Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p022534 Quercus lobata HOM05D008849 ORTHO05D010556 2.8e-78 295.0 135 100.0
QL11p023932 Quercus lobata HOM05D008849 ORTHO05D010556 2.7e-36 155.6 120 61.7
CiPaw.02G127100 Carya illinoinensis HOM05D008849 ORTHO05D010556 3.0e-35 152.1 128 54.7
CiPaw.16G074900 Carya illinoinensis HOM05D008849 ORTHO05D010556 2.5e-34 149.1 128 51.6
CiPaw.01G204700 Carya illinoinensis HOM05D008849 ORTHO05D010556 1.6e-33 146.4 137 51.8
Sabra03G0128300 Salix brachista HOM05D008849 ORTHO05D010556 3.1e-32 142.1 135 47.4
Potri.001G053200 Populus trichocarpa HOM05D008849 ORTHO05D010556 6.4e-30 134.4 135 45.9
Thecc.04G213000 Theobroma cacao HOM05D008849 ORTHO05D010556 8.4e-30 134.0 125 48.0
Potri.003G175000 Populus trichocarpa HOM05D008849 ORTHO05D010556 1.4e-29 133.3 135 44.4
RcHm_v2.0_Chr4g0396831 Rosa chinensis HOM05D008849 ORTHO05D010556 2.4e-29 132.5 129 47.3
FvH4_4g05650 Fragaria vesca HOM05D008849 ORTHO05D010556 9.3e-29 130.6 132 47.7
Cfa014873 Carpinus fangiana HOM05D008849 ORTHO05D010556 3.5e-28 128.6 135 44.4
FAN17G1524 Fragaria x ananassa HOM05D008849 ORTHO05D010556 4.6e-28 128.3 132 44.7
Atru.chr4.1805 Acer truncatum HOM05D008849 ORTHO05D010556 6.6e-27 124.4 132 42.4
Gorai.011G162700 Gossypium raimondii HOM05D008849 ORTHO05D010556 1.9e-26 122.9 125 44.0
Gohir.A10G120800 Gossypium hirsutum HOM05D008849 ORTHO05D010556 5.6e-26 121.3 125 41.6
Ciclev10007007m.g Citrus clementina HOM05D008849 ORTHO05D010556 4.8e-25 118.2 112 45.5
Potri.003G175100 Populus trichocarpa HOM05D008849 ORTHO05D010556 1.8e-24 116.3 134 43.3
Gohir.D10G145500 Gossypium hirsutum HOM05D008849 ORTHO05D010556 4.5e-23 111.7 95 47.4
Potri.002G263900 Populus trichocarpa HOM05D008849 ORTHO05D010556 1.7e-22 109.8 133 41.4
Gohir.D09G196100 Gossypium hirsutum HOM05D008849 ORTHO05D010556 2.7e-20 102.4 127 36.2
Gorai.006G219500 Gossypium raimondii HOM05D008849 ORTHO05D010556 2.7e-20 102.4 127 36.2
Sabra03G0128400 Salix brachista HOM05D005430 ORTHO05D007814 3.5e-20 102.1 110 40.9
Gohir.A09G202100 Gossypium hirsutum HOM05D008849 ORTHO05D010556 4.6e-20 101.7 127 36.2
Eucgr.E01057 Eucalyptus grandis HOM05D008849 ORTHO05D010556 7.9e-20 100.9 103 38.8
COL.COLO4_26204 Corchorus olitorius HOM05D008849 ORTHO05D010556 1.0e-19 100.5 134 38.8
RcHm_v2.0_Chr4g0396821 Rosa chinensis HOM05D008849 ORTHO05D010556 1.9e-18 96.3 109 39.4
GSVIVG01012794001 Vitis vinifera HOM05D008849 ORTHO05D010556 4.3e-18 95.1 102 40.2
QL04p034676 Quercus lobata HOM05D008849 ORTHO05D010556 5.6e-18 94.7 126 35.7
Manes.15G049200 Manihot esculenta HOM05D008849 ORTHO05D010556 2.8e-17 92.4 103 35.9
Eucgr.H00100 Eucalyptus grandis HOM05D008849 ORTHO05D010556 6.2e-17 91.3 103 35.0
FAN17G2089 Fragaria x ananassa HOM05D008849 ORTHO05D010556 4.0e-16 88.6 129 37.2
Actinidia35944 Actinidia chinensis HOM05D008849 ORTHO05D010556 2.0e-15 86.3 105 39.0
COL.COLO4_34095 Corchorus olitorius HOM05D008849 ORTHO05D010556 2.6e-15 85.9 129 38.0
FvH4_4g05643 Fragaria vesca HOM05D008849 ORTHO05D010556 2.6e-15 85.9 129 36.4
Eucgr.H00101 Eucalyptus grandis HOM05D008849 ORTHO05D010556 4.2e-13 78.6 103 30.1
TPR.G17735 Trifolium pratense HOM05D014907 ORTHO05D010556 9.3e-13 77.4 130 33.8
Lalb_Chr18g0055471 Lupinus albus HOM05D014907 ORTHO05D010556 1.2e-12 77.0 131 29.8
Psat1g126640 Pisum sativum HOM05D014907 ORTHO05D010556 2.1e-12 76.3 129 32.6
Dinv27154 Davidia involucrata HOM05D062440 ORTHO05D010556 3.5e-12 75.5 111 34.2
Rhsim09G0049000 Rhododendron simsii HOM05D004546 ORTHO05D005419 3.5e-12 75.5 90 37.8
Cpa.g.sc12.57 Carica papaya HOM05D005430 ORTHO05D007814 1.0e-11 73.9 105 38.1
Glyma.13G218100 Glycine max HOM05D014907 ORTHO05D010556 1.0e-11 73.9 127 34.6
RcHm_v2.0_Chr4g0396551 Rosa chinensis HOM05D005430 ORTHO05D000119 6.7e-11 71.2 112 33.0
Migut.G00604 Erythranthe guttata HOM05D005430 ORTHO05D007814 8.7e-11 70.9 107 34.6
Cpa.g.sc59.84 Carica papaya HOM05D031968 ORTHO05D010556 1.5e-10 70.1 104 32.7
Thecc.04G212800 Theobroma cacao HOM05D066189 ORTHO05D010556 5.6e-10 68.2 100 34.0
CAN.G2152.1 Capsicum annuum HOM05D000248 ORTHO05D000146 7.4e-10 67.8 122 32.8
CAN.G765.8 Capsicum annuum HOM05D000248 ORTHO05D000146 7.4e-10 67.8 122 32.8
RhsimUnG0234900 Rhododendron simsii HOM05D004546 ORTHO05D005419 2.1e-09 66.2 93 34.4
Medtr2g461570 Medicago truncatula HOM05D014907 ORTHO05D010556 6.2e-09 64.7 105 33.3
Thecc.04G213200 Theobroma cacao HOM05D005430 ORTHO05D007814 1.4e-08 63.5 140 29.3
SalBow2G0067 Salvia bowleyana HOM05D005430 ORTHO05D000119 1.8e-08 63.2 107 29.0
Cpa.g.sc59.83 Carica papaya HOM05D031968 ORTHO05D010556 2.4e-08 62.8 44 47.7
COL.COLO4_34093 Corchorus olitorius HOM05D066189 ORTHO05D010556 2.4e-08 62.8 127 33.1
Glyma.13G218125 Glycine max HOM05D014907 ORTHO05D010556 2.4e-08 62.8 132 32.6
Medtr8g041940 Medicago truncatula HOM05D018373 ORTHO05D020881 2.4e-08 62.8 133 29.3
Manes.15G049100 Manihot esculenta HOM05D005430 ORTHO05D007814 3.1e-08 62.4 108 31.5
RhsimUnG0181400 Rhododendron simsii HOM05D000256 ORTHO05D000119 3.1e-08 62.4 104 34.6
unitig_899.g15047 Utricularia gibba HOM05D000256 ORTHO05D000119 3.1e-08 62.4 110 32.7
Duzib212G0436 Durio zibethinus HOM05D005430 ORTHO05D007814 4.0e-08 62.0 141 28.4
unitig_899.g15044 Utricularia gibba HOM05D000256 ORTHO05D000119 4.0e-08 62.0 96 37.5
Glyma.16G075100 Glycine max HOM05D009801 ORTHO05D011967 5.3e-08 61.6 71 33.8
Lalb_Chr23g0276871 Lupinus albus HOM05D009801 ORTHO05D011967 5.3e-08 61.6 103 27.2
GSVIVG01029041001 Vitis vinifera HOM05D005430 ORTHO05D007814 6.9e-08 61.2 108 32.4
Cpa.g.sc59.81 Carica papaya HOM05D005430 ORTHO05D000119 9.0e-08 60.8 149 30.2
Thecc.04G213100 Theobroma cacao HOM05D005430 ORTHO05D007814 9.0e-08 60.8 127 29.1
Manes.03G153100 Manihot esculenta HOM05D005430 ORTHO05D007814 2.0e-07 59.7 108 30.6
Lsat_1_v5_gn_6_62741 Lactuca sativa HOM05D005430 ORTHO05D007814 2.6e-07 59.3 109 31.2
vmacro22823 Vaccinium macrocarpon HOM05D000256 ORTHO05D000119 2.6e-07 59.3 84 33.3
COL.COLO4_34097 Corchorus olitorius HOM05D005430 ORTHO05D007814 3.4e-07 58.9 112 28.6
Lalb_Chr15g0088741 Lupinus albus HOM05D005430 ORTHO05D007814 3.4e-07 58.9 118 30.5
Sopen05g031960 Solanum pennellii HOM05D000256 ORTHO05D000119 3.4e-07 58.9 101 32.7
Solyc03g025660.1 Solanum lycopersicum HOM05D000256 ORTHO05D000119 4.5e-07 58.5 114 34.2
Solyc05g053465.1 Solanum lycopersicum HOM05D000256 ORTHO05D000119 4.5e-07 58.5 114 30.7
Rhsim09G0045600 Rhododendron simsii HOM05D005430 ORTHO05D026106 5.8e-07 58.2 135 28.1
Oeu051793.1 Olea europaea HOM05D000256 ORTHO05D000119 1.0e-06 57.4 91 30.8
Potri.003G175200 Populus trichocarpa HOM05D005430 ORTHO05D007814 1.0e-06 57.4 108 29.6
Glyma.09G090600 Glycine max HOM05D009801 ORTHO05D011967 1.3e-06 57.0 76 36.8
Glyma.13G192300 Glycine max HOM05D009801 ORTHO05D011967 1.3e-06 57.0 76 36.8
Glyma.13G192500 Glycine max HOM05D009801 ORTHO05D011967 1.3e-06 57.0 76 36.8
Medtr6g007125 Medicago truncatula HOM05D018373 ORTHO05D020881 1.3e-06 57.0 99 30.3
CAN.G307.11 Capsicum annuum HOM05D000256 ORTHO05D000119 1.7e-06 56.6 141 28.4
Migut.F01732 Erythranthe guttata HOM05D000256 ORTHO05D000119 1.7e-06 56.6 107 29.0
HanXRQChr07g0185851 Helianthus annuus HOM05D005430 ORTHO05D007814 2.2e-06 56.2 109 30.3
TPR.G10407 Trifolium pratense HOM05D009801 ORTHO05D011967 2.2e-06 56.2 115 28.7
TWI73G0050 Tripterygium wilfordii HOM05D005430 ORTHO05D007814 2.2e-06 56.2 141 28.4
Glyma.03G088300 Glycine max HOM05D009801 ORTHO05D011967 4.9e-06 55.1 46 43.5
Dinv38286 Davidia involucrata HOM05D005430 ORTHO05D007814 6.5e-06 54.7 109 30.3
Lalb_Chr21g0307151 Lupinus albus HOM05D009801 ORTHO05D011967 6.5e-06 54.7 52 34.6
Sabra01G0037500 Salix brachista HOM05D006492 ORTHO05D008432 6.5e-06 54.7 108 29.6
Thhalv10003022m.g Eutrema salsugineum HOM05D005430 ORTHO05D007814 8.4e-06 54.3 109 30.3
MD13G1228600 Malus domestica HOM05D005430 ORTHO05D007814 8.4e-06 54.3 109 31.2
MD16G1234100 Malus domestica HOM05D005430 ORTHO05D007814 8.4e-06 54.3 109 27.5
Medtr3g023810 Medicago truncatula HOM05D009801 ORTHO05D011967 8.4e-06 54.3 80 33.8


User provided reference genes

Program Settings