Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p035429 Quercus lobata HOM05D006107 ORTHO05D007455 1.4e-40 169.1 80 100.0
QL11p035424 Quercus lobata HOM05D006107 ORTHO05D007455 1.8e-27 125.6 65 89.2
Haze_10087 Corylus avellana HOM05D006107 ORTHO05D007455 1.2e-12 76.3 77 58.4
vmacro19505 Vaccinium macrocarpon HOM05D006107 ORTHO05D007455 3.0e-11 71.6 77 55.8
Cpa.g.sc62.2 Carica papaya HOM05D006107 ORTHO05D007455 2.6e-10 68.6 68 55.9
FAN24G1318 Fragaria x ananassa HOM05D006107 ORTHO05D007455 2.6e-10 68.6 65 60.0
ClCG02G006000 Citrullus lanatus HOM05D006107 ORTHO05D007455 4.4e-10 67.8 75 50.7
Rhsim05G0085900 Rhododendron simsii HOM05D006107 ORTHO05D007455 7.5e-10 67.0 53 64.2
FvH4_2g05870 Fragaria vesca HOM05D006107 ORTHO05D007455 9.7e-10 66.6 65 58.5
Sabra09G0076700 Salix brachista HOM05D006107 ORTHO05D007455 9.7e-10 66.6 70 54.3
TAR376G0662 Trochodendron aralioides HOM05D006107 ORTHO05D007455 9.7e-10 66.6 68 58.8
Prupe.8G126800 Prunus persica HOM05D006107 ORTHO05D007455 1.3e-09 66.2 71 54.9
CSS0002619 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 2.8e-09 65.1 47 68.1
CSS0005791 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 2.8e-09 65.1 47 68.1
RcHm_v2.0_Chr6g0257681 Rosa chinensis HOM05D006107 ORTHO05D007455 1.1e-08 63.2 67 56.7
FAN20G2345 Fragaria x ananassa HOM05D006107 ORTHO05D007455 1.4e-08 62.8 67 53.7
Dinv42164 Davidia involucrata HOM05D006107 ORTHO05D007455 1.8e-08 62.4 68 50.0
FAN15G1599 Fragaria x ananassa HOM05D006107 ORTHO05D007455 1.8e-08 62.4 67 53.7
Potri.009G100800 Populus trichocarpa HOM05D006107 ORTHO05D007455 1.8e-08 62.4 70 51.4
CsaV3_7G008530 Cucumis sativus L. HOM05D006107 ORTHO05D007455 2.4e-08 62.0 73 46.6
Actinidia17868 Actinidia chinensis HOM05D006107 ORTHO05D007455 4.1e-08 61.2 48 64.6
Gohir.D12G024200 Gossypium hirsutum HOM05D006107 ORTHO05D007455 7.0e-08 60.5 73 46.6
Gorai.008G024600 Gossypium raimondii HOM05D006107 ORTHO05D007455 7.0e-08 60.5 73 45.2
Gohir.A12G023600 Gossypium hirsutum HOM05D006107 ORTHO05D007455 1.2e-07 59.7 73 45.2
MD05G1082300 Malus domestica HOM05D006107 ORTHO05D007455 1.6e-07 59.3 68 54.4
TWI31G1484 Tripterygium wilfordii HOM05D006107 ORTHO05D007455 1.6e-07 59.3 75 45.3
MELO3C018456.2 Cucumis melo HOM05D006107 ORTHO05D007455 2.0e-07 58.9 76 44.7
Hma1.2p1_0474F.1_g160470 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 2.0e-07 58.9 42 64.3
Hma1.2p1_0474F.1_g160480 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 2.0e-07 58.9 42 64.3
RcHm_v2.0_Chr6g0257701 Rosa chinensis HOM05D006107 ORTHO05D007455 2.7e-07 58.5 65 53.8
MBI03_g13479_MAGBIO Magnolia biondii HOM05D006107 ORTHO05D007455 5.9e-07 57.4 80 46.2
THA.LOC104807265 Tarenaya hassleriana HOM05D006107 ORTHO05D007455 5.9e-07 57.4 52 51.9
Oeu007292.2 Olea europaea HOM05D006107 ORTHO05D007455 1.0e-06 56.6 63 52.4
Thecc.02G102000 Theobroma cacao HOM05D006107 ORTHO05D007455 1.0e-06 56.6 71 45.1
Sopen01g050230 Solanum pennellii HOM05D006107 ORTHO05D007455 1.3e-06 56.2 34 73.5
arahy.Tifrunner.gnm1.ann1.H5D5IL Arachis hypogaea HOM05D006107 ORTHO05D007455 1.7e-06 55.8 68 45.6
Lalb_Chr16g0384781 Lupinus albus HOM05D006107 ORTHO05D007455 1.7e-06 55.8 75 44.0
SGA_v2.0_scaffold90G27632 Striga asiatica HOM05D006107 ORTHO05D007455 1.7e-06 55.8 70 47.1
Aqoxy6G01306 Aquilegia oxysepala HOM05D006107 ORTHO05D007455 2.9e-06 55.1 42 59.5
COL.COLO4_32644 Corchorus olitorius HOM05D006107 ORTHO05D007455 2.9e-06 55.1 77 44.2
Ciclev10028103m.g Citrus clementina HOM05D006107 ORTHO05D007455 3.8e-06 54.7 65 47.7
Duzib132G0557 Durio zibethinus HOM05D006107 ORTHO05D007455 5.0e-06 54.3 71 43.7
Nitab4.5_0018866g0010 Nicotiana tabacum HOM05D006107 ORTHO05D007455 5.0e-06 54.3 35 62.9
PGR042G0079 Punica granatum HOM05D006107 ORTHO05D007455 5.0e-06 54.3 70 47.1
Solyc01g108030.4 Solanum lycopersicum HOM05D006107 ORTHO05D007455 5.0e-06 54.3 34 70.6
Atru.chr5.2684 Acer truncatum HOM05D006107 ORTHO05D007455 8.5e-06 53.5 75 41.3
AUR62035403 Chenopodium quinoa HOM05D006107 ORTHO05D007455 8.5e-06 53.5 58 44.8
Eucgr.G01434 Eucalyptus grandis HOM05D006107 ORTHO05D007455 8.5e-06 53.5 78 46.2


User provided reference genes

Program Settings