Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p027340 Quercus lobata HOM05D002559 ORTHO05D007057 8.4e-32 139.8 74 100.0
QL05p033446 Quercus lobata HOM05D002559 ORTHO05D007057 2.3e-13 78.6 41 100.0
Cfa016430 Carpinus fangiana HOM05D002559 ORTHO05D007057 2.1e-11 72.0 41 85.4
CiPaw.09G000700 Carya illinoinensis HOM05D002559 ORTHO05D007057 9.0e-10 66.6 41 80.5
Duzib128G1749 Durio zibethinus HOM05D002559 ORTHO05D007057 2.6e-09 65.1 41 80.5
DCAR_019888 Daucus carota HOM05D002559 ORTHO05D007057 3.4e-09 64.7 42 85.7
Hma1.2p1_0183F.1_g080980 Hydrangea macrophylla HOM05D002559 ORTHO05D007057 4.5e-09 64.3 41 80.5
Manes.08G148900 Manihot esculenta HOM05D002559 ORTHO05D007057 4.5e-09 64.3 41 85.4
TWI32G0130 Tripterygium wilfordii HOM05D002559 ORTHO05D007057 5.8e-09 63.9 41 82.9
Duzib177G0252 Durio zibethinus HOM05D002559 ORTHO05D007057 7.6e-09 63.5 41 80.5
Prupe.1G559200 Prunus persica HOM05D002559 ORTHO05D007057 1.0e-08 63.2 41 80.5
Potri.001G023000 Populus trichocarpa HOM05D002559 ORTHO05D007057 1.3e-08 62.8 41 80.5
Rhsim04G0086200 Rhododendron simsii HOM05D002559 ORTHO05D007057 1.7e-08 62.4 42 81.0
ECA248G1300 Erigeron canadensis HOM05D002559 ORTHO05D007057 2.9e-08 61.6 41 75.6
MD12G1001600 Malus domestica HOM05D002559 ORTHO05D007057 2.9e-08 61.6 41 78.0
Manes.07G112700 Manihot esculenta HOM05D002559 ORTHO05D007057 2.9e-08 61.6 41 82.9
Actinidia17309 Actinidia chinensis HOM05D002559 ORTHO05D007057 3.8e-08 61.2 42 81.0
Thecc.05G254500 Theobroma cacao HOM05D002559 ORTHO05D007057 3.8e-08 61.2 41 78.0
FvH4_5g23840 Fragaria vesca HOM05D002559 ORTHO05D007057 4.9e-08 60.8 42 78.6
RcHm_v2.0_Chr7g0213231 Rosa chinensis HOM05D002559 ORTHO05D007057 4.9e-08 60.8 42 78.6
FAN13G0924 Fragaria x ananassa HOM05D002559 ORTHO05D007057 6.5e-08 60.5 42 78.6
MD14G1001500 Malus domestica HOM05D002559 ORTHO05D007057 1.1e-07 59.7 41 78.0
MBI13_g37425_MAGBIO Magnolia biondii HOM05D002559 ORTHO05D007057 2.5e-07 58.5 41 75.6
RcHm_v2.0_Chr1g0332111 Rosa chinensis HOM05D002559 ORTHO05D007057 2.5e-07 58.5 49 67.3
TAR369G0085 Trochodendron aralioides HOM05D002559 ORTHO05D007057 3.2e-07 58.2 42 73.8
Nitab4.5_0002741g0030 Nicotiana tabacum HOM05D002559 ORTHO05D007057 5.5e-07 57.4 42 76.2
Nn7g35814 Nelumbo nucifera HOM05D002559 ORTHO05D007057 9.3e-07 56.6 43 76.7
PGR042G3247 Punica granatum HOM05D002559 ORTHO05D007057 9.3e-07 56.6 43 76.7
HanXRQChr01g0024871 Helianthus annuus HOM05D002559 ORTHO05D007057 1.2e-06 56.2 42 73.8
Peaxi162Scf00076g00818 Petunia axillaris HOM05D002559 ORTHO05D007057 1.2e-06 56.2 42 76.2
Phvul.011G094200 Phaseolus vulgaris HOM05D002559 ORTHO05D007057 2.1e-06 55.5 41 75.6
TWI60G1607 Tripterygium wilfordii HOM05D002559 ORTHO05D007057 2.1e-06 55.5 41 70.7
CSS0010834 Camellia sinensis var. sinensis HOM05D002559 ORTHO05D007057 2.7e-06 55.1 42 71.4
Lj3g0010749 Lotus japonicus HOM05D002559 ORTHO05D007057 6.0e-06 53.9 41 73.2
Actinidia38620 Actinidia chinensis HOM05D002559 ORTHO05D007057 7.9e-06 53.5 40 75.0


User provided reference genes

Program Settings