiana tabacum HOM05D006107 ORTHO05D007455 1.4e-77 293.1 158 86.7
BcaB03g11861 Brassica carinata HOM05D006107 ORTHO05D007455 1.8e-77 292.7 158 84.8
THA.LOC104807265 Tarenaya hassleriana HOM05D006107 ORTHO05D007455 1.8e-77 292.7 158 86.1
BcaC01g00937 Brassica carinata HOM05D006107 ORTHO05D007455 2.3e-77 292.4 158 85.4
BolC3t20903H Brassica oleracea HOM05D006107 ORTHO05D007455 2.3e-77 292.4 158 85.4
Peaxi162Scf00016g01935 Petunia axillaris HOM05D006107 ORTHO05D007455 2.3e-77 292.4 158 87.3
Carub.0007s0637 Capsella rubella HOM05D006107 ORTHO05D007455 3.0e-77 292.0 158 84.2
Sc18g0004170 Simmondsia chinensis HOM05D006107 ORTHO05D007455 3.0e-77 292.0 158 86.1
A08p17180 Brassica napus HOM05D006107 ORTHO05D007455 4.0e-77 291.6 158 84.2
PSO541G4551 Papaver somniferum HOM05D006107 ORTHO05D007455 4.0e-77 291.6 158 87.3
PSO675G2583 Papaver somniferum HOM05D006107 ORTHO05D007455 4.0e-77 291.6 158 87.3
Aqoxy6G01306 Aquilegia oxysepala HOM05D006107 ORTHO05D007455 5.2e-77 291.2 158 86.7
C03p86150 Brassica napus HOM05D006107 ORTHO05D007455 5.2e-77 291.2 158 84.8
Sp7g31760 Schrenkiella parvula HOM05D006107 ORTHO05D007455 5.2e-77 291.2 158 84.2
CAN.G1041.37 Capsicum annuum HOM05D006107 ORTHO05D007455 8.8e-77 290.4 158 86.7
Nn5g30280 Nelumbo nucifera HOM05D006107 ORTHO05D007455 8.8e-77 290.4 158 88.0
Sopen01g050230 Solanum pennellii HOM05D006107 ORTHO05D007455 8.8e-77 290.4 158 86.7
PGSC0003DMG400025888 Solanum tuberosum HOM05D006107 ORTHO05D007455 8.8e-77 290.4 158 86.7
BraA08t33679Z Brassica rapa HOM05D006107 ORTHO05D007455 1.1e-76 290.0 158 83.5
Lj5A210T89 Lonicera japonica HOM05D006107 ORTHO05D007455 1.5e-76 289.7 158 85.4
BcaNung03357 Brassica carinata HOM05D006107 ORTHO05D007455 2.0e-76 289.3 158 84.2
C07p60130 Brassica napus HOM05D006107 ORTHO05D007455 2.0e-76 289.3 158 84.2
BolC7t46453H Brassica oleracea HOM05D006107 ORTHO05D007455 2.0e-76 289.3 158 84.2
AUR62041887 Chenopodium quinoa HOM05D006107 ORTHO05D007455 2.0e-76 289.3 155 86.5
SalBow6G1673 Salvia bowleyana HOM05D006107 ORTHO05D007455 2.0e-76 289.3 158 85.4
unitig_21.g20740 Utricularia gibba HOM05D006107 ORTHO05D007455 2.0e-76 289.3 158 86.1
A03p62570 Brassica napus HOM05D006107 ORTHO05D007455 4.4e-76 288.1 158 83.5
Zm00001eb179170 Zea mays HOM05D006107 ORTHO05D007455 4.4e-76 288.1 158 85.4
Haze_10087 Corylus avellana HOM05D006107 ORTHO05D007455 5.7e-76 287.7 150 90.7
ECA236G2832 Erigeron canadensis HOM05D006107 ORTHO05D007455 7.5e-76 287.3 158 85.4
RcHm_v2.0_Chr6g0257701 Rosa chinensis HOM05D006107 ORTHO05D007455 7.5e-76 287.3 158 86.1
SEGI_09747 Sequoiadendron giganteum HOM05D006107 ORTHO05D007455 1.3e-75 286.6 157 86.6
Solyc01g108030.4 Solanum lycopersicum HOM05D006107 ORTHO05D007455 1.3e-75 286.6 158 86.1
HanXRQChr11g0331361 Helianthus annuus HOM05D006107 ORTHO05D007455 2.8e-75 285.4 158 82.9
Nitab4.5_0018866g0010 Nicotiana tabacum HOM05D006107 ORTHO05D007455 3.7e-75 285.0 158 86.7
DCAR_001629 Daucus carota HOM05D006107 ORTHO05D007455 1.1e-74 283.5 158 82.9
Pp3c3_22750 Physcomitrium patens HOM05D006107 ORTHO05D007455 1.1e-74 283.5 158 85.4
Mapoly0009s0150 Marchantia polymorpha HOM05D006107 ORTHO05D007455 4.5e-73 278.1 158 83.5
SMO174G0062 Selaginella moellendorffii HOM05D006107 ORTHO05D007455 8.5e-72 273.9 158 81.6
AagrBONN_evm.TU.Sc2ySwM_368.3420 Anthoceros agrestis HOM05D006107 ORTHO05D007455 1.9e-71 272.7 158 81.0
CDE10G1185 Ceratophyllum demersum HOM05D006107 ORTHO05D007455 1.9e-71 272.7 159 82.4
HPP92_004116 Vanilla planifolia HOM05D006107 ORTHO05D007455 8.3e-67 257.3 169 74.0
COL.COLO4_32644 Corchorus olitorius HOM05D006107 ORTHO05D007455 4.5e-65 251.5 158 76.6
CiPaw.05G007100 Carya illinoinensis HOM05D006107 ORTHO05D007455 5.0e-64 248.1 130 91.5
Cre03.g181200 Chlamydomonas reinhardtii HOM05D006107 ORTHO05D007455 2.5e-63 245.7 159 73.6
Manes.07G078100 Manihot esculenta HOM05D006107 ORTHO05D007455 5.5e-63 244.6 130 90.0
Haze_26655 Corylus avellana HOM05D006107 ORTHO05D007455 1.7e-59 233.0 160 68.8
Dinv42164 Davidia involucrata HOM05D006107 ORTHO05D007455 4.5e-57 224.9 158 72.8
PRCOL_00006414 Prasinoderma coloniale HOM05D006107 ORTHO05D007455 1.7e-56 223.0 150 70.0
Haze_27116 Corylus avellana HOM05D006107 ORTHO05D007455 1.1e-55 220.3 157 66.2
Haze_27030 Corylus avellana HOM05D006107 ORTHO05D007455 9.2e-50 200.7 158 61.4
Actinidia17868 Actinidia chinensis HOM05D006107 ORTHO05D007455 2.1e-17 93.2 88 58.0
CBR_g54985 Chara braunii HOM05D006107 ORTHO05D007455 1.3e-14 84.0 144 34.7
Medtr3g011860 Medicago truncatula HOM05D006107 ORTHO05D007455 1.6e-09 67.0 45 73.3


User provided reference genes

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