Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p028990 Quercus lobata HOM05D001051 ORTHO05D036759 5.1e-56 220.7 101 100.0
QL02p096683 Quercus lobata HOM05D001051 ORTHO05D000886 4.7e-17 91.3 50 86.0
GSVIVG01029107001 Vitis vinifera HOM05D001051 ORTHO05D000886 3.3e-15 85.1 95 52.6
Oeu058835.1 Olea europaea HOM05D001051 ORTHO05D000886 7.0e-13 77.4 61 60.7
MD00G1017500 Malus domestica HOM05D002382 ORTHO05D002622 1.9e-10 69.3 73 49.3
MD07G1300100 Malus domestica HOM05D002382 ORTHO05D002622 3.2e-10 68.6 92 42.4
TAR625G1493 Trochodendron aralioides HOM05D001051 ORTHO05D000886 7.2e-10 67.4 66 53.0
Medtr3g034680 Medicago truncatula HOM05D001051 ORTHO05D036759 1.6e-09 66.2 72 52.8
Nn1g03394 Nelumbo nucifera HOM05D001051 ORTHO05D000886 1.6e-09 66.2 68 48.5
Sabra06G0133100 Salix brachista HOM05D001051 ORTHO05D000886 4.0e-08 61.6 51 56.9
Zm00001eb233790 Zea mays HOM05D001051 ORTHO05D000886 2.6e-07 58.9 63 46.0
Os02g0178100 Oryza sativa ssp. japonica HOM05D001051 ORTHO05D000886 9.7e-07 57.0 53 50.9
Nitab4.5_0000244g0130 Nicotiana tabacum HOM05D001051 ORTHO05D000886 1.3e-06 56.6 37 64.9
DCAR_026289 Daucus carota HOM05D001051 ORTHO05D000886 1.7e-06 56.2 82 36.6
Rhsim01G0008900 Rhododendron simsii HOM05D001051 ORTHO05D000886 1.7e-06 56.2 62 43.5
Rhsim01G0010700 Rhododendron simsii HOM05D001051 ORTHO05D000886 1.7e-06 56.2 62 43.5
Migut.H00566 Erythranthe guttata HOM05D001051 ORTHO05D000886 2.2e-06 55.8 92 34.8
Ciclev10008366m.g Citrus clementina HOM05D001051 ORTHO05D000886 2.8e-06 55.5 46 58.7
Gohir.A08G022000 Gossypium hirsutum HOM05D001051 ORTHO05D000886 4.8e-06 54.7 41 58.5
Gohir.D08G032600 Gossypium hirsutum HOM05D001051 ORTHO05D000886 4.8e-06 54.7 41 58.5
Gorai.004G030300 Gossypium raimondii HOM05D001051 ORTHO05D000886 4.8e-06 54.7 41 58.5
Potri.006G173600 Populus trichocarpa HOM05D001051 ORTHO05D000886 4.8e-06 54.7 61 49.2
Sabra18G0082900 Salix brachista HOM05D001051 ORTHO05D000886 4.8e-06 54.7 57 50.9
Gorai.013G246000 Gossypium raimondii HOM05D001051 ORTHO05D000886 6.3e-06 54.3 60 46.7
Ah.16g100740 Amaranthus hybridus HOM05D001051 ORTHO05D000886 8.2e-06 53.9 46 52.2
Cfa013529 Carpinus fangiana HOM05D001051 ORTHO05D000886 8.2e-06 53.9 134 32.1


User provided reference genes

Program Settings