Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p026900 Quercus lobata HOM05D007716 ORTHO05D009780 2.0e-86 322.4 165 100.0
CiPaw.05G026000 Carya illinoinensis HOM05D007716 ORTHO05D009780 2.3e-61 239.2 165 76.4
Haze_10368 Corylus avellana HOM05D007716 ORTHO05D009780 3.0e-61 238.8 165 76.4
Prupe.8G076600 Prunus persica HOM05D007716 ORTHO05D009780 3.3e-52 208.8 166 65.1
Manes.10G092200 Manihot esculenta HOM05D007716 ORTHO05D009780 1.7e-48 196.4 166 61.4
Potri.009G080400 Populus trichocarpa HOM05D007716 ORTHO05D009780 2.4e-47 192.6 164 63.4
Hma1.2p1_0703F.1_g206280 Hydrangea macrophylla HOM05D007716 ORTHO05D009780 4.1e-47 191.8 164 62.8
Sabra09G0062200 Salix brachista HOM05D007716 ORTHO05D009780 2.3e-45 186.0 164 61.6
Potri.001G286200 Populus trichocarpa HOM05D007716 ORTHO05D009780 8.6e-45 184.1 140 69.3
Cpa.g.sc20.53 Carica papaya HOM05D007716 ORTHO05D009780 7.3e-44 181.0 168 59.5
Sabra16G0178700 Salix brachista HOM05D007716 ORTHO05D009780 7.3e-44 181.0 165 61.8
Thecc.02G037300 Theobroma cacao HOM05D007716 ORTHO05D009780 1.4e-42 176.8 166 56.0
TWI23G0541 Tripterygium wilfordii HOM05D007716 ORTHO05D009780 3.1e-42 175.6 162 58.0
Ciclev10029299m.g Citrus clementina HOM05D007716 ORTHO05D009780 8.9e-42 174.1 170 57.1
TAR628G0805 Trochodendron aralioides HOM05D007716 ORTHO05D009780 2.0e-41 172.9 165 59.4
RcHm_v2.0_Chr6g0269271 Rosa chinensis HOM05D007716 ORTHO05D009780 2.6e-41 172.6 164 59.8
Gorai.008G042500 Gossypium raimondii HOM05D007716 ORTHO05D009780 4.4e-41 171.8 150 58.7
Duzib132G0367 Durio zibethinus HOM05D007716 ORTHO05D009780 7.6e-41 171.0 166 56.0
Gohir.D12G040700 Gossypium hirsutum HOM05D007716 ORTHO05D009780 1.3e-40 170.2 150 58.7
Nn5g29758 Nelumbo nucifera HOM05D007716 ORTHO05D009780 1.7e-40 169.9 164 56.7
PSO210G3893 Papaver somniferum HOM05D007716 ORTHO05D009780 1.7e-40 169.9 170 54.7
PSO761G0345 Papaver somniferum HOM05D007716 ORTHO05D009780 2.2e-40 169.5 170 54.7
Gohir.A12G031600 Gossypium hirsutum HOM05D007716 ORTHO05D009780 4.9e-40 168.3 150 58.7
COL.COLO4_17851 Corchorus olitorius HOM05D007716 ORTHO05D009780 1.2e-38 163.7 168 56.0
Oeu059885.1 Olea europaea HOM05D007716 ORTHO05D009780 4.6e-38 161.8 162 52.5
FAN15G0824 Fragaria x ananassa HOM05D007716 ORTHO05D009780 6.0e-38 161.4 166 54.8
Aqoxy6G00623 Aquilegia oxysepala HOM05D000043 ORTHO05D002888 3.0e-37 159.1 168 53.0
FAN20G1331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 6.6e-37 157.9 166 53.0
FAN24G2612 Fragaria x ananassa HOM05D007716 ORTHO05D009780 1.1e-36 157.1 166 52.4
FvH4_2g11070 Fragaria vesca HOM05D007716 ORTHO05D009780 1.5e-36 156.8 166 52.4
PGR142G1403 Punica granatum HOM05D007716 ORTHO05D009780 4.3e-36 155.2 157 51.6
Nitab4.5_0010352g0060 Nicotiana tabacum HOM05D007716 ORTHO05D009780 5.6e-36 154.8 120 61.7
ClCG10G009750 Citrullus lanatus HOM05D007716 ORTHO05D009780 7.3e-36 154.5 136 61.0
Atru.chr6.1374 Acer truncatum HOM05D007716 ORTHO05D009780 9.6e-36 154.1 169 54.4
Solyc01g106380.2 Solanum lycopersicum HOM05D007716 ORTHO05D009780 2.8e-35 152.5 149 54.4
FAN27G0331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 3.6e-35 152.1 165 52.7
Nitab4.5_0009020g0070 Nicotiana tabacum HOM05D007716 ORTHO05D009780 3.6e-35 152.1 120 60.0
PGSC0003DMG400003116 Solanum tuberosum HOM05D007716 ORTHO05D009780 3.6e-35 152.1 169 50.9
Cc02_g20520 Coffea canephora HOM05D007716 ORTHO05D009780 1.8e-34 149.8 160 51.9
Peaxi162Scf00299g00026 Petunia axillaris HOM05D007716 ORTHO05D009780 5.2e-34 148.3 124 60.5
Sopen01g048750 Solanum pennellii HOM05D007716 ORTHO05D009780 8.9e-34 147.5 129 58.1
MSTRG.16641 Avicennia marina HOM05D007716 ORTHO05D009780 2.6e-33 146.0 167 48.5
MD10G1057800 Malus domestica HOM05D007716 ORTHO05D009780 2.6e-33 146.0 127 58.3
Lalb_Chr20g0122741 Lupinus albus HOM05D007716 ORTHO05D009780 7.6e-33 144.4 151 51.0
Sed0024047 Sechium edule HOM05D007716 ORTHO05D009780 4.9e-32 141.7 150 52.7
CANSAT54G1223 Cannabis sativa HOM05D007716 ORTHO05D009780 6.4e-32 141.4 179 49.2
C03p61760 Brassica napus HOM05D007716 ORTHO05D009780 1.2e-30 137.1 126 58.7
BolC3t18437H Brassica oleracea HOM05D007716 ORTHO05D009780 1.2e-30 137.1 126 58.7
A06p31220 Brassica napus HOM05D007716 ORTHO05D009780 2.1e-30 136.3 128 57.8
vmacro01903 Vaccinium macrocarpon HOM05D001206 ORTHO05D002068 2.1e-30 136.3 109 63.3
THA.LOC104799649 Tarenaya hassleriana HOM05D007716 ORTHO05D009780 3.5e-30 135.6 127 53.5
BcaC01g02685 Brassica carinata HOM05D007716 ORTHO05D009780 4.6e-30 135.2 145 53.1
BraA06t26061Z Brassica rapa HOM05D007716 ORTHO05D009780 4.6e-30 135.2 128 57.0
Ca_00186_v3 Cicer arietinum L. HOM05D007716 ORTHO05D009780 1.3e-29 133.7 165 47.3
Lj6g0015505 Lotus japonicus HOM05D007716 ORTHO05D009780 3.0e-29 132.5 165 47.3
Sp2g27560 Schrenkiella parvula HOM05D007716 ORTHO05D009780 3.0e-29 132.5 127 56.7
AL8G41850 Arabidopsis lyrata HOM05D007716 ORTHO05D009780 3.9e-29 132.1 123 56.1
TPR.G32644 Trifolium pratense HOM05D007716 ORTHO05D009780 5.1e-29 131.7 165 49.7
Phvul.006G198900 Phaseolus vulgaris HOM05D007716 ORTHO05D009780 8.7e-29 131.0 149 49.7
CsaV3_4G014630 Cucumis sativus L. HOM05D007716 ORTHO05D009780 5.6e-28 128.3 135 54.8
Thhalv10004965m.g Eutrema salsugineum HOM05D007716 ORTHO05D009780 1.3e-27 127.1 130 55.4
AT5G64480 Arabidopsis thaliana HOM05D007716 ORTHO05D009780 3.6e-27 125.6 175 44.0
VMungo0540G1513 Vigna mungo HOM05D007716 ORTHO05D009780 3.6e-27 125.6 150 48.0
Psat1g212560 Pisum sativum HOM05D007716 ORTHO05D009780 4.8e-27 125.2 140 48.6
SalBow6G6774 Salvia bowleyana HOM05D007716 ORTHO05D009780 4.8e-27 125.2 169 42.0
CARHR278450 Cardamine hirsuta HOM05D007716 ORTHO05D009780 6.2e-27 124.8 175 44.0
Aa31LG1G17430 Aethionema arabicum HOM05D007716 ORTHO05D009780 1.1e-26 124.0 139 48.9
Glyma.15G060900 Glycine max HOM05D007716 ORTHO05D009780 1.1e-26 124.0 162 43.8
Carub.0008s2527 Capsella rubella HOM05D007716 ORTHO05D009780 1.4e-26 123.6 176 44.3
Migut.B00514 Erythranthe guttata HOM05D007716 ORTHO05D009780 1.8e-26 123.2 167 42.5
Actinidia02415 Actinidia chinensis HOM05D007716 ORTHO05D009780 2.4e-26 122.9 129 55.8
Glyma.13G254000 Glycine max HOM05D007716 ORTHO05D009780 2.4e-26 122.9 165 44.8
AUR62027073 Chenopodium quinoa HOM05D007716 ORTHO05D009780 1.5e-25 120.2 174 43.7
MBI16_g17833_MAGBIO Magnolia biondii HOM05D007716 ORTHO05D009780 1.5e-25 120.2 152 47.4
Eucgr.I02564 Eucalyptus grandis HOM05D007716 ORTHO05D009780 2.0e-25 119.8 166 44.0
Lsat_1_v5_gn_7_83180 Lactuca sativa HOM05D007716 ORTHO05D009780 2.0e-25 119.8 130 44.6
AUR62043644 Chenopodium quinoa HOM05D007716 ORTHO05D009780 3.4e-25 119.0 174 43.1
arahy.Tifrunner.gnm1.ann1.1SXR49 Arachis hypogaea HOM05D007716 ORTHO05D009780 4.5e-25 118.6 174 40.2
arahy.Tifrunner.gnm1.ann1.84YYIV Arachis hypogaea HOM05D007716 ORTHO05D009780 1.3e-24 117.1 151 44.4
Sc14g0003580 Simmondsia chinensis HOM05D007716 ORTHO05D009780 1.7e-24 116.7 143 47.6
Medtr2g010200 Medicago truncatula HOM05D007716 ORTHO05D009780 2.9e-24 115.9 163 44.2
SGA_v2.0_scaffold342G49411 Striga asiatica HOM05D007716 ORTHO05D009780 2.9e-24 115.9 152 44.1
DCAR_029284 Daucus carota HOM05D007716 ORTHO05D009780 1.1e-23 114.0 128 48.4
Ah.01g024230 Amaranthus hybridus HOM05D007716 ORTHO05D009780 7.1e-23 111.3 169 39.1
ECA236G5147 Erigeron canadensis HOM05D007716 ORTHO05D009780 7.1e-23 111.3 106 50.0
unitig_61.g26045 Utricularia gibba HOM05D007716 ORTHO05D009780 6.0e-22 108.2 167 39.5
CDE04G3440 Ceratophyllum demersum HOM05D000620 ORTHO05D000537 3.0e-21 105.9 161 38.5
Dinv08960 Davidia involucrata HOM05D007716 ORTHO05D009780 3.9e-21 105.5 68 72.1
Eucgr.I02552 Eucalyptus grandis HOM05D007716 ORTHO05D009780 4.0e-18 95.5 134 42.5
Peaxi162Scf00299g00025 Petunia axillaris HOM05D007716 ORTHO05D009780 6.4e-16 88.2 64 62.5
Lj9P341T42 Lonicera japonica HOM05D007716 ORTHO05D009780 1.1e-15 87.4 70 57.1
ATR0767G063 Amborella trichopoda HOM05D007716 ORTHO05D009780 1.4e-15 87.0 110 40.9
TAR376G1104 Trochodendron aralioides HOM05D007716 ORTHO05D009780 1.2e-14 84.0 72 58.3
Actinidia23910 Actinidia chinensis HOM05D001242 ORTHO05D001089 5.1e-13 78.6 48 77.1
ATR0144G021 Amborella trichopoda HOM05D007716 ORTHO05D009780 7.9e-06 54.7 63 44.4


User provided reference genes

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