Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p032060 Quercus lobata HOM05D007407 ORTHO05D009298 1.5e-68 262.7 132 100.0
CiPaw.05G014900 Carya illinoinensis HOM05D007407 ORTHO05D009298 1.7e-59 232.6 132 88.6
Aqoxy6G02771 Aquilegia oxysepala HOM05D007407 ORTHO05D009298 6.4e-59 230.7 132 86.4
TAR628G1347 Trochodendron aralioides HOM05D007407 ORTHO05D009298 6.4e-59 230.7 132 87.1
GSVIVG01037877001 Vitis vinifera HOM05D007407 ORTHO05D009298 1.9e-58 229.2 132 85.6
Gohir.A03G184200 Gossypium hirsutum HOM05D007407 ORTHO05D009298 3.2e-58 228.4 132 85.6
Gohir.D02G205700 Gossypium hirsutum HOM05D007407 ORTHO05D009298 3.2e-58 228.4 132 85.6
Gorai.005G233100 Gossypium raimondii HOM05D007407 ORTHO05D009298 3.2e-58 228.4 132 85.6
Duzib052G0893 Durio zibethinus HOM05D007407 ORTHO05D009298 4.2e-58 228.0 132 86.4
RhsimUnG0126400 Rhododendron simsii HOM05D007407 ORTHO05D009298 4.2e-58 228.0 131 86.3
Atru.chr5.2418 Acer truncatum HOM05D007407 ORTHO05D009298 9.3e-58 226.9 132 87.1
Thecc.02G113100 Theobroma cacao HOM05D007407 ORTHO05D009298 9.3e-58 226.9 132 86.4
AUR62008735 Chenopodium quinoa HOM05D007407 ORTHO05D009298 1.6e-57 226.1 132 84.8
Hma1.2p1_1023F.1_g248940 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 2.1e-57 225.7 131 85.5
MD10G1101800 Malus domestica HOM05D007407 ORTHO05D009298 2.1e-57 225.7 131 87.0
RcHm_v2.0_Chr6g0254151 Rosa chinensis HOM05D007407 ORTHO05D009298 2.7e-57 225.3 132 87.9
ClCG10G010580 Citrullus lanatus HOM05D007407 ORTHO05D009298 3.5e-57 224.9 132 85.6
Ciclev10029563m.g Citrus clementina HOM05D007407 ORTHO05D009298 3.5e-57 224.9 132 84.8
CsaV3_4G000500 Cucumis sativus L. HOM05D007407 ORTHO05D009298 7.9e-57 223.8 132 85.6
MSTRG.27752 Avicennia marina HOM05D007407 ORTHO05D009298 2.3e-56 222.2 132 82.6
Actinidia34378 Actinidia chinensis HOM05D007407 ORTHO05D009298 3.0e-56 221.9 131 83.2
Cc02_g19580 Coffea canephora HOM05D007407 ORTHO05D009298 3.0e-56 221.9 132 83.3
Nn1g04637 Nelumbo nucifera HOM05D007407 ORTHO05D009298 3.0e-56 221.9 131 83.2
Oeu044262.1 Olea europaea HOM05D007407 ORTHO05D009298 5.1e-56 221.1 132 83.3
Lj3g0017118 Lotus japonicus HOM05D007407 ORTHO05D009298 1.1e-55 219.9 132 81.8
Dinv42215 Davidia involucrata HOM05D007407 ORTHO05D009298 1.5e-55 219.5 133 84.2
Psat5g233480 Pisum sativum HOM05D007407 ORTHO05D009298 3.3e-55 218.4 132 81.8
Potri.009G091800 Populus trichocarpa HOM05D007407 ORTHO05D009298 5.6e-55 217.6 132 83.3
Cpa.g.c35560 Carica papaya HOM05D007407 ORTHO05D009298 7.4e-55 217.2 139 82.0
CAN.G13.9 Capsicum annuum HOM05D007407 ORTHO05D009298 1.3e-54 216.5 132 81.1
Sed0024111 Sechium edule HOM05D007407 ORTHO05D009298 1.3e-54 216.5 132 81.8
Sc18g0003630 Simmondsia chinensis HOM05D007407 ORTHO05D009298 1.3e-54 216.5 132 82.6
SalBow3G4546 Salvia bowleyana HOM05D007407 ORTHO05D009298 1.6e-54 216.1 132 79.5
FAN15G3071 Fragaria x ananassa HOM05D007407 ORTHO05D009298 6.2e-54 214.2 132 83.3
Sabra09G0070800 Salix brachista HOM05D007407 ORTHO05D009298 6.2e-54 214.2 132 81.8
FvH4_2g04570 Fragaria vesca HOM05D007407 ORTHO05D009298 8.1e-54 213.8 132 81.8
Phvul.005G003200 Phaseolus vulgaris HOM05D007407 ORTHO05D009298 1.1e-53 213.4 132 79.5
TPR.G5138 Trifolium pratense HOM05D007407 ORTHO05D009298 1.4e-53 213.0 132 78.8
FAN27G0322 Fragaria x ananassa HOM05D007407 ORTHO05D009298 1.8e-53 212.6 132 82.6
CANSAT25G3533 Cannabis sativa HOM05D007407 ORTHO05D009298 3.1e-53 211.8 132 80.3
CANSAT25G2132 Cannabis sativa HOM05D007407 ORTHO05D009298 6.9e-53 210.7 132 80.3
Migut.I00274 Erythranthe guttata HOM05D007407 ORTHO05D009298 4.5e-52 208.0 132 79.5
Peaxi162Scf00152g00338 Petunia axillaris HOM05D007407 ORTHO05D009298 5.8e-52 207.6 132 78.0
Sopen11g019840 Solanum pennellii HOM05D007407 ORTHO05D009298 1.7e-51 206.1 132 78.0
HanXRQChr16g0509111 Helianthus annuus HOM05D007407 ORTHO05D009298 4.9e-51 204.5 129 76.7
Medtr0393s0040 Medicago truncatula HOM05D007407 ORTHO05D009298 4.9e-51 204.5 128 77.3
Glyma.04G111400 Glycine max HOM05D007407 ORTHO05D009298 8.4e-51 203.8 132 75.0
Medtr3g010320 Medicago truncatula HOM05D007407 ORTHO05D009298 1.9e-50 202.6 132 77.3
TWI59G1341 Tripterygium wilfordii HOM05D007407 ORTHO05D009298 3.2e-50 201.8 138 77.5
EL10Ac6g13315 Beta vulgaris HOM05D007407 ORTHO05D009298 4.2e-50 201.4 132 75.8
Rhsim11G0155200 Rhododendron simsii HOM05D007407 ORTHO05D009298 4.2e-50 201.4 112 88.4
Eucgr.I01082 Eucalyptus grandis HOM05D007407 ORTHO05D009298 1.8e-48 196.1 115 84.3
SGA_v2.0_scaffold13G06621 Striga asiatica HOM05D007407 ORTHO05D009298 1.8e-48 196.1 175 61.1
Manes.07G063400 Manihot esculenta HOM05D007407 ORTHO05D009298 5.1e-48 194.5 180 60.6
Lalb_Chr18g0048491 Lupinus albus HOM05D007407 ORTHO05D009298 8.7e-48 193.7 132 70.5
vmacro01981 Vaccinium macrocarpon HOM05D007407 ORTHO05D009298 1.5e-47 193.0 191 59.7
arahy.Tifrunner.gnm1.ann1.2Y2YM1 Arachis hypogaea HOM05D007407 ORTHO05D009298 3.3e-47 191.8 132 72.7
arahy.Tifrunner.gnm1.ann1.D6X9Y4 Arachis hypogaea HOM05D007407 ORTHO05D009298 9.6e-47 190.3 132 72.0
Thhalv10026553m.g Eutrema salsugineum HOM05D007407 ORTHO05D009298 9.6e-47 190.3 132 69.7
Carub.0007s0650 Capsella rubella HOM05D007407 ORTHO05D009298 2.8e-46 188.7 132 68.9
Aa31sc211G10 Aethionema arabicum HOM05D007407 ORTHO05D009298 3.7e-46 188.3 132 69.7
CARHR242020 Cardamine hirsuta HOM05D007407 ORTHO05D009298 3.7e-46 188.3 132 68.9
BraA01t00434Z Brassica rapa HOM05D007407 ORTHO05D009298 4.8e-46 188.0 132 68.2
Glyma.06G322800 Glycine max HOM05D007407 ORTHO05D009298 6.2e-46 187.6 195 54.9
Sp7g31660 Schrenkiella parvula HOM05D007407 ORTHO05D009298 8.2e-46 187.2 132 68.2
AL7G17500 Arabidopsis lyrata HOM05D007407 ORTHO05D009298 1.8e-45 186.0 132 68.2
Nitab4.5_0000088g0130 Nicotiana tabacum HOM05D007407 ORTHO05D009298 2.4e-45 185.7 117 75.2
DCAR_001669 Daucus carota HOM05D007407 ORTHO05D009298 6.9e-45 184.1 127 69.3
Lsat_1_v5_gn_7_86121 Lactuca sativa HOM05D007407 ORTHO05D009298 1.5e-44 183.0 114 77.2
AT4G33925 Arabidopsis thaliana HOM05D007407 ORTHO05D009298 2.6e-44 182.2 132 66.7
Hund12642 Selenicereus undatus HOM05D007407 ORTHO05D009298 1.0e-43 180.3 118 75.4
Duzib132G0979 Durio zibethinus HOM05D007407 ORTHO05D009298 5.5e-42 174.5 128 69.5
THA.LOC104807229 Tarenaya hassleriana HOM05D007407 ORTHO05D009298 7.1e-42 174.1 105 79.0
C01p04860 Brassica napus HOM05D007407 ORTHO05D009298 1.6e-41 172.9 136 63.2
VMungo1080G0753 Vigna mungo HOM05D007407 ORTHO05D009298 2.1e-41 172.6 106 78.3
MD05G1094600 Malus domestica HOM05D007407 ORTHO05D009298 1.1e-39 166.8 100 81.0
SHI05205 Sapria himalayana HOM05D007407 ORTHO05D009298 7.4e-39 164.1 103 75.7
HPP92_010144 Vanilla planifolia HOM05D007407 ORTHO05D009298 9.7e-39 163.7 131 59.5
Solyc11g044330.3 Solanum lycopersicum HOM05D007407 ORTHO05D009298 4.8e-38 161.4 98 80.6
ECA236G1324 Erigeron canadensis HOM05D007407 ORTHO05D009298 1.8e-37 159.5 97 79.4
SEGI_09286 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 9.0e-37 157.1 121 61.2
BolC1t00470H Brassica oleracea HOM05D007407 ORTHO05D009298 1.2e-36 156.8 105 69.5
Nitab4.5_0000700g0060 Nicotiana tabacum HOM05D007407 ORTHO05D009298 1.2e-36 156.8 105 74.3
Zm00001eb326460 Zea mays HOM05D007407 ORTHO05D009298 3.4e-36 155.2 128 60.2
PGSC0003DMG400023130 Solanum tuberosum HOM05D007407 ORTHO05D009298 1.4e-34 149.8 91 80.2
Prupe.8G139500 Prunus persica HOM05D007407 ORTHO05D009298 4.3e-31 138.3 132 62.1
Hma1.2p1_1023F.1_g248930 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 1.7e-30 136.3 132 59.8
Pp3c22_18210 Physcomitrium patens HOM05D007407 ORTHO05D009298 2.6e-28 129.0 122 51.6
Mapoly0083s0061 Marchantia polymorpha HOM05D007407 ORTHO05D009298 1.9e-26 122.9 110 50.0
Manes.07G065401 Manihot esculenta HOM05D007407 ORTHO05D009298 1.1e-23 113.6 69 82.6
AagrBONN_evm.TU.Sc2ySwM_228.2221 Anthoceros agrestis HOM05D007407 ORTHO05D009298 2.8e-22 109.0 111 49.5
CBR_g6331 Chara braunii HOM05D007407 ORTHO05D009298 5.3e-21 104.8 118 46.6
MD00G1205200 Malus domestica HOM05D007407 ORTHO05D009298 1.5e-20 103.2 63 81.0
SMO330G0043 Selaginella moellendorffii HOM05D007407 ORTHO05D009298 7.7e-20 100.9 102 49.0
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 7.2e-18 94.4 67 65.7
Cre16.g668000 Chlamydomonas reinhardtii HOM05D007407 ORTHO05D009298 6.1e-17 91.3 109 45.9
MCO15G608 Micromonas commoda HOM05D007407 ORTHO05D009298 7.4e-15 84.3 133 35.3
Medtr8g072380 Medicago truncatula HOM05D007407 ORTHO05D009298 1.7e-11 73.2 67 58.2
CBR_g37936 Chara braunii HOM05D019869 ORTHO05D028728 5.5e-10 68.2 83 39.8
COL.COLO4_30985 Corchorus olitorius HOM05D001363 ORTHO05D006255 4.7e-09 65.1 55 61.8
unitig_747.g21223 Utricularia gibba HOM05D007407 ORTHO05D009298 6.1e-09 64.7 47 59.6
Medtr2g093710 Medicago truncatula HOM05D007407 ORTHO05D009298 1.0e-08 63.9 96 39.6
unitig_747.g21224 Utricularia gibba HOM05D007407 ORTHO05D009298 1.5e-07 60.1 37 67.6


User provided reference genes

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