Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 0.0e+00 2546.2 1268 100.0
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 0.0e+00 2350.9 1266 91.6
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 2350.5 1266 91.9
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 0.0e+00 2312.7 1267 90.5
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 0.0e+00 2308.9 1268 89.0
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 0.0e+00 2296.9 1268 89.5
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 0.0e+00 2290.8 1268 89.0
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 0.0e+00 2281.1 1261 88.8
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 0.0e+00 2275.0 1261 88.7
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 0.0e+00 2273.8 1266 88.7
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 0.0e+00 2272.7 1267 88.4
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2268.8 1267 87.7
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 0.0e+00 2268.4 1269 87.7
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 0.0e+00 2266.5 1267 88.0
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 0.0e+00 2266.1 1268 88.3
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 0.0e+00 2263.4 1267 87.7
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2261.9 1267 88.2
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 0.0e+00 2261.1 1267 87.6
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2258.0 1267 88.2
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2257.6 1267 87.5
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 0.0e+00 2255.3 1269 86.9
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 0.0e+00 2249.6 1268 87.6
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2248.4 1269 86.7
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2246.1 1269 86.4
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2244.2 1268 87.5
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 0.0e+00 2242.2 1267 86.9
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2241.1 1268 87.4
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2238.0 1268 87.1
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 2235.3 1268 86.3
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2233.0 1261 87.5
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 0.0e+00 2233.0 1263 86.9
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 0.0e+00 2229.1 1267 85.9
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 0.0e+00 2228.8 1268 86.4
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 0.0e+00 2227.6 1270 85.6
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 0.0e+00 2226.1 1268 86.1
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 0.0e+00 2225.3 1266 85.5
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2223.7 1266 85.9
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 0.0e+00 2222.6 1266 85.8
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 0.0e+00 2220.7 1266 85.5
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 0.0e+00 2218.7 1270 85.6
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 0.0e+00 2216.8 1266 85.4
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 0.0e+00 2216.4 1266 84.8
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 0.0e+00 2216.4 1265 85.6
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 0.0e+00 2215.7 1270 85.7
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 0.0e+00 2215.3 1267 85.5
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 0.0e+00 2214.9 1267 85.6
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 0.0e+00 2214.9 1271 85.3
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2213.3 1266 84.7
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 0.0e+00 2213.3 1266 84.6
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 0.0e+00 2213.0 1266 85.5
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 0.0e+00 2212.6 1267 85.3
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 0.0e+00 2212.2 1266 85.1
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2212.2 1266 84.6
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2211.4 1268 85.8
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2211.0 1268 85.2
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2210.3 1268 85.5
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 0.0e+00 2210.3 1265 85.3
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 0.0e+00 2209.9 1274 85.6
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 0.0e+00 2207.9 1266 86.7
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 0.0e+00 2207.2 1267 85.2
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2206.4 1238 87.6
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 0.0e+00 2206.4 1267 84.8
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2205.6 1268 85.3
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2203.7 1268 85.6
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2203.3 1268 86.3
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2202.9 1268 84.9
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2202.2 1268 85.2
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 0.0e+00 2202.2 1270 85.1
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 0.0e+00 2196.8 1267 85.8
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2194.1 1269 84.7
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 2188.3 1270 84.3
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 2187.1 1207 89.5
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2184.5 1271 83.9
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 2182.5 1266 84.0
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 0.0e+00 2182.1 1266 84.4
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 0.0e+00 2180.6 1249 85.5
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 0.0e+00 2174.4 1267 84.1
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 0.0e+00 2173.3 1265 84.0
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 0.0e+00 2167.5 1267 84.5
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 0.0e+00 2167.5 1249 85.7
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 0.0e+00 2164.8 1268 84.2
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 0.0e+00 2163.7 1270 84.2
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 2147.5 1270 83.1
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 0.0e+00 2141.7 1267 83.8
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 0.0e+00 2130.5 1263 83.3
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 0.0e+00 2125.5 1276 82.9
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 0.0e+00 2122.1 1266 81.8
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2111.3 1272 80.9
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 0.0e+00 2086.6 1268 80.4
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2082.0 1268 81.6
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 0.0e+00 2081.2 1270 81.1
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 0.0e+00 2079.7 1267 81.1
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2040.4 1267 80.3
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2010.0 1160 85.5
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 0.0e+00 1969.1 1268 77.0
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 0.0e+00 1959.5 1271 75.5
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1922.9 1272 74.7
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 1889.4 1069 85.1
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 0.0e+00 1887.8 1283 73.0
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1877.4 1192 77.9
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 0.0e+00 1876.7 1089 84.7
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 0.0e+00 1850.9 1247 73.9
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 0.0e+00 1841.2 1266 72.5
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 1829.3 1268 73.4
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1828.9 1267 73.6
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 0.0e+00 1812.0 1130 80.2
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 1669.1 965 83.5
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 0.0e+00 1551.2 1322 61.1
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 0.0e+00 1550.8 1050 73.3
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 0.0e+00 1405.6 1266 60.8
Oeu029564.1 Olea europaea HOM05D001937 ORTHO05D007024 0.0e+00 1400.6 813 84.0
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 1335.5 1330 54.0
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 0.0e+00 1311.6 1393 53.1
TAR636G0878 Trochodendron aralioides HOM05D001937 ORTHO05D007024 0.0e+00 1297.7 724 87.2
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 1190.6 1042 62.3
Dinv02208 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 1172.9 810 75.2
Dinv10935 Davidia involucrata HOM05D001937 ORTHO05D007024 3.4e-274 949.1 570 82.1
TAR636G1691 Trochodendron aralioides HOM05D001937 ORTHO05D007024 4.9e-265 918.7 502 91.4
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 1.5e-258 897.1 1243 42.0
CBR_g26054 Chara braunii HOM05D000019 ORTHO05D000002 5.3e-227 792.3 680 59.9
MD02G1239500 Malus domestica HOM05D001937 ORTHO05D007024 3.4e-226 789.6 529 76.0
TAR636G2433 Trochodendron aralioides HOM05D001937 ORTHO05D007024 8.2e-212 741.9 455 82.0
TAR636G1243 Trochodendron aralioides HOM05D001937 ORTHO05D007024 3.4e-189 666.8 389 87.9
CBR_g26059 Chara braunii HOM05D001937 ORTHO05D007024 9.3e-131 472.6 359 68.2
Potri.017G124400 Populus trichocarpa HOM05D001937 ORTHO05D007024 4.1e-126 457.2 313 76.4
Lalb_Chr16g0382841 Lupinus albus HOM05D001937 ORTHO05D007024 8.8e-113 412.9 270 77.8
Oeu061583.3 Olea europaea HOM05D001937 ORTHO05D007024 3.0e-81 308.1 479 43.0
SalBow2G0807 Salvia bowleyana HOM05D001937 ORTHO05D007024 7.5e-72 276.9 169 76.9
SalBow1G2752 Salvia bowleyana HOM05D001937 ORTHO05D007024 2.4e-70 271.9 169 76.3
SalBow1G1280 Salvia bowleyana HOM05D001937 ORTHO05D007024 9.2e-70 270.0 169 75.7
HPP92_019823 Vanilla planifolia HOM05D001937 ORTHO05D007024 1.7e-63 249.2 138 90.6
ECA234G0635 Erigeron canadensis HOM05D001937 ORTHO05D007024 8.6e-60 236.9 234 56.4
TAR636G3286 Trochodendron aralioides HOM05D001937 ORTHO05D043971 2.1e-50 205.7 117 82.1
HPP92_019822 Vanilla planifolia HOM05D001937 ORTHO05D007024 2.8e-42 178.7 152 65.8
TAR636G2347 Trochodendron aralioides HOM05D001937 ORTHO05D007024 5.3e-41 174.5 91 89.0
ECA234G4540 Erigeron canadensis HOM05D016619 ORTHO05D007024 1.2e-37 163.3 182 53.8
CBR_g39219 Chara braunii HOM05D001937 ORTHO05D043971 9.0e-33 147.1 101 66.3
HPP92_019824 Vanilla planifolia HOM05D001937 ORTHO05D007024 1.1e-27 130.2 104 63.5


User provided reference genes

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