Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p032854 Quercus lobata HOM05D007211 ORTHO05D009060 1.7e-41 172.2 82 100.0
Haze_10197 Corylus avellana HOM05D007211 ORTHO05D009060 3.3e-37 157.9 81 91.4
ClCG05G010330 Citrullus lanatus HOM05D007211 ORTHO05D009060 1.1e-35 152.9 81 86.4
MELO3C019551.2 Cucumis melo HOM05D007211 ORTHO05D009060 1.1e-35 152.9 81 87.7
CiPaw.06G168700 Carya illinoinensis HOM05D007211 ORTHO05D009060 3.1e-35 151.4 80 87.5
CsaV3_3G018160 Cucumis sativus L. HOM05D007211 ORTHO05D009060 6.9e-35 150.2 81 85.2
Gohir.A13G044300 Gossypium hirsutum HOM05D007211 ORTHO05D009060 2.0e-34 148.7 81 85.2
Eucgr.I01095 Eucalyptus grandis HOM05D007211 ORTHO05D009060 1.3e-33 146.0 80 85.0
CANSAT25G1462 Cannabis sativa HOM05D007211 ORTHO05D009060 2.2e-33 145.2 81 82.7
CANSAT25G3598 Cannabis sativa HOM05D007211 ORTHO05D009060 2.2e-33 145.2 81 82.7
Thecc.02G110400 Theobroma cacao HOM05D007211 ORTHO05D009060 2.2e-33 145.2 80 83.8
Gorai.013G048100 Gossypium raimondii HOM05D007211 ORTHO05D009060 3.8e-33 144.4 80 83.8
PGR142G3039 Punica granatum HOM05D007211 ORTHO05D009060 3.8e-33 144.4 81 82.7
Gohir.D13G043400 Gossypium hirsutum HOM05D007211 ORTHO05D009060 4.9e-33 144.1 80 83.8
Sed0014592 Sechium edule HOM05D007211 ORTHO05D009060 4.9e-33 144.1 80 80.0
Ciclev10029710m.g Citrus clementina HOM05D007211 ORTHO05D009060 6.4e-33 143.7 80 81.2
Duzib248G0207 Durio zibethinus HOM05D007211 ORTHO05D009060 6.4e-33 143.7 81 81.5
COL.COLO4_32576 Corchorus olitorius HOM05D007211 ORTHO05D009060 1.4e-32 142.5 81 80.2
Lsat_1_v5_gn_9_112060 Lactuca sativa HOM05D007211 ORTHO05D009060 4.2e-32 141.0 80 81.2
Prupe.8G136900 Prunus persica HOM05D007211 ORTHO05D009060 4.2e-32 141.0 80 81.2
Atru.chr5.2471 Acer truncatum HOM05D007211 ORTHO05D009060 5.4e-32 140.6 80 81.2
Manes.10G075811 Manihot esculenta HOM05D007211 ORTHO05D009060 7.1e-32 140.2 80 81.2
Manes.10G076037 Manihot esculenta HOM05D007211 ORTHO05D009060 7.1e-32 140.2 80 81.2
Cpa.g.sc106.108 Carica papaya HOM05D007211 ORTHO05D009060 9.3e-32 139.8 81 79.0
Sabra09G0072500 Salix brachista HOM05D007211 ORTHO05D009060 9.3e-32 139.8 80 81.2
MD00G1109400 Malus domestica HOM05D007211 ORTHO05D009060 1.2e-31 139.4 80 80.0
MD04G1005100 Malus domestica HOM05D007211 ORTHO05D009060 1.2e-31 139.4 80 80.0
GSVIVG01037902001 Vitis vinifera HOM05D007211 ORTHO05D009060 1.2e-31 139.4 80 80.0
Potri.001G299200 Populus trichocarpa HOM05D007211 ORTHO05D009060 1.6e-31 139.0 80 80.0
Nn1g04662 Nelumbo nucifera HOM05D007211 ORTHO05D009060 3.5e-31 137.9 80 78.8
Potri.009G094200 Populus trichocarpa HOM05D007211 ORTHO05D009060 6.0e-31 137.1 80 80.0
Oeu013758.1 Olea europaea HOM05D007211 ORTHO05D009060 3.0e-30 134.8 80 77.5
HanXRQChr03g0068751 Helianthus annuus HOM05D007211 ORTHO05D009060 3.9e-30 134.4 80 78.8
Sc14g0001880 Simmondsia chinensis HOM05D007211 ORTHO05D009060 5.1e-30 134.0 80 75.0
Actinidia34396 Actinidia chinensis HOM05D007211 ORTHO05D009060 8.7e-30 133.3 80 76.2
Aqoxy6G02839 Aquilegia oxysepala HOM05D007211 ORTHO05D009060 8.7e-30 133.3 80 77.5
CSS0010427 Camellia sinensis var. sinensis HOM05D007211 ORTHO05D009060 8.7e-30 133.3 80 75.0
CSS0021869 Camellia sinensis var. sinensis HOM05D007211 ORTHO05D009060 8.7e-30 133.3 80 75.0
Hund00155 Selenicereus undatus HOM05D000364 ORTHO05D009060 8.7e-30 133.3 80 73.8
TWI79G1551 Tripterygium wilfordii HOM05D007211 ORTHO05D009060 8.7e-30 133.3 80 72.5
Rhsim11G0158600 Rhododendron simsii HOM05D007211 ORTHO05D009060 1.1e-29 132.9 80 76.2
vmacro01995 Vaccinium macrocarpon HOM05D007211 ORTHO05D009060 1.1e-29 132.9 80 76.2
Hma1.2p1_1518F.1_g288450 Hydrangea macrophylla HOM05D007211 ORTHO05D009060 1.5e-29 132.5 80 77.5
Lj1g0022136 Lotus japonicus HOM05D007211 ORTHO05D009060 1.5e-29 132.5 80 77.5
Oeu029529.1 Olea europaea HOM05D007211 ORTHO05D009060 1.9e-29 132.1 80 76.2
PSO541G5220 Papaver somniferum HOM05D007211 ORTHO05D009060 1.9e-29 132.1 81 76.5
RcHm_v2.0_Chr6g0254661 Rosa chinensis HOM05D007211 ORTHO05D009060 1.9e-29 132.1 80 76.2
TWI31G1006 Tripterygium wilfordii HOM05D007211 ORTHO05D009060 1.9e-29 132.1 80 73.8
RcHm_v2.0_Chr6g0254711 Rosa chinensis HOM05D007211 ORTHO05D009060 2.5e-29 131.7 80 76.2
TAR376G0209 Trochodendron aralioides HOM05D007211 ORTHO05D009060 2.5e-29 131.7 80 76.2
Psat4g228560 Pisum sativum HOM05D007211 ORTHO05D009060 5.6e-29 130.6 80 76.2
Rhsim11G0157000 Rhododendron simsii HOM05D007211 ORTHO05D009060 5.6e-29 130.6 80 75.0
ECA240G2095 Erigeron canadensis HOM05D007211 ORTHO05D009060 7.3e-29 130.2 80 75.0
Migut.B00396 Erythranthe guttata HOM05D007211 ORTHO05D009060 7.3e-29 130.2 80 75.0
PGSC0003DMG400025763 Solanum tuberosum HOM05D007211 ORTHO05D009060 7.3e-29 130.2 80 73.8
FvH4_2g04840 Fragaria vesca HOM05D007211 ORTHO05D009060 9.6e-29 129.8 80 75.0
FAN15G0614 Fragaria x ananassa HOM05D000062 ORTHO05D000043 9.6e-29 129.8 80 75.0
FAN24G1282 Fragaria x ananassa HOM05D000062 ORTHO05D000043 9.6e-29 129.8 80 75.0
AL3G32910 Arabidopsis lyrata HOM05D007211 ORTHO05D009060 1.3e-28 129.4 81 76.5
Cc02_g19360 Coffea canephora HOM05D007211 ORTHO05D009060 1.3e-28 129.4 80 73.8
Medtr5g004970 Medicago truncatula HOM05D007211 ORTHO05D009060 1.3e-28 129.4 80 76.2
Nitab4.5_0001480g0150 Nicotiana tabacum HOM05D007211 ORTHO05D009060 1.3e-28 129.4 80 73.8
Sopen01g049710 Solanum pennellii HOM05D007211 ORTHO05D009060 1.6e-28 129.0 80 72.5
BcaC05g28470 Brassica carinata HOM05D007211 ORTHO05D009060 2.1e-28 128.6 81 76.5
BolC5t33279H Brassica oleracea HOM05D007211 ORTHO05D009060 2.1e-28 128.6 81 76.5
CARHR094930 Cardamine hirsuta HOM05D007211 ORTHO05D009060 2.1e-28 128.6 81 75.3
AUR62039062 Chenopodium quinoa HOM05D007211 ORTHO05D009060 2.1e-28 128.6 80 72.5
arahy.Tifrunner.gnm1.ann1.0PG00T Arachis hypogaea HOM05D007211 ORTHO05D009060 2.8e-28 128.3 80 75.0
arahy.Tifrunner.gnm1.ann1.UEWU3Q Arachis hypogaea HOM05D007211 ORTHO05D009060 2.8e-28 128.3 80 75.0
arahy.Tifrunner.gnm1.ann1.YF4EPK Arachis hypogaea HOM05D007211 ORTHO05D009060 2.8e-28 128.3 80 75.0
Ca_24347_v3 Cicer arietinum L. HOM05D007211 ORTHO05D009060 2.8e-28 128.3 80 75.0
MD05G1023600 Malus domestica HOM05D007211 ORTHO05D009060 2.8e-28 128.3 80 75.0
A05p30110 Brassica napus HOM05D002228 ORTHO05D002347 3.6e-28 127.9 81 75.3
C05p45540 Brassica napus HOM05D007211 ORTHO05D009060 3.6e-28 127.9 81 75.3
BraA05t21851Z Brassica rapa HOM05D002228 ORTHO05D002347 3.6e-28 127.9 81 75.3
TPR.G21608 Trifolium pratense HOM05D007211 ORTHO05D009060 3.6e-28 127.9 80 75.0
AUR62010326 Chenopodium quinoa HOM05D007211 ORTHO05D009060 4.8e-28 127.5 80 73.8
Sp3g17560 Schrenkiella parvula HOM05D007211 ORTHO05D009060 4.8e-28 127.5 81 74.1
AT3G19508 Arabidopsis thaliana HOM05D007211 ORTHO05D009060 6.2e-28 127.1 81 74.1
BcaC09g48904 Brassica carinata HOM05D007211 ORTHO05D009060 6.2e-28 127.1 81 74.1
A01p35210 Brassica napus HOM05D007211 ORTHO05D009060 6.2e-28 127.1 81 74.1
BraA01t03602Z Brassica rapa HOM05D007211 ORTHO05D009060 6.2e-28 127.1 81 74.1
unitig_0.g876 Utricularia gibba HOM05D007211 ORTHO05D009060 6.2e-28 127.1 80 76.2
EL10Ac9g22259 Beta vulgaris HOM05D007211 ORTHO05D009060 8.1e-28 126.7 80 71.2
FAN27G1079 Fragaria x ananassa HOM05D007211 ORTHO05D009060 1.1e-27 126.3 80 73.8
BcaC09g48910 Brassica carinata HOM05D002228 ORTHO05D002347 1.4e-27 125.9 81 72.8
C01p44630 Brassica napus HOM05D007211 ORTHO05D009060 1.4e-27 125.9 81 72.8
BolC1t04431H Brassica oleracea HOM05D007211 ORTHO05D009060 1.4e-27 125.9 81 72.8
Carub.0003s1931 Capsella rubella HOM05D007211 ORTHO05D009060 1.4e-27 125.9 81 74.1
DCAR_029091 Daucus carota HOM05D007211 ORTHO05D009060 1.8e-27 125.6 80 71.2
Aa31LG8G6260 Aethionema arabicum HOM05D007211 ORTHO05D009060 2.4e-27 125.2 81 74.1
BcaB06g26010 Brassica carinata HOM05D007211 ORTHO05D009060 4.0e-27 124.4 81 72.8
Cfa004601 Carpinus fangiana HOM05D007211 ORTHO05D009060 9.9e-26 119.8 81 67.9
Lalb_Chr09g0319591 Lupinus albus HOM05D007211 ORTHO05D009060 2.2e-25 118.6 80 71.2
Glyma.01G243800 Glycine max HOM05D007211 ORTHO05D009060 2.4e-24 115.2 80 68.8
Nitab4.5_0004326g0030 Nicotiana tabacum HOM05D007211 ORTHO05D009060 3.2e-24 114.8 66 80.3
Phvul.002G053100 Phaseolus vulgaris HOM05D007211 ORTHO05D009060 3.2e-24 114.8 80 70.0
MD10G1099000 Malus domestica HOM05D007211 ORTHO05D009060 3.5e-23 111.3 69 73.9
CAN.G606.15 Capsicum annuum HOM05D007211 ORTHO05D009060 7.9e-23 110.2 65 78.5
CDE07G1397 Ceratophyllum demersum HOM05D007211 ORTHO05D009060 3.9e-22 107.8 80 66.2
Os01g0342800 Oryza sativa ssp. japonica HOM05D007211 ORTHO05D009060 1.8e-19 99.0 77 64.9
Sabra16G0187800 Salix brachista HOM05D007211 ORTHO05D009060 5.3e-19 97.4 57 78.9
BcaB04g20701 Brassica carinata HOM05D002228 ORTHO05D002347 9.0e-19 96.7 93 55.9
MBI16_g16358_MAGBIO Magnolia biondii HOM05D007211 ORTHO05D009060 2.0e-18 95.5 61 75.4
BcaC09g48905 Brassica carinata HOM05D007211 ORTHO05D009060 2.6e-18 95.1 86 60.5
Zm00001eb307960 Zea mays HOM05D007211 ORTHO05D009060 1.7e-17 92.4 76 61.8
BcaC09g48902 Brassica carinata HOM05D007211 ORTHO05D009060 6.5e-17 90.5 109 47.7
AagrBONN_evm.TU.Sc2ySwM_362.2090 Anthoceros agrestis HOM05D007211 ORTHO05D009060 6.0e-15 84.0 81 51.9
AagrBONN_evm.TU.Sc2ySwM_362.1547 Anthoceros agrestis HOM05D007211 ORTHO05D009060 3.0e-14 81.6 81 50.6
BcaC09g48907 Brassica carinata HOM05D007211 ORTHO05D009060 2.5e-13 78.6 54 72.2
Pp3c17_14820 Physcomitrium patens HOM05D007211 ORTHO05D009060 3.8e-09 64.7 60 51.7
CBR_g972 Chara braunii HOM05D007211 ORTHO05D009060 5.0e-09 64.3 69 42.0
Duzib248G0756 Durio zibethinus HOM05D007211 ORTHO05D009060 2.5e-08 62.0 40 72.5
AagrBONN_evm.TU.Sc2ySwM_344.3864 Anthoceros agrestis HOM05D007211 ORTHO05D009060 4.2e-08 61.2 59 50.8
Hma1.2p1_2341F.1_g320300 Hydrangea macrophylla HOM05D007211 ORTHO05D009060 1.8e-06 55.8 80 42.5


User provided reference genes

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