Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p034921 Quercus lobata HOM05D016036 ORTHO05D016254 7.3e-85 317.0 142 100.0
QL09p042447 Quercus lobata HOM05D016036 ORTHO05D016254 7.6e-66 253.8 142 78.2
QL09p035941 Quercus lobata HOM05D016036 ORTHO05D016254 3.3e-37 158.7 116 58.6
QL05p015875 Quercus lobata HOM05D000003 ORTHO05D000004 2.5e-32 142.5 142 44.4
QL08p061842 Quercus lobata HOM05D000003 ORTHO05D000004 4.8e-28 128.3 141 40.4
QL02p092030 Quercus lobata HOM05D000003 ORTHO05D000022 1.5e-24 116.7 96 51.0
COL.COLO4_01156 Corchorus olitorius HOM05D000003 ORTHO05D000004 4.2e-24 115.2 135 39.3
QL01p007248 Quercus lobata HOM05D000003 ORTHO05D000022 4.0e-22 108.6 109 44.0
COL.COLO4_21945 Corchorus olitorius HOM05D016036 ORTHO05D016254 1.3e-20 103.6 136 38.2
QL01p022100 Quercus lobata HOM05D000003 ORTHO05D000004 7.0e-19 97.8 137 32.8
QL08p045436 Quercus lobata HOM05D016036 ORTHO05D016254 3.3e-16 89.0 96 40.6
COL.COLO4_35381 Corchorus olitorius HOM05D016036 ORTHO05D016254 7.2e-16 87.8 126 30.2
QL09p044651 Quercus lobata HOM05D014996 ORTHO05D016254 2.1e-15 86.3 146 30.1
QL08p019214 Quercus lobata HOM05D016036 ORTHO05D000022 3.6e-15 85.5 86 45.3
QL07p009746 Quercus lobata HOM05D016036 ORTHO05D016254 2.3e-14 82.8 128 32.8
CAN.G490.36 Capsicum annuum HOM05D000541 ORTHO05D000137 1.2e-13 80.5 141 29.1
AUR62039453 Chenopodium quinoa HOM05D000003 ORTHO05D000004 1.5e-13 80.1 138 29.0
COL.COLO4_33843 Corchorus olitorius HOM05D000003 ORTHO05D000004 3.1e-11 72.4 131 31.3
Atru.chr6.1397 Acer truncatum HOM05D000003 ORTHO05D000022 5.4e-11 71.6 135 28.9
COL.COLO4_20501 Corchorus olitorius HOM05D000003 ORTHO05D000004 1.2e-10 70.5 139 29.5
QL07p011071 Quercus lobata HOM05D000151 ORTHO05D000074 2.0e-10 69.7 97 32.0
QL12p025692 Quercus lobata HOM05D014996 ORTHO05D000022 2.7e-10 69.3 66 43.9
Atru.chr2.1761 Acer truncatum HOM05D000003 ORTHO05D000004 4.5e-10 68.6 136 27.2
Atru.chr4.136 Acer truncatum HOM05D000003 ORTHO05D000022 5.9e-10 68.2 135 26.7
FvH4_6g46881 Fragaria vesca HOM05D000003 ORTHO05D000022 1.0e-09 67.4 134 29.9
QL03p021186 Quercus lobata HOM05D000003 ORTHO05D016254 5.0e-09 65.1 103 35.9
Atru.chr1.1905 Acer truncatum HOM05D000003 ORTHO05D000022 8.6e-09 64.3 132 26.5
QL12p023424 Quercus lobata HOM05D002663 ORTHO05D002988 1.5e-08 63.5 70 38.6
Atru.chr1.1336 Acer truncatum HOM05D000003 ORTHO05D000022 1.9e-08 63.2 135 25.9
Atru.chr10.629 Acer truncatum HOM05D000003 ORTHO05D000004 4.3e-08 62.0 143 24.5
FvH4_1g19471 Fragaria vesca HOM05D000003 ORTHO05D000004 4.3e-08 62.0 143 28.0
MBI04_g10398_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.3e-08 62.0 134 32.1
COL.COLO4_36959 Corchorus olitorius HOM05D000003 ORTHO05D000004 5.6e-08 61.6 103 33.0
Atru.chr10.81 Acer truncatum HOM05D000003 ORTHO05D000004 7.3e-08 61.2 136 27.9
Atru.chr3.2067 Acer truncatum HOM05D000003 ORTHO05D000022 7.3e-08 61.2 133 27.1
FvH4_6g25500 Fragaria vesca HOM05D000003 ORTHO05D000007 7.3e-08 61.2 90 31.1
MBI15_g44988_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.3e-08 61.2 123 29.3
PSO339G4032 Papaver somniferum HOM05D000003 ORTHO05D000004 7.3e-08 61.2 137 28.5
PGSC0003DMG400021434 Solanum tuberosum HOM05D001426 ORTHO05D000022 7.3e-08 61.2 130 30.8
BcaB04g17941 Brassica carinata HOM05D000003 ORTHO05D000004 9.5e-08 60.8 148 28.4
AUR62014610 Chenopodium quinoa HOM05D000003 ORTHO05D011948 9.5e-08 60.8 144 29.9
PSO170G6243 Papaver somniferum HOM05D000003 ORTHO05D000004 9.5e-08 60.8 142 24.6
Atru.chr1.3365 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-07 60.5 135 25.2
Aa31LG2G16390 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.2e-07 60.5 150 28.0
BolC4t27637H Brassica oleracea HOM05D000003 ORTHO05D000925 1.2e-07 60.5 146 28.8
FvH4_3g33091 Fragaria vesca HOM05D000003 ORTHO05D000022 1.2e-07 60.5 96 31.2
Atru.chr6.2848 Acer truncatum HOM05D000003 ORTHO05D000022 1.6e-07 60.1 134 28.4
Aa31sc314G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.6e-07 60.1 158 27.8
PSO541G3861 Papaver somniferum HOM05D000003 ORTHO05D000004 1.6e-07 60.1 149 28.2
Atru.chr11.757 Acer truncatum HOM05D000003 ORTHO05D000004 2.1e-07 59.7 135 24.4
Rhsim06G0091800 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.8e-07 59.3 116 31.0
Aa31csc275G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.6e-07 58.9 153 27.5
PSO210G6978 Papaver somniferum HOM05D000003 ORTHO05D001026 3.6e-07 58.9 101 35.6
Atru.chr2.971 Acer truncatum HOM05D000003 ORTHO05D000022 4.7e-07 58.5 106 25.5
QL04p025475 Quercus lobata HOM05D000003 ORTHO05D000004 4.7e-07 58.5 97 26.8
BcaB03g16558 Brassica carinata HOM05D000003 ORTHO05D000006 6.1e-07 58.2 113 29.2
RcHm_v2.0_Chr7g0236061 Rosa chinensis HOM05D000003 ORTHO05D000004 6.1e-07 58.2 142 31.7
AUR62005088 Chenopodium quinoa HOM05D000157 ORTHO05D020420 8.0e-07 57.8 139 27.3
Lj4g0004660 Lotus japonicus HOM05D000003 ORTHO05D000004 1.4e-06 57.0 153 26.8
RcHm_v2.0_Chr6g0249781 Rosa chinensis HOM05D000003 ORTHO05D000004 1.4e-06 57.0 153 24.8
BcaB07g31656 Brassica carinata HOM05D000003 ORTHO05D000925 1.8e-06 56.6 148 25.0
Sp7g02710 Schrenkiella parvula HOM05D000003 ORTHO05D000925 1.8e-06 56.6 134 27.6
BcaC07g38785 Brassica carinata HOM05D000003 ORTHO05D000925 2.3e-06 56.2 115 28.7
TWI38G0333 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.3e-06 56.2 140 26.4
Aa31LG8G16480 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.0e-06 55.8 145 25.5
MBI18_g42766_MAGBIO Magnolia biondii HOM05D000013 ORTHO05D000071 3.0e-06 55.8 135 28.1
PSO832G4066 Papaver somniferum HOM05D000003 ORTHO05D000004 3.0e-06 55.8 102 32.4
Atru.chr2.2049 Acer truncatum HOM05D000003 ORTHO05D000004 6.8e-06 54.7 137 27.0
PSO675G2188 Papaver somniferum HOM05D000003 ORTHO05D000004 6.8e-06 54.7 141 27.0
Rhsim11G0140100 Rhododendron simsii HOM05D000003 ORTHO05D000004 6.8e-06 54.7 88 35.2
PSO302G0310 Papaver somniferum HOM05D000003 ORTHO05D000004 8.9e-06 54.3 137 28.5
SGA_v2.0_scaffold279G46783 Striga asiatica HOM05D005209 ORTHO05D006188 8.9e-06 54.3 113 31.0


User provided reference genes

Program Settings