Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p029955 Quercus lobata HOM05D007571 ORTHO05D009439 9.6e-63 243.4 132 100.0
Haze_10272 Corylus avellana HOM05D007571 ORTHO05D009439 6.5e-43 177.6 133 76.7
Ciclev10029547m.g Citrus clementina HOM05D007571 ORTHO05D009439 8.4e-43 177.2 138 71.7
TWI59G0511 Tripterygium wilfordii HOM05D007571 ORTHO05D009439 2.5e-42 175.6 132 68.9
Potri.001G292000 Populus trichocarpa HOM05D007571 ORTHO05D009439 3.2e-42 175.3 135 71.1
MD10G1108300 Malus domestica HOM05D007571 ORTHO05D009439 2.7e-41 172.2 132 68.9
TPR.G21146 Trifolium pratense HOM05D007571 ORTHO05D009439 6.0e-41 171.0 132 70.5
Thecc.02G118900 Theobroma cacao HOM05D007571 ORTHO05D009439 1.0e-40 170.2 147 66.7
Medtr1g106075 Medicago truncatula HOM05D007571 ORTHO05D009439 1.3e-40 169.9 134 71.6
Atru.chr5.2324 Acer truncatum HOM05D007571 ORTHO05D009439 2.3e-40 169.1 134 70.1
Gohir.A12G018900 Gossypium hirsutum HOM05D007571 ORTHO05D009439 6.7e-40 167.5 146 63.0
Gohir.D12G019350 Gossypium hirsutum HOM05D007571 ORTHO05D009439 6.7e-40 167.5 146 63.0
Prupe.8G147200 Prunus persica HOM05D007571 ORTHO05D009439 6.7e-40 167.5 132 68.2
RcHm_v2.0_Chr6g0252541 Rosa chinensis HOM05D007571 ORTHO05D009439 2.5e-39 165.6 132 68.9
Duzib052G0547 Durio zibethinus HOM05D007571 ORTHO05D009439 3.3e-39 165.2 145 62.8
Lalb_Chr21g0308001 Lupinus albus HOM05D007571 ORTHO05D009439 1.3e-38 163.3 133 69.2
FvH4_2g03581 Fragaria vesca HOM05D007571 ORTHO05D009439 3.7e-38 161.8 132 66.7
FAN20G2923 Fragaria x ananassa HOM05D007571 ORTHO05D009439 4.8e-38 161.4 132 65.9
Glyma.10G256000 Glycine max HOM05D007571 ORTHO05D009439 6.3e-38 161.0 135 68.9
Thhalv10011862m.g Eutrema salsugineum HOM05D007571 ORTHO05D009439 8.2e-38 160.6 132 68.9
Lj5g0013426 Lotus japonicus HOM05D007571 ORTHO05D009439 1.8e-37 159.5 124 69.4
arahy.Tifrunner.gnm1.ann1.A1M8SQ Arachis hypogaea HOM05D007571 ORTHO05D009439 3.1e-37 158.7 126 63.5
arahy.Tifrunner.gnm1.ann1.I40GDJ Arachis hypogaea HOM05D007571 ORTHO05D009439 6.9e-37 157.5 126 62.7
Medtr3g008630 Medicago truncatula HOM05D007571 ORTHO05D009439 1.2e-36 156.8 134 67.2
CANSAT25G0272 Cannabis sativa HOM05D007571 ORTHO05D009439 1.5e-36 156.4 133 65.4
CANSAT25G2750 Cannabis sativa HOM05D007571 ORTHO05D009439 1.5e-36 156.4 133 65.4
VMungo0720G0585 Vigna mungo HOM05D007571 ORTHO05D009439 3.4e-36 155.2 128 68.0
THA.LOC104825387 Tarenaya hassleriana HOM05D007571 ORTHO05D009439 5.9e-36 154.5 132 67.4
Eucgr.G01203 Eucalyptus grandis HOM05D007571 ORTHO05D009439 7.6e-36 154.1 134 67.2
Sp1g36830 Schrenkiella parvula HOM05D007571 ORTHO05D009439 7.6e-36 154.1 132 65.2
Sed0007395 Sechium edule HOM05D007571 ORTHO05D009439 7.6e-36 154.1 141 66.0
Phvul.007G046800 Phaseolus vulgaris HOM05D007571 ORTHO05D009439 1.0e-35 153.7 124 66.9
AL1G57530 Arabidopsis lyrata HOM05D007571 ORTHO05D009439 2.9e-35 152.1 133 67.7
COL.COLO4_32496 Corchorus olitorius HOM05D007571 ORTHO05D009439 2.9e-35 152.1 139 61.9
AT1G49975 Arabidopsis thaliana HOM05D007571 ORTHO05D009439 6.5e-35 151.0 132 65.2
Carub.0001s3916 Capsella rubella HOM05D007571 ORTHO05D009439 6.5e-35 151.0 132 64.4
PGR042G0328 Punica granatum HOM05D007571 ORTHO05D009439 8.5e-35 150.6 144 63.9
CsaV3_7G007730 Cucumis sativus L. HOM05D007571 ORTHO05D009439 4.2e-34 148.3 136 64.7
MELO3C018528.2 Cucumis melo HOM05D007571 ORTHO05D009439 5.5e-34 147.9 137 65.0
GSVIVG01037807001 Vitis vinifera HOM05D007571 ORTHO05D009439 7.2e-34 147.5 119 70.6
Sabra16G0182000 Salix brachista HOM05D007571 ORTHO05D009439 2.1e-33 146.0 174 50.6
A06p03470 Brassica napus HOM05D007571 ORTHO05D009439 7.9e-33 144.1 133 64.7
BraA06t23555Z Brassica rapa HOM05D007571 ORTHO05D009439 7.9e-33 144.1 133 64.7
C06p04720 Brassica napus HOM05D007571 ORTHO05D009439 1.3e-32 143.3 133 64.7
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 1.8e-32 142.9 136 59.6
BcaB07g33447 Brassica carinata HOM05D007571 ORTHO05D009439 3.9e-32 141.7 133 63.2
BcaC08g43171 Brassica carinata HOM05D007571 ORTHO05D009439 5.1e-32 141.4 133 63.9
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.5e-31 139.0 138 58.7
CSS0048413 Camellia sinensis var. sinensis HOM05D007571 ORTHO05D009439 5.7e-31 137.9 128 62.5
TAR628G1270 Trochodendron aralioides HOM05D007571 ORTHO05D009439 5.7e-31 137.9 129 62.8
vmacro19538 Vaccinium macrocarpon HOM05D007571 ORTHO05D009439 5.7e-31 137.9 87 81.6
Actinidia04391 Actinidia chinensis HOM05D007571 ORTHO05D009439 1.3e-30 136.7 123 62.6
Rhsim05G0092500 Rhododendron simsii HOM05D007571 ORTHO05D009439 3.7e-30 135.2 123 60.2
Actinidia27996 Actinidia chinensis HOM05D007571 ORTHO05D009439 1.1e-29 133.7 123 61.8
ClCG02G007100 Citrullus lanatus HOM05D007571 ORTHO05D009439 1.0e-27 127.1 138 57.2
BolC6t35600H Brassica oleracea HOM05D007571 ORTHO05D009439 1.3e-27 126.7 162 52.5
Dinv15820 Davidia involucrata HOM05D007571 ORTHO05D009439 3.8e-27 125.2 121 61.2
Cc02_g09420 Coffea canephora HOM05D007571 ORTHO05D009439 1.1e-26 123.6 123 61.0
ECA238G3778 Erigeron canadensis HOM05D007571 ORTHO05D009439 2.5e-26 122.5 130 57.7
CAN.G1433.5 Capsicum annuum HOM05D007571 ORTHO05D009439 7.2e-26 120.9 125 53.6
PSO675G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 3.6e-25 118.6 131 51.9
Aqoxy6G02559 Aquilegia oxysepala HOM05D007571 ORTHO05D009439 4.7e-25 118.2 130 51.5
Nitab4.5_0017347g0020 Nicotiana tabacum HOM05D007571 ORTHO05D009439 4.7e-25 118.2 125 59.2
Sc05g0005590 Simmondsia chinensis HOM05D007571 ORTHO05D009439 4.7e-25 118.2 82 74.4
Nitab4.5_0000687g0180 Nicotiana tabacum HOM05D007571 ORTHO05D009439 1.4e-24 116.7 125 59.2
Solyc05g150152.1 Solanum lycopersicum HOM05D007571 ORTHO05D009439 1.4e-24 116.7 114 57.0
Lsat_1_v5_gn_2_105800 Lactuca sativa HOM05D007571 ORTHO05D009439 2.3e-24 115.9 129 56.6
Sopen05g033610 Solanum pennellii HOM05D007571 ORTHO05D009439 3.0e-24 115.5 114 56.1
Hund06510 Selenicereus undatus HOM05D007571 ORTHO05D009439 3.9e-24 115.2 134 55.2
HanXRQChr02g0053531 Helianthus annuus HOM05D007571 ORTHO05D009439 1.5e-23 113.2 127 52.8
EL10Ac9g22184 Beta vulgaris HOM05D007571 ORTHO05D009439 2.0e-23 112.8 118 55.1
PSO541G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 2.0e-23 112.8 130 51.5
Peaxi162Scf00519g00423 Petunia axillaris HOM05D007571 ORTHO05D009439 3.3e-23 112.1 93 64.5
Nn6g34507 Nelumbo nucifera HOM05D007571 ORTHO05D009439 4.4e-23 111.7 96 63.5
DCAR_028375 Daucus carota HOM05D007571 ORTHO05D009439 5.7e-23 111.3 125 56.8
Ah.01g007010 Amaranthus hybridus HOM05D007571 ORTHO05D009439 3.7e-22 108.6 96 60.4
AUR62030860 Chenopodium quinoa HOM05D007571 ORTHO05D009439 4.8e-22 108.2 73 72.6
CDE04G1832 Ceratophyllum demersum HOM05D007571 ORTHO05D009439 1.4e-21 106.7 124 50.0
CARHR040010 Cardamine hirsuta HOM05D007571 ORTHO05D009439 1.5e-20 103.2 65 76.9
MSTRG.417 Avicennia marina HOM05D007571 ORTHO05D009439 2.0e-20 102.8 124 54.8
Oeu024805.1 Olea europaea HOM05D007571 ORTHO05D009439 2.0e-20 102.8 125 53.6
MBI16_g39621_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 7.7e-20 100.9 129 47.3
MBI16_g43666_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 7.7e-20 100.9 129 47.3
SalBow6G2573 Salvia bowleyana HOM05D007571 ORTHO05D009439 3.8e-19 98.6 123 49.6
Migut.F01585 Erythranthe guttata HOM05D007571 ORTHO05D009439 6.5e-19 97.8 70 70.0
Os03g0731100 Oryza sativa ssp. japonica HOM05D007571 ORTHO05D009439 1.1e-18 97.1 107 53.3
CiPaw.05G019300 Carya illinoinensis HOM05D000470 ORTHO05D000348 1.9e-18 96.3 60 78.3
PGSC0003DMG400023397 Solanum tuberosum HOM05D007571 ORTHO05D009439 3.6e-17 92.0 59 76.3
SEGI_38446 Sequoiadendron giganteum HOM05D007571 ORTHO05D009439 3.0e-16 89.0 64 71.9
Manes.07G054000 Manihot esculenta HOM05D007571 ORTHO05D009439 2.6e-15 85.9 89 61.8
ATR0739G046 Amborella trichopoda HOM05D007571 ORTHO05D009439 4.4e-15 85.1 63 68.3
Aa31LG10G4150 Aethionema arabicum HOM05D007571 ORTHO05D009439 7.4e-15 84.3 92 58.7
Zm00001eb056210 Zea mays HOM05D007571 ORTHO05D009439 2.8e-14 82.4 105 46.7
Potri.009G086400 Populus trichocarpa HOM05D007571 ORTHO05D009439 4.8e-14 81.6 85 58.8
SGA_v2.0_scaffold62G21311 Striga asiatica HOM05D007002 ORTHO05D008602 1.1e-13 80.5 59 69.5
AagrBONN_evm.TU.Sc2ySwM_228.3762 Anthoceros agrestis HOM05D007571 ORTHO05D009439 1.8e-13 79.7 66 59.1
CBR_g6736 Chara braunii HOM05D007571 ORTHO05D009439 8.5e-11 70.9 65 53.8
SalBow6G2452 Salvia bowleyana HOM05D007571 ORTHO05D009439 2.1e-09 66.2 66 56.1
Pp3c17_8360 Physcomitrium patens HOM05D007571 ORTHO05D009439 2.6e-07 59.3 108 39.8
Cre02.g086100 Chlamydomonas reinhardtii HOM05D007571 ORTHO05D009439 2.8e-06 55.8 72 40.3


User provided reference genes

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