Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p026859 Quercus lobata HOM05D061260 ORTHO05D009743 1.2e-263 912.5 440 100.0
QL11p026821 Quercus lobata HOM05D061260 ORTHO05D009743 4.6e-194 681.4 389 85.9
QL11p051711 Quercus lobata HOM05D010066 ORTHO05D009743 6.2e-66 255.8 407 41.0
QL11p018809 Quercus lobata HOM05D041046 ORTHO05D021181 4.8e-42 176.4 420 33.8
QL11p045102 Quercus lobata HOM05D010066 ORTHO05D009743 4.5e-40 169.9 327 35.2
QL11p050365 Quercus lobata HOM05D010066 ORTHO05D009743 1.3e-39 168.3 355 33.2
QL09p047090 Quercus lobata HOM05D041046 ORTHO05D021181 3.6e-37 160.2 402 32.6
QL11p054840 Quercus lobata HOM05D000002 ORTHO05D000001 2.0e-35 154.5 291 33.3
QL01p003691 Quercus lobata HOM05D010066 ORTHO05D009743 3.9e-28 130.2 366 31.1
QL11p056498 Quercus lobata HOM05D010066 ORTHO05D009743 4.4e-27 126.7 363 30.6
QL11p019943 Quercus lobata HOM05D010066 ORTHO05D009743 4.1e-25 120.2 410 28.3
QL05p053761 Quercus lobata HOM05D010066 ORTHO05D016816 1.2e-24 118.6 339 29.2
QL11p033269 Quercus lobata HOM05D010066 ORTHO05D009743 3.8e-23 113.6 348 29.3
QL11p036410 Quercus lobata HOM05D010066 ORTHO05D009743 1.1e-22 112.1 394 27.7
Cfa003918 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.5e-22 111.7 310 28.7
QL11p042411 Quercus lobata HOM05D025344 ORTHO05D009743 5.5e-22 109.8 362 27.1
QL11p042465 Quercus lobata HOM05D025344 ORTHO05D009743 5.5e-22 109.8 374 26.7
QL11p003115 Quercus lobata HOM05D010066 ORTHO05D009743 3.6e-21 107.1 350 26.0
Cfa014784 Carpinus fangiana HOM05D008391 ORTHO05D009743 6.1e-21 106.3 365 27.7
QL11p036388 Quercus lobata HOM05D010066 ORTHO05D009743 1.8e-20 104.8 317 29.3
Haze_19938 Corylus avellana HOM05D008391 ORTHO05D009743 1.2e-16 92.0 337 26.7
QL11p055815 Quercus lobata HOM05D025344 ORTHO05D021181 2.7e-16 90.9 287 27.2
QL11p050103 Quercus lobata HOM05D010066 ORTHO05D009743 4.5e-16 90.1 278 26.6
Haze_21168 Corylus avellana HOM05D008391 ORTHO05D009743 5.9e-16 89.7 377 23.6
Dinv35658 Davidia involucrata HOM05D013363 ORTHO05D015094 5.0e-15 86.7 247 30.4
CSS0001088 Camellia sinensis var. sinensis HOM05D012885 ORTHO05D010877 7.2e-14 82.8 217 27.6
Haze_19712 Corylus avellana HOM05D008391 ORTHO05D009743 8.0e-13 79.3 193 30.1
Dinv28168 Davidia involucrata HOM05D011324 ORTHO05D013448 1.8e-12 78.2 219 28.3
QL11p055392 Quercus lobata HOM05D010066 ORTHO05D009743 1.8e-12 78.2 134 35.8
Dinv25052 Davidia involucrata HOM05D011324 ORTHO05D013448 3.0e-12 77.4 166 30.1
Dinv28165 Davidia involucrata HOM05D011324 ORTHO05D013448 2.6e-11 74.3 270 26.7
QL12p034051 Quercus lobata HOM05D000329 ORTHO05D000833 2.6e-11 74.3 52 71.2
CSS0022059 Camellia sinensis var. sinensis HOM05D013052 ORTHO05D000378 7.5e-11 72.8 227 28.6
CSS0029553 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 9.8e-11 72.4 199 29.1
Dinv28164 Davidia involucrata HOM05D011324 ORTHO05D013448 9.8e-11 72.4 223 26.5
Dinv28172 Davidia involucrata HOM05D011324 ORTHO05D013448 9.8e-11 72.4 216 29.6
Dinv25049 Davidia involucrata HOM05D011324 ORTHO05D013448 1.7e-10 71.6 113 38.1
Dinv28167 Davidia involucrata HOM05D011324 ORTHO05D013448 2.2e-10 71.2 211 26.1
Haze_19844 Corylus avellana HOM05D027064 ORTHO05D009743 2.8e-10 70.9 309 21.7
Haze_19708 Corylus avellana HOM05D008391 ORTHO05D009743 3.7e-10 70.5 223 28.7
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 1.8e-09 68.2 205 30.7
Dinv35631 Davidia involucrata HOM05D013363 ORTHO05D015094 1.8e-09 68.2 216 28.2
Hund00487 Selenicereus undatus HOM05D064078 ORTHO05D012831 1.8e-09 68.2 205 26.3
Dinv01717 Davidia involucrata HOM05D011324 ORTHO05D013448 2.4e-09 67.8 267 25.5
COL.COLO4_31291 Corchorus olitorius HOM05D017380 ORTHO05D019049 5.4e-09 66.6 121 32.2
QL12p033243 Quercus lobata HOM05D000329 ORTHO05D000833 7.0e-09 66.2 44 75.0
Haze_14137 Corylus avellana HOM05D008391 ORTHO05D009743 1.2e-08 65.5 313 25.6
Rhsim03G0231000 Rhododendron simsii HOM05D018081 ORTHO05D026100 1.2e-08 65.5 194 26.3
AT4G39756 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 1.6e-08 65.1 184 24.5
Dinv28162 Davidia involucrata HOM05D011324 ORTHO05D013448 2.0e-08 64.7 54 48.1
QL11p055520 Quercus lobata HOM05D025344 ORTHO05D009743 2.0e-08 64.7 252 27.0
Rhsim07G0232100 Rhododendron simsii HOM05D010628 ORTHO05D010877 2.7e-08 64.3 384 22.9
AL7G11590 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 7.7e-08 62.8 97 33.0
Dinv28170 Davidia involucrata HOM05D011324 ORTHO05D013448 1.0e-07 62.4 54 46.3
COL.COLO4_31615 Corchorus olitorius HOM05D052704 ORTHO05D044704 1.7e-07 61.6 102 32.4
C01p00590 Brassica napus HOM05D000249 ORTHO05D000206 3.8e-07 60.5 57 42.1
Haze_19703 Corylus avellana HOM05D008391 ORTHO05D009743 3.8e-07 60.5 184 29.9
CARHR247150 Cardamine hirsuta HOM05D000249 ORTHO05D000206 5.0e-07 60.1 57 42.1
CARHR225340 Cardamine hirsuta HOM05D000249 ORTHO05D000206 1.5e-06 58.5 101 31.7
BcaNung05811 Brassica carinata HOM05D000249 ORTHO05D000206 2.5e-06 57.8 85 34.1
BolC1t00060H Brassica oleracea HOM05D000249 ORTHO05D000206 2.5e-06 57.8 85 34.1
A08p23270 Brassica napus HOM05D000249 ORTHO05D000206 4.2e-06 57.0 136 29.4
Sp7g36330 Schrenkiella parvula HOM05D000249 ORTHO05D000206 4.2e-06 57.0 133 28.6
Hund00506 Selenicereus undatus HOM05D064078 ORTHO05D012831 4.2e-06 57.0 98 33.7
Aqoxy7G03143 Aquilegia oxysepala HOM05D008418 ORTHO05D011146 5.5e-06 56.6 138 26.1
AL7G11960 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 5.5e-06 56.6 91 31.9
AT4G39753 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 5.5e-06 56.6 58 43.1
BcaNung00910 Brassica carinata HOM05D000249 ORTHO05D000206 5.5e-06 56.6 99 35.4
C01p00900 Brassica napus HOM05D000249 ORTHO05D000206 5.5e-06 56.6 99 35.4
BolC1t00091H Brassica oleracea HOM05D000249 ORTHO05D000206 5.5e-06 56.6 99 35.4
Carub.0007s0142 Capsella rubella HOM05D000249 ORTHO05D000206 5.5e-06 56.6 90 36.7
Thhalv10029143m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 5.5e-06 56.6 112 28.6
Ah.01g016270 Amaranthus hybridus HOM05D036488 ORTHO05D021181 7.2e-06 56.2 58 43.1
Ah.01g016360 Amaranthus hybridus HOM05D036488 ORTHO05D021181 7.2e-06 56.2 58 43.1
Ah.01g016440 Amaranthus hybridus HOM05D036488 ORTHO05D021181 7.2e-06 56.2 58 43.1
AT4G35120 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 7.2e-06 56.2 70 40.0
A01p00450 Brassica napus HOM05D000249 ORTHO05D000206 7.2e-06 56.2 116 27.6
BraA01t00052Z Brassica rapa HOM05D000249 ORTHO05D000206 7.2e-06 56.2 116 27.6
Carub.0007s0144 Capsella rubella HOM05D000249 ORTHO05D000206 7.2e-06 56.2 87 33.3
AL7G13600 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 9.4e-06 55.8 105 32.4
BcaNung05812 Brassica carinata HOM05D000249 ORTHO05D000206 9.4e-06 55.8 113 30.1
A01p11270 Brassica napus HOM05D000249 ORTHO05D000206 9.4e-06 55.8 117 30.8
A08p14570 Brassica napus HOM05D000249 ORTHO05D000206 9.4e-06 55.8 59 40.7
C03p82270 Brassica napus HOM05D000249 ORTHO05D000206 9.4e-06 55.8 59 40.7
BolC1t00061H Brassica oleracea HOM05D000249 ORTHO05D000206 9.4e-06 55.8 113 30.1
BolC3t20525H Brassica oleracea HOM05D000249 ORTHO05D000206 9.4e-06 55.8 59 40.7
BraA01t01072Z Brassica rapa HOM05D000249 ORTHO05D000206 9.4e-06 55.8 64 37.5
BraA01t01074Z Brassica rapa HOM05D000249 ORTHO05D000206 9.4e-06 55.8 117 29.9
BraA08t33443Z Brassica rapa HOM05D000249 ORTHO05D000206 9.4e-06 55.8 59 40.7
CSS0045488 Camellia sinensis var. sinensis HOM05D018855 ORTHO05D012831 9.4e-06 55.8 191 28.3
Carub.0007s0257 Capsella rubella HOM05D000249 ORTHO05D000206 9.4e-06 55.8 93 31.2


User provided reference genes

Program Settings