Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p033993 Quercus lobata HOM05D005827 ORTHO05D005864 1.5e-70 269.6 155 100.0
QL11p034047 Quercus lobata HOM05D005827 ORTHO05D005864 7.0e-65 250.8 152 95.4
CiPaw.06G170100 Carya illinoinensis HOM05D005827 ORTHO05D005864 6.4e-50 201.1 153 70.6
Duzib132G0170 Durio zibethinus HOM05D005827 ORTHO05D005864 6.6e-47 191.0 152 68.4
Haze_10160 Corylus avellana HOM05D005827 ORTHO05D005864 1.4e-44 183.3 144 75.0
Manes.10G074300 Manihot esculenta HOM05D005827 ORTHO05D005864 1.4e-44 183.3 152 64.5
Prupe.1G568500 Prunus persica HOM05D005827 ORTHO05D005864 2.6e-43 179.1 154 64.3
Thecc.02G106700 Theobroma cacao HOM05D005827 ORTHO05D005864 3.4e-43 178.7 127 73.2
Potri.009G097000 Populus trichocarpa HOM05D005827 ORTHO05D005864 1.7e-42 176.4 152 64.5
Dinv15756 Davidia involucrata HOM05D005827 ORTHO05D005864 2.2e-42 176.0 152 64.5
Gorai.005G235500 Gossypium raimondii HOM05D005827 ORTHO05D005864 4.9e-42 174.9 152 72.4
COL.COLO4_32605 Corchorus olitorius HOM05D005827 ORTHO05D005864 1.1e-41 173.7 158 69.6
Atru.chr5.2579 Acer truncatum HOM05D005827 ORTHO05D005864 3.2e-41 172.2 151 68.9
Gohir.A03G186800 Gossypium hirsutum HOM05D005827 ORTHO05D005864 9.3e-41 170.6 152 70.4
Hma1.2p1_0796F.1_g219120 Hydrangea macrophylla HOM05D005827 ORTHO05D005864 9.3e-41 170.6 152 64.5
CSS0006486 Camellia sinensis var. sinensis HOM05D005827 ORTHO05D005864 1.2e-40 170.2 151 63.6
Rhsim11G0160600 Rhododendron simsii HOM05D005827 ORTHO05D005864 1.2e-40 170.2 150 62.0
MD15G1423200 Malus domestica HOM05D005827 ORTHO05D005864 3.5e-40 168.7 154 66.2
Gohir.D02G207600 Gossypium hirsutum HOM05D005827 ORTHO05D005864 1.0e-39 167.2 152 71.1
THA.LOC104823732 Tarenaya hassleriana HOM05D005827 ORTHO05D005864 1.0e-39 167.2 153 58.2
CANSAT11G0172 Cannabis sativa HOM05D005827 ORTHO05D005864 3.9e-39 165.2 126 71.4
RcHm_v2.0_Chr7g0222441 Rosa chinensis HOM05D005827 ORTHO05D005864 5.1e-39 164.9 125 69.6
FAN08G1793 Fragaria x ananassa HOM05D005827 ORTHO05D005864 2.5e-38 162.5 160 67.5
CAN.G517.16 Capsicum annuum HOM05D005827 ORTHO05D005864 3.3e-38 162.2 152 59.2
Eucgr.G01363 Eucalyptus grandis HOM05D005827 ORTHO05D005864 3.3e-38 162.2 152 61.8
Sopen12g028550 Solanum pennellii HOM05D005827 ORTHO05D005864 4.3e-38 161.8 152 59.9
Solyc12g056030.2 Solanum lycopersicum HOM05D005827 ORTHO05D005864 7.3e-38 161.0 152 59.9
vmacro14445 Vaccinium macrocarpon HOM05D005827 ORTHO05D005864 7.3e-38 161.0 152 61.8
QL11p034007 Quercus lobata HOM05D005827 ORTHO05D005864 1.3e-37 160.2 102 92.2
TAR625G0497 Trochodendron aralioides HOM05D005827 ORTHO05D005864 1.3e-37 160.2 128 65.6
TAR625G1254 Trochodendron aralioides HOM05D005827 ORTHO05D005864 1.3e-37 160.2 128 65.6
Cc02_g19170 Coffea canephora HOM05D005827 ORTHO05D005864 2.8e-37 159.1 148 64.2
FAN18G4374 Fragaria x ananassa HOM05D005827 ORTHO05D005864 2.8e-37 159.1 161 65.8
Nitab4.5_0000209g0220 Nicotiana tabacum HOM05D005827 ORTHO05D005864 2.8e-37 159.1 152 57.9
Sabra09G0074600 Salix brachista HOM05D005827 ORTHO05D005864 3.6e-37 158.7 152 59.9
FAN13G0291 Fragaria x ananassa HOM05D005827 ORTHO05D005864 4.8e-37 158.3 161 64.6
Sabra09G0074500 Salix brachista HOM05D005827 ORTHO05D005864 4.8e-37 158.3 187 51.9
PGSC0003DMG400005012 Solanum tuberosum HOM05D005827 ORTHO05D005864 4.8e-37 158.3 152 58.6
Peaxi162Scf00880g00322 Petunia axillaris HOM05D005827 ORTHO05D005864 6.2e-37 157.9 152 60.5
GSVIVG01003168001 Vitis vinifera HOM05D005827 ORTHO05D005864 8.1e-37 157.5 155 66.5
Cpa.g.sc246.10 Carica papaya HOM05D005827 ORTHO05D005864 1.4e-36 156.8 149 61.1
DCAR_029081 Daucus carota HOM05D005827 ORTHO05D005864 3.1e-36 155.6 152 61.8
Nitab4.5_0011210g0030 Nicotiana tabacum HOM05D000771 ORTHO05D005864 3.1e-36 155.6 152 57.2
A02p32240 Brassica napus HOM05D005827 ORTHO05D005864 6.9e-36 154.5 125 62.4
BolC2t11063H Brassica oleracea HOM05D005827 ORTHO05D005864 6.9e-36 154.5 125 62.4
BraA02t08240Z Brassica rapa HOM05D005827 ORTHO05D005864 6.9e-36 154.5 125 62.4
FAN04G0262 Fragaria x ananassa HOM05D005827 ORTHO05D005864 6.9e-36 154.5 126 64.3
MD08G1229200 Malus domestica HOM05D005827 ORTHO05D005864 6.9e-36 154.5 133 65.4
BcaC03g17064 Brassica carinata HOM05D005827 ORTHO05D005864 9.0e-36 154.1 125 62.4
FvH4_5g29540 Fragaria vesca HOM05D005827 ORTHO05D005864 9.0e-36 154.1 161 64.6
BcaB07g30381 Brassica carinata HOM05D005827 ORTHO05D005864 2.6e-35 152.5 125 61.6
C02p49840 Brassica napus HOM05D005827 ORTHO05D005864 3.4e-35 152.1 125 61.6
Sp2g13090 Schrenkiella parvula HOM05D005827 ORTHO05D005864 4.5e-35 151.8 143 55.2
Nn1g04717 Nelumbo nucifera HOM05D005827 ORTHO05D005864 5.8e-35 151.4 124 64.5
Carub.0005s0059 Capsella rubella HOM05D005827 ORTHO05D005864 3.8e-34 148.7 143 54.5
AT2G01640 Arabidopsis thaliana HOM05D005827 ORTHO05D005864 1.9e-33 146.4 123 61.0
Nitab4.5_0001647g0080 Nicotiana tabacum HOM05D005827 ORTHO05D005864 3.2e-33 145.6 127 61.4
EL10Ac9g22299 Beta vulgaris HOM05D005827 ORTHO05D005864 4.2e-33 145.2 156 53.8
AL5G10740 Arabidopsis lyrata HOM05D005827 ORTHO05D005864 7.1e-33 144.4 118 62.7
Lj9A321T79 Lonicera japonica HOM05D005827 ORTHO05D005864 2.1e-32 142.9 187 48.1
PGR042G1992 Punica granatum HOM05D005827 ORTHO05D005864 3.5e-32 142.1 127 59.8
Thhalv10005665m.g Eutrema salsugineum HOM05D005827 ORTHO05D005864 6.0e-32 141.4 173 47.4
ECA234G2840 Erigeron canadensis HOM05D005827 ORTHO05D005864 1.8e-31 139.8 124 62.1
Ca_30413_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 3.9e-31 138.7 154 53.2
Sc08g0001470 Simmondsia chinensis HOM05D005827 ORTHO05D005864 3.9e-31 138.7 127 57.5
Sed0003004 Sechium edule HOM05D005827 ORTHO05D005864 6.7e-31 137.9 152 53.9
HanXRQChr16g0514881 Helianthus annuus HOM05D005827 ORTHO05D005864 8.7e-31 137.5 152 53.9
Eucgr.H03226 Eucalyptus grandis HOM05D005827 ORTHO05D005864 1.1e-30 137.1 110 66.4
AUR62010278 Chenopodium quinoa HOM05D005827 ORTHO05D005864 1.5e-30 136.7 128 56.2
PSO170G4182 Papaver somniferum HOM05D005827 ORTHO05D005864 1.5e-30 136.7 152 52.6
Ciclev10030223m.g Citrus clementina HOM05D005827 ORTHO05D005864 2.5e-30 136.0 115 67.8
TWI31G0230 Tripterygium wilfordii HOM05D005827 ORTHO05D005864 2.5e-30 136.0 114 68.4
ClCG04G002790 Citrullus lanatus HOM05D005827 ORTHO05D005864 3.3e-30 135.6 149 53.7
Lalb_Chr21g0308391 Lupinus albus HOM05D005827 ORTHO05D005864 1.6e-29 133.3 153 50.3
Lsat_1_v5_gn_5_114720 Lactuca sativa HOM05D005827 ORTHO05D005864 2.1e-29 132.9 126 60.3
Aqoxy5G03364 Aquilegia oxysepala HOM05D005827 ORTHO05D005864 4.8e-29 131.7 150 52.0
Aa31LG2G8260 Aethionema arabicum HOM05D005827 ORTHO05D005864 1.4e-28 130.2 121 55.4
MSTRG.27741 Avicennia marina HOM05D005827 ORTHO05D005864 3.1e-28 129.0 125 55.2
PSO210G1068 Papaver somniferum HOM05D005827 ORTHO05D005864 3.1e-28 129.0 152 52.0
CsaV3_4G029930 Cucumis sativus L. HOM05D005827 ORTHO05D005864 4.0e-28 128.6 154 55.2
TAR381G1673 Trochodendron aralioides HOM05D005827 ORTHO05D005864 5.3e-28 128.3 133 63.2
Ca_06388_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 9.0e-28 127.5 125 56.8
Migut.N01172 Erythranthe guttata HOM05D005827 ORTHO05D005864 5.8e-27 124.8 152 54.6
Hund00127 Selenicereus undatus HOM05D005827 ORTHO05D005864 2.2e-26 122.9 101 66.3
Glyma.12G113700 Glycine max HOM05D005827 ORTHO05D005864 6.5e-26 121.3 152 50.0
CDE01G0172 Ceratophyllum demersum HOM05D005827 ORTHO05D005864 1.1e-25 120.6 144 50.7
arahy.Tifrunner.gnm1.ann1.M92LVR Arachis hypogaea HOM05D005827 ORTHO05D005864 1.9e-25 119.8 150 50.7
Hund00128 Selenicereus undatus HOM05D005827 ORTHO05D005864 3.2e-25 119.0 101 65.3
HPP92_026144 Vanilla planifolia HOM05D005827 ORTHO05D005864 3.2e-25 119.0 127 50.4
Actinidia00415 Actinidia chinensis HOM05D005827 ORTHO05D005864 5.5e-25 118.2 96 67.7
arahy.Tifrunner.gnm1.ann1.HL4A43 Arachis hypogaea HOM05D005827 ORTHO05D005864 5.5e-25 118.2 127 54.3
Os12g0244500 Oryza sativa ssp. japonica HOM05D005827 ORTHO05D005864 1.2e-24 117.1 114 58.8
Phvul.007G038800 Phaseolus vulgaris HOM05D005827 ORTHO05D005864 2.1e-24 116.3 154 47.4
SalBow3G3341 Salvia bowleyana HOM05D005827 ORTHO05D005864 4.6e-24 115.2 160 46.9
SGA_v2.0_scaffold42G16001 Striga asiatica HOM05D005827 ORTHO05D005864 6.0e-24 114.8 154 47.4
Zm00001eb133530 Zea mays HOM05D005827 ORTHO05D005864 1.0e-23 114.0 147 48.3
MELO3C003274.2 Cucumis melo HOM05D005827 ORTHO05D005864 2.3e-23 112.8 133 51.1
SGA_v2.0_scaffold393G50707 Striga asiatica HOM05D005827 ORTHO05D005864 2.5e-22 109.4 155 44.5
Glyma.20G127400 Glycine max HOM05D005827 ORTHO05D005864 9.6e-22 107.5 152 50.0
ATR0827G109 Amborella trichopoda HOM05D005827 ORTHO05D005864 2.1e-21 106.3 101 53.5
Psat6g219720 Pisum sativum HOM05D005827 ORTHO05D005864 2.0e-19 99.8 158 42.4
Aa31sc215G30 Aethionema arabicum HOM05D005827 ORTHO05D005864 2.6e-19 99.4 115 46.1
Lj5g0000760 Lotus japonicus HOM05D005827 ORTHO05D005864 6.5e-18 94.7 108 50.9
CiPaw.07G088900 Carya illinoinensis HOM05D005827 ORTHO05D005864 8.4e-18 94.4 85 67.1
Nn2g12688 Nelumbo nucifera HOM05D005827 ORTHO05D005864 1.1e-17 94.0 84 59.5
MELO3C033554.2 Cucumis melo HOM05D005827 ORTHO05D005864 2.5e-17 92.8 101 52.5
Lj3g0023632 Lotus japonicus HOM05D005827 ORTHO05D005864 3.2e-17 92.4 108 49.1
MD05G1087800 Malus domestica HOM05D005827 ORTHO05D005864 3.2e-17 92.4 116 48.3
unitig_94.g28296 Utricularia gibba HOM05D005827 ORTHO05D005864 4.6e-16 88.6 129 41.9
unitig_94.g28309 Utricularia gibba HOM05D005827 ORTHO05D005864 4.6e-16 88.6 129 41.9
AUR62039111 Chenopodium quinoa HOM05D005827 ORTHO05D005864 2.3e-15 86.3 88 51.1
ATR0691G195 Amborella trichopoda HOM05D005827 ORTHO05D005864 8.7e-15 84.3 78 52.6
AUR62044681 Chenopodium quinoa HOM05D005827 ORTHO05D005864 1.1e-14 84.0 78 53.8
TPR.G13876 Trifolium pratense HOM05D005827 ORTHO05D005864 1.9e-14 83.2 111 45.0
Medtr1g107495 Medicago truncatula HOM05D005827 ORTHO05D005864 7.4e-14 81.3 76 52.6
Zm00001eb207600 Zea mays HOM05D005827 ORTHO05D005864 7.4e-14 81.3 85 55.3
Zm00001eb350190 Zea mays HOM05D005827 ORTHO05D005864 1.3e-13 80.5 84 56.0
Zm00001eb324360 Zea mays HOM05D005827 ORTHO05D005864 2.8e-13 79.3 95 49.5
CANSAT25G3357 Cannabis sativa HOM05D005827 ORTHO05D005864 4.8e-13 78.6 53 71.7
Zm00001eb006370 Zea mays HOM05D005827 ORTHO05D005864 4.8e-13 78.6 85 54.1
Zm00001eb259520 Zea mays HOM05D005827 ORTHO05D005864 2.4e-12 76.3 85 52.9
SMO364G0308 Selaginella moellendorffii HOM05D005827 ORTHO05D000003 4.1e-12 75.5 115 38.3
Zm00001eb324920 Zea mays HOM05D005827 ORTHO05D005864 9.0e-12 74.3 84 53.6
SEGI_38856 Sequoiadendron giganteum HOM05D005827 ORTHO05D005864 1.5e-11 73.6 140 35.0
SMO364G0554 Selaginella moellendorffii HOM05D005827 ORTHO05D005864 2.0e-11 73.2 115 37.4
Zm00001eb091410 Zea mays HOM05D005827 ORTHO05D005864 5.9e-11 71.6 93 47.3
Mapoly0052s0016 Marchantia polymorpha HOM05D005827 ORTHO05D005864 2.5e-09 66.2 117 40.2
Pp3c21_2370 Physcomitrium patens HOM05D005827 ORTHO05D005864 7.2e-09 64.7 110 38.2
Ah.01g018070 Amaranthus hybridus HOM05D007150 ORTHO05D008994 1.0e-07 60.8 39 69.2
AagrBONN_evm.TU.Sc2ySwM_228.4380 Anthoceros agrestis HOM05D005827 ORTHO05D005864 1.8e-07 60.1 97 40.2


User provided reference genes

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