Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p031947 Quercus lobata HOM05D006481 ORTHO05D008160 0.0e+00 1308.9 845 100.0
Cfa004657 Carpinus fangiana HOM05D006481 ORTHO05D008160 9.9e-246 854.0 933 63.1
Haze_10252 Corylus avellana HOM05D006481 ORTHO05D008160 1.1e-241 840.5 937 61.2
CiPaw.05G015400 Carya illinoinensis HOM05D006481 ORTHO05D008160 4.5e-230 802.0 872 59.3
Dinv15788 Davidia involucrata HOM05D006481 ORTHO05D008160 6.5e-205 718.4 877 60.0
Prupe.8G140600 Prunus persica HOM05D006481 ORTHO05D008160 1.6e-203 713.8 851 63.2
TWI14G1262 Tripterygium wilfordii HOM05D006481 ORTHO05D008160 7.0e-199 698.4 876 58.9
FvH4_2g03900 Fragaria vesca HOM05D006481 ORTHO05D008160 1.6e-198 697.2 853 65.8
FAN27G2785 Fragaria x ananassa HOM05D006481 ORTHO05D008160 3.5e-198 696.0 853 65.5
RcHm_v2.0_Chr6g0252931 Rosa chinensis HOM05D006481 ORTHO05D008160 5.9e-198 695.3 852 63.1
Manes.10G058310 Manihot esculenta HOM05D006481 ORTHO05D008160 1.7e-197 693.7 856 59.7
FAN15G2146 Fragaria x ananassa HOM05D006481 ORTHO05D008160 1.3e-192 677.6 853 64.4
Dinv42219 Davidia involucrata HOM05D006481 ORTHO05D008160 5.0e-189 665.6 879 57.8
Thecc.02G113600 Theobroma cacao HOM05D006481 ORTHO05D008160 3.5e-182 642.9 861 56.0
MD05G1096200 Malus domestica HOM05D006481 ORTHO05D008160 1.5e-180 637.5 896 58.8
Gohir.D12G020600 Gossypium hirsutum HOM05D006481 ORTHO05D008160 2.6e-177 626.7 873 51.7
TAR376G0872 Trochodendron aralioides HOM05D006481 ORTHO05D008160 6.3e-176 622.1 864 53.0
Duzib132G1015 Durio zibethinus HOM05D006481 ORTHO05D008160 2.0e-174 617.1 869 54.5
COL.COLO4_32543 Corchorus olitorius HOM05D006481 ORTHO05D008160 1.3e-173 614.4 864 51.2
CSS0029586 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 1.5e-169 600.9 870 53.2
Potri.009G090900 Populus trichocarpa HOM05D006481 ORTHO05D008160 2.0e-169 600.5 858 54.7
CSS0020952 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 3.4e-169 599.7 870 52.3
Actinidia34372 Actinidia chinensis HOM05D006481 ORTHO05D008160 3.7e-168 596.3 887 51.0
Cpa.g.sc106.79 Carica papaya HOM05D006481 ORTHO05D008160 1.9e-164 583.9 1022 46.9
Potri.001G296700 Populus trichocarpa HOM05D006481 ORTHO05D008160 8.0e-163 578.6 860 52.6
Gorai.008G021000 Gossypium raimondii HOM05D006481 ORTHO05D008160 2.3e-162 577.0 930 47.2
Lj5g0022753 Lotus japonicus HOM05D006481 ORTHO05D008160 1.9e-159 567.4 812 55.8
Gohir.A12G020400 Gossypium hirsutum HOM05D006481 ORTHO05D008160 3.2e-159 566.6 866 49.7
Medtr1g106795 Medicago truncatula HOM05D006481 ORTHO05D008160 1.3e-157 561.2 834 53.6
Lalb_Chr02g0145111 Lupinus albus HOM05D006481 ORTHO05D008160 1.2e-150 538.1 887 49.7
Ca_11047_v3 Cicer arietinum L. HOM05D006481 ORTHO05D008160 1.9e-148 530.8 814 52.5
Ciclev10027845m.g Citrus clementina HOM05D006481 ORTHO05D008160 2.0e-145 520.8 812 44.7
Glyma.20G132200 Glycine max HOM05D006481 ORTHO05D008160 5.8e-145 519.2 450 67.6
Nitab4.5_0001105g0200 Nicotiana tabacum HOM05D006481 ORTHO05D008160 1.3e-144 518.1 833 50.8
Nitab4.5_0004685g0050 Nicotiana tabacum HOM05D006481 ORTHO05D008160 1.7e-144 517.7 858 53.4
arahy.Tifrunner.gnm1.ann1.RQ9967 Arachis hypogaea HOM05D006481 ORTHO05D008160 1.1e-143 515.0 806 49.5
Sopen01g049510 Solanum pennellii HOM05D006481 ORTHO05D008160 2.7e-142 510.4 920 51.5
TPR.G27130 Trifolium pratense HOM05D006481 ORTHO05D008160 1.3e-141 508.1 818 51.1
GSVIVG01037865001 Vitis vinifera HOM05D006481 ORTHO05D008160 8.7e-141 505.4 468 63.2
Sabra16G0185800 Salix brachista HOM05D006481 ORTHO05D008160 1.5e-140 504.6 863 51.4
MELO3C017986.2 Cucumis melo HOM05D006481 ORTHO05D008160 1.6e-139 501.1 859 46.3
arahy.Tifrunner.gnm1.ann1.IH69Y8 Arachis hypogaea HOM05D006481 ORTHO05D008160 4.7e-139 499.6 806 49.4
Solyc01g107260.4 Solanum lycopersicum HOM05D006481 ORTHO05D008160 1.1e-138 498.4 926 48.5
PSO675G3182 Papaver somniferum HOM05D006481 ORTHO05D008160 1.8e-138 497.7 865 51.1
Phvul.007G043300 Phaseolus vulgaris HOM05D006481 ORTHO05D008160 2.4e-138 497.3 874 45.5
Sed0008985 Sechium edule HOM05D006481 ORTHO05D008160 4.0e-138 496.5 869 44.3
Sabra09G0070200 Salix brachista HOM05D006481 ORTHO05D008160 1.5e-137 494.6 847 49.9
DCAR_021965 Daucus carota HOM05D006481 ORTHO05D008160 1.3e-136 491.5 945 42.6
Lj5A217G88 Lonicera japonica HOM05D006481 ORTHO05D008160 3.8e-136 490.0 864 48.8
Atru.BG.62.p Acer truncatum HOM05D006481 ORTHO05D008160 1.9e-135 487.6 448 64.1
Aqoxy6G02732 Aquilegia oxysepala HOM05D006481 ORTHO05D008160 1.9e-135 487.6 884 47.1
CsaV3_4G000490 Cucumis sativus L. HOM05D006481 ORTHO05D008160 2.4e-135 487.3 857 46.1
PSO541G1903 Papaver somniferum HOM05D006481 ORTHO05D008160 5.4e-135 486.1 866 50.7
VMungo0720G0067 Vigna mungo HOM05D006481 ORTHO05D008160 3.5e-134 483.4 830 47.8
Cc02_g30880 Coffea canephora HOM05D006481 ORTHO05D008160 9.6e-132 475.3 914 46.6
CAN.G606.42 Capsicum annuum HOM05D006481 ORTHO05D008160 7.9e-126 455.7 981 38.7
vmacro01976 Vaccinium macrocarpon HOM05D006481 ORTHO05D008160 3.0e-125 453.8 799 45.1
Psat6g216240 Pisum sativum HOM05D006481 ORTHO05D008160 8.7e-125 452.2 434 62.4
MSTRG.16692 Avicennia marina HOM05D006481 ORTHO05D008160 1.3e-123 448.4 868 45.0
SalBow6G0734 Salvia bowleyana HOM05D006481 ORTHO05D008160 2.2e-120 437.6 818 46.6
Eucgr.I01079 Eucalyptus grandis HOM05D006481 ORTHO05D008160 3.8e-120 436.8 750 48.8
Oeu021369.1 Olea europaea HOM05D006481 ORTHO05D008160 3.2e-119 433.7 839 42.6
ClCG10G010570 Citrullus lanatus HOM05D006481 ORTHO05D008160 4.6e-118 429.9 738 43.1
AUR62031332 Chenopodium quinoa HOM05D006481 ORTHO05D008160 6.7e-117 426.0 784 42.6
TAR628G0609 Trochodendron aralioides HOM05D006481 ORTHO05D008160 5.7e-116 422.9 501 53.5
AUR62027350 Chenopodium quinoa HOM05D006481 ORTHO05D008160 1.3e-115 421.8 785 42.4
Aa31LG10G4220 Aethionema arabicum HOM05D006481 ORTHO05D008160 7.6e-113 412.5 515 53.2
Peaxi162Scf00016g02732 Petunia axillaris HOM05D006481 ORTHO05D008160 7.1e-111 406.0 805 51.1
THA.LOC104825834 Tarenaya hassleriana HOM05D006481 ORTHO05D008160 1.0e-109 402.1 861 44.8
Ah.14g085520 Amaranthus hybridus HOM05D006481 ORTHO05D008160 5.1e-109 399.8 869 41.7
Rhsim11G0154700 Rhododendron simsii HOM05D006481 ORTHO05D008160 8.7e-109 399.1 912 37.3
RhsimUnG0125900 Rhododendron simsii HOM05D006481 ORTHO05D008160 1.1e-108 398.7 941 37.1
EL10Ac8g19363 Beta vulgaris HOM05D006481 ORTHO05D008160 7.4e-108 396.0 551 47.5
PGSC0003DMG400025848 Solanum tuberosum HOM05D006481 ORTHO05D008160 3.1e-106 390.6 902 46.1
ECA234G0568 Erigeron canadensis HOM05D006481 ORTHO05D008160 2.6e-105 387.5 444 52.5
Migut.B00421 Erythranthe guttata HOM05D006481 ORTHO05D008160 1.9e-103 381.3 845 37.2
unitig_744.g24217 Utricularia gibba HOM05D006481 ORTHO05D008160 3.2e-103 380.6 847 39.0
Sp1g36750 Schrenkiella parvula HOM05D006481 ORTHO05D008160 9.4e-103 379.0 448 53.6
AL1G57410 Arabidopsis lyrata HOM05D006481 ORTHO05D008160 7.9e-102 375.9 446 54.9
Thhalv10011233m.g Eutrema salsugineum HOM05D006481 ORTHO05D008160 4.3e-100 370.2 707 45.1
AT1G49870 Arabidopsis thaliana HOM05D006481 ORTHO05D008160 2.2e-99 367.9 443 53.7
BcaB04g17289 Brassica carinata HOM05D006481 ORTHO05D008160 7.7e-97 359.4 441 53.3
A08p03520 Brassica napus HOM05D006481 ORTHO05D008160 3.8e-96 357.1 830 41.9
Carub.0001s3908 Capsella rubella HOM05D006481 ORTHO05D008160 9.4e-95 352.4 518 47.1
HanXRQChr16g0514441 Helianthus annuus HOM05D006481 ORTHO05D008160 1.4e-93 348.6 451 49.0
BolC8t47171H Brassica oleracea HOM05D006481 ORTHO05D008160 1.5e-92 345.1 832 41.8
ATR0030G005 Amborella trichopoda HOM05D006481 ORTHO05D008160 2.0e-92 344.7 460 52.8
BraA08t32385Z Brassica rapa HOM05D006481 ORTHO05D008160 8.2e-91 339.3 830 41.7
Lsat_1_v5_gn_5_114361 Lactuca sativa HOM05D006481 ORTHO05D008160 2.0e-89 334.7 490 46.7
SGA_v2.0_scaffold225G43011 Striga asiatica HOM05D006481 ORTHO05D008160 1.0e-88 332.4 456 48.7
CARHR039920 Cardamine hirsuta HOM05D006481 ORTHO05D008160 3.8e-88 330.5 516 45.5
C08p03680 Brassica napus HOM05D006481 ORTHO05D008160 5.0e-88 330.1 832 40.5
Os03g0604600 Oryza sativa ssp. japonica HOM05D006481 ORTHO05D008160 2.5e-87 327.8 454 49.3
Zm00001eb050130 Zea mays HOM05D006481 ORTHO05D008160 8.2e-83 312.8 450 48.2
FAN20G1292 Fragaria x ananassa HOM05D006481 ORTHO05D008160 7.7e-81 306.2 548 60.8
HPP92_017760 Vanilla planifolia HOM05D006481 ORTHO05D008160 1.3e-80 305.4 465 44.7
Sc14g0002570 Simmondsia chinensis HOM05D006481 ORTHO05D008160 6.8e-53 213.4 671 36.8
SEGI_11188 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 1.5e-47 195.7 497 35.8
SEGI_37018 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 1.5e-47 195.7 497 35.8
CDE04G1272 Ceratophyllum demersum HOM05D006481 ORTHO05D008160 2.8e-46 191.4 343 42.9
MD10G1102400 Malus domestica HOM05D006481 ORTHO05D008160 9.8e-44 183.0 147 68.7
Pp3c18_18840 Physcomitrium patens HOM05D006481 ORTHO05D008160 7.3e-39 166.8 317 42.0
SEGI_25924 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 4.7e-38 164.1 359 39.3
Hma1.2p1_1361F.1_g278150 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 7.1e-34 150.2 177 54.8
SMO196G0099 Selaginella moellendorffii HOM05D006481 ORTHO05D008160 8.6e-32 143.3 424 34.0
MD10G1102500 Malus domestica HOM05D006481 ORTHO05D008160 5.6e-31 140.6 175 56.0
SHI05066 Sapria himalayana HOM05D006481 ORTHO05D008160 4.4e-28 131.0 132 56.8
Hma1.2p1_0000F.1_g001000 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 7.6e-28 130.2 430 35.1
EL10Ac6g13964 Beta vulgaris HOM05D006481 ORTHO05D008160 8.4e-27 126.7 262 40.8
CBR_g49330 Chara braunii HOM05D006481 ORTHO05D008160 5.1e-24 117.5 164 44.5
TAR628G0206 Trochodendron aralioides HOM05D006481 ORTHO05D008160 2.8e-22 111.7 267 47.9
RcHm_v2.0_Chr4g0423461 Rosa chinensis HOM05D006481 ORTHO05D000001 8.1e-22 110.2 113 57.5
Duzib052G0964 Durio zibethinus HOM05D006481 ORTHO05D008160 1.8e-21 109.0 140 52.1
Atru.chr5.2411 Acer truncatum HOM05D006481 ORTHO05D008160 1.3e-16 92.8 63 71.4
RcHm_v2.0_Chr6g0252961 Rosa chinensis HOM05D006481 ORTHO05D008160 1.5e-15 89.4 62 67.7
SGA_v2.0_scaffold4001G54416 Striga asiatica HOM05D006481 ORTHO05D008160 2.4e-10 72.0 63 55.6
Hma1.2p1_0883F.1_g232290 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 4.2e-10 71.2 78 55.1
RcHm_v2.0_Chr4g0421911 Rosa chinensis HOM05D006481 ORTHO05D008160 2.1e-09 68.9 75 53.3
SHI05065 Sapria himalayana HOM05D006481 ORTHO05D008160 2.1e-09 68.9 114 41.2
Oeu039499.1 Olea europaea HOM05D006481 ORTHO05D008160 3.5e-09 68.2 39 79.5
BcaC05g27423 Brassica carinata HOM05D006481 ORTHO05D008160 5.1e-08 64.3 56 58.9


User provided reference genes

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