Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p019060 Quercus lobata HOM05D005305 ORTHO05D006394 1.0e-155 553.5 318 100.0
CiPaw.05G041500 Carya illinoinensis HOM05D005305 ORTHO05D006394 8.5e-41 171.8 234 50.9
MD15G1420000 Malus domestica HOM05D005305 ORTHO05D006394 3.8e-33 146.4 273 41.8
Ca_00097_v3 Cicer arietinum L. HOM05D005305 ORTHO05D006394 1.1e-32 144.8 208 44.7
Ca_29935_v3 Cicer arietinum L. HOM05D005305 ORTHO05D006394 1.1e-32 144.8 208 44.7
TPR.G19715 Trifolium pratense HOM05D005305 ORTHO05D006394 7.2e-32 142.1 280 38.2
arahy.Tifrunner.gnm1.ann1.ZL3PAB Arachis hypogaea HOM05D005305 ORTHO05D006394 2.8e-31 140.2 242 45.5
Lj6g0020123 Lotus japonicus HOM05D005305 ORTHO05D006394 6.1e-31 139.0 271 38.4
VMungo0540G1828 Vigna mungo HOM05D005305 ORTHO05D006394 8.0e-31 138.7 255 39.2
ClCG09G014160 Citrullus lanatus HOM05D005305 ORTHO05D006394 1.0e-30 138.3 247 39.3
Medtr2g007870 Medicago truncatula HOM05D005305 ORTHO05D006394 1.4e-30 137.9 198 42.9
arahy.Tifrunner.gnm1.ann1.I1A2NR Arachis hypogaea HOM05D005305 ORTHO05D006394 1.8e-30 137.5 266 43.6
Phvul.006G211300 Phaseolus vulgaris HOM05D005305 ORTHO05D006394 2.3e-30 137.1 185 45.4
Prupe.1G566000 Prunus persica HOM05D005305 ORTHO05D006394 3.0e-30 136.7 277 42.6
MELO3C014385.2 Cucumis melo HOM05D005305 ORTHO05D006394 4.0e-30 136.3 278 38.5
Psat1g219600 Pisum sativum HOM05D005305 ORTHO05D006394 4.0e-30 136.3 258 37.6
Dinv19341 Davidia involucrata HOM05D005305 ORTHO05D006394 5.2e-30 136.0 339 34.5
Sed0001621 Sechium edule HOM05D005305 ORTHO05D006394 5.2e-30 136.0 266 39.8
Glyma.08G183700 Glycine max HOM05D005305 ORTHO05D006394 3.4e-29 133.3 304 35.2
CsaV3_6G037300 Cucumis sativus L. HOM05D005305 ORTHO05D006394 4.4e-29 132.9 279 37.3
RcHm_v2.0_Chr7g0223251 Rosa chinensis HOM05D005305 ORTHO05D006394 7.5e-29 132.1 290 39.7
Aqoxy6G00392 Aquilegia oxysepala HOM05D005305 ORTHO05D006394 1.1e-27 128.3 274 37.6
Ciclev10001162m.g Citrus clementina HOM05D005305 ORTHO05D006394 1.1e-27 128.3 284 37.3
Actinidia33832 Actinidia chinensis HOM05D005305 ORTHO05D006394 5.4e-27 125.9 220 40.9
Lj1C922T21 Lonicera japonica HOM05D005305 ORTHO05D006394 1.2e-26 124.8 280 35.7
Atru.chr6.974 Acer truncatum HOM05D005305 ORTHO05D006394 3.5e-26 123.2 211 42.7
Lalb_Chr15g0090581 Lupinus albus HOM05D005305 ORTHO05D006394 3.5e-26 123.2 212 41.5
FvH4_5g29740 Fragaria vesca HOM05D005305 ORTHO05D006394 1.7e-25 120.9 295 37.3
CSS0043111 Camellia sinensis var. sinensis HOM05D005305 ORTHO05D006394 2.3e-25 120.6 313 34.2
FAN04G1743 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.9e-25 120.2 295 37.3
FAN08G2621 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.9e-25 120.2 231 39.8
AT1G15190 Arabidopsis thaliana HOM05D005305 ORTHO05D006394 3.9e-25 119.8 288 35.4
Sed0003606 Sechium edule HOM05D005305 ORTHO05D006394 3.9e-25 119.8 239 38.9
BcaB02g06584 Brassica carinata HOM05D005305 ORTHO05D006394 1.1e-24 118.2 259 35.9
AL1G27270 Arabidopsis lyrata HOM05D005305 ORTHO05D006394 1.5e-24 117.9 286 34.6
FAN13G2550 Fragaria x ananassa HOM05D005305 ORTHO05D006394 4.3e-24 116.3 295 36.3
BraA06t24297Z Brassica rapa HOM05D005305 ORTHO05D006394 7.3e-24 115.5 262 35.9
A06p11170 Brassica napus HOM05D005305 ORTHO05D006394 2.8e-23 113.6 259 34.7
BolC5t30066H Brassica oleracea HOM05D005305 ORTHO05D006394 3.6e-23 113.2 246 35.4
BcaB03g13072 Brassica carinata HOM05D005305 ORTHO05D006394 6.1e-23 112.5 281 35.6
Thhalv10009974m.g Eutrema salsugineum HOM05D005305 ORTHO05D006394 6.1e-23 112.5 249 35.7
A08p31700 Brassica napus HOM05D005305 ORTHO05D006394 1.0e-22 111.7 303 34.0
BcaC07g38772 Brassica carinata HOM05D005305 ORTHO05D006394 1.4e-22 111.3 252 35.7
C08p17050 Brassica napus HOM05D005305 ORTHO05D006394 1.4e-22 111.3 252 35.7
BolC8t49330H Brassica oleracea HOM05D005305 ORTHO05D006394 1.4e-22 111.3 252 35.7
Oeu000200.2 Olea europaea HOM05D005305 ORTHO05D006394 2.3e-22 110.5 259 35.5
MBI17_g24510_MAGBIO Magnolia biondii HOM05D005305 ORTHO05D006394 5.2e-22 109.4 258 34.9
ECA236G3147 Erigeron canadensis HOM05D005305 ORTHO05D006394 2.0e-21 107.5 192 37.0
BcaC05g25447 Brassica carinata HOM05D005305 ORTHO05D006394 2.6e-21 107.1 249 35.7
C05p13290 Brassica napus HOM05D005305 ORTHO05D006394 2.6e-21 107.1 249 35.7
Lsat_1_v5_gn_7_79481 Lactuca sativa HOM05D005305 ORTHO05D006394 3.4e-21 106.7 212 34.4
Sp1g13500 Schrenkiella parvula HOM05D005305 ORTHO05D006394 4.4e-21 106.3 247 36.0
HanXRQChr10g0300271 Helianthus annuus HOM05D005305 ORTHO05D006394 7.5e-21 105.5 217 33.2
BraA08t35092Z Brassica rapa HOM05D005305 ORTHO05D006394 1.3e-20 104.8 261 34.9
Lsat_1_v5_gn_5_107520 Lactuca sativa HOM05D005305 ORTHO05D006394 1.3e-20 104.8 278 32.7
CARHR015700 Cardamine hirsuta HOM05D005305 ORTHO05D006394 2.9e-20 103.6 272 33.5
SalBow5G2993 Salvia bowleyana HOM05D005305 ORTHO05D006394 4.9e-20 102.8 229 32.8
Carub.0001s1494 Capsella rubella HOM05D005305 ORTHO05D006394 6.4e-20 102.4 293 33.1
Nn5g28774 Nelumbo nucifera HOM05D005305 ORTHO05D006394 8.3e-20 102.1 214 34.6
HanXRQChr11g0337491 Helianthus annuus HOM05D005305 ORTHO05D006394 1.9e-19 100.9 317 31.2
Aa31LG2G8790 Aethionema arabicum HOM05D005305 ORTHO05D006394 2.4e-19 100.5 187 37.4
BolC2t10994H Brassica oleracea HOM05D005305 ORTHO05D006394 5.4e-19 99.4 197 37.6
Duzib187G0918 Durio zibethinus HOM05D005305 ORTHO05D006394 5.4e-19 99.4 188 36.7
TAR624G0561 Trochodendron aralioides HOM05D005305 ORTHO05D006394 9.2e-19 98.6 181 36.5
HanXRQChr10g0294801 Helianthus annuus HOM05D005305 ORTHO05D006394 1.2e-18 98.2 199 33.7
SGA_v2.0_scaffold47G17682 Striga asiatica HOM05D005305 ORTHO05D006394 1.2e-18 98.2 164 37.8
FAN22G2313 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.0e-18 97.4 170 39.4
Migut.L00049 Erythranthe guttata HOM05D005305 ORTHO05D006394 4.6e-18 96.3 162 40.1
FAN15G2678 Fragaria x ananassa HOM05D005305 ORTHO05D006394 6.0e-18 95.9 208 35.6
FvH4_2g02450 Fragaria vesca HOM05D005305 ORTHO05D006394 1.3e-17 94.7 208 35.1
MBI17_g24663_MAGBIO Magnolia biondii HOM05D005305 ORTHO05D006394 1.7e-17 94.4 288 31.9
Ah.03g133360 Amaranthus hybridus HOM05D005305 ORTHO05D006394 3.9e-17 93.2 170 34.7
A02p31660 Brassica napus HOM05D005305 ORTHO05D006394 3.9e-17 93.2 197 36.5
PGSC0003DMG400035592 Solanum tuberosum HOM05D005305 ORTHO05D006394 3.9e-17 93.2 170 37.1
Thecc.01G118700 Theobroma cacao HOM05D005305 ORTHO05D006394 3.9e-17 93.2 187 35.3
Oeu035198.1 Olea europaea HOM05D005305 ORTHO05D006394 6.6e-17 92.4 173 35.3
FvH4_2g02380 Fragaria vesca HOM05D005305 ORTHO05D006394 8.6e-17 92.0 207 34.8
PGR042G0513 Punica granatum HOM05D005305 ORTHO05D006394 1.5e-16 91.3 266 33.1
COL.COLO4_22382 Corchorus olitorius HOM05D005305 ORTHO05D006394 1.9e-16 90.9 170 35.9
Potri.019G002300 Populus trichocarpa HOM05D005305 ORTHO05D006394 1.9e-16 90.9 186 34.4
Solyc11g005490.1 Solanum lycopersicum HOM05D005305 ORTHO05D006394 1.9e-16 90.9 170 36.5
Sopen11g001490 Solanum pennellii HOM05D005305 ORTHO05D006394 1.9e-16 90.9 170 36.5
CAN.G516.6 Capsicum annuum HOM05D005305 ORTHO05D006394 3.3e-16 90.1 170 36.5
Nitab4.5_0001582g0090 Nicotiana tabacum HOM05D005305 ORTHO05D006394 3.3e-16 90.1 168 36.9
AUR62024239 Chenopodium quinoa HOM05D005305 ORTHO05D006394 4.3e-16 89.7 252 32.5
Gohir.A11G210433 Gossypium hirsutum HOM05D005305 ORTHO05D006394 4.3e-16 89.7 228 33.3
Nn1g06067 Nelumbo nucifera HOM05D005305 ORTHO05D006394 4.3e-16 89.7 254 30.7
Sc04g0009640 Simmondsia chinensis HOM05D005305 ORTHO05D006394 4.3e-16 89.7 171 32.7
Gohir.D12G092500 Gossypium hirsutum HOM05D005305 ORTHO05D006394 7.3e-16 89.0 192 35.9
Gorai.008G100000 Gossypium raimondii HOM05D005305 ORTHO05D006394 7.3e-16 89.0 192 35.9
Nitab4.5_0002138g0070 Nicotiana tabacum HOM05D005305 ORTHO05D006394 9.5e-16 88.6 168 37.5
AUR62005501 Chenopodium quinoa HOM05D005305 ORTHO05D006394 1.6e-15 87.8 258 31.0
Sp2g12560 Schrenkiella parvula HOM05D005305 ORTHO05D006394 1.6e-15 87.8 263 31.6
TWI31G0537 Tripterygium wilfordii HOM05D005305 ORTHO05D006394 1.6e-15 87.8 197 33.5
Sabra19G0004600 Salix brachista HOM05D005305 ORTHO05D006394 3.6e-15 86.7 186 34.4
Potri.001G306800 Populus trichocarpa HOM05D005305 ORTHO05D006394 1.1e-14 85.1 199 34.2
PSO730G0002 Papaver somniferum HOM05D005305 ORTHO05D006394 1.8e-14 84.3 198 30.3
Manes.12G149900 Manihot esculenta HOM05D005305 ORTHO05D006394 3.1e-14 83.6 194 33.0
Manes.13G081800 Manihot esculenta HOM05D005305 ORTHO05D006394 8.9e-14 82.0 255 27.1
Atru.chr4.616 Acer truncatum HOM05D005305 ORTHO05D006394 2.6e-13 80.5 188 32.4
TWI79G0764 Tripterygium wilfordii HOM05D005305 ORTHO05D006394 3.4e-13 80.1 197 31.0
Dinv02718 Davidia involucrata HOM05D005305 ORTHO05D006394 4.4e-13 79.7 125 39.2
Cpa.g.sc72.34 Carica papaya HOM05D005305 ORTHO05D006394 7.5e-13 79.0 185 34.1
FvH4_4g13350 Fragaria vesca HOM05D005305 ORTHO05D006394 7.5e-13 79.0 144 42.4
FAN02G4273 Fragaria x ananassa HOM05D005305 ORTHO05D006394 9.8e-13 78.6 115 42.6
FAN12G2268 Fragaria x ananassa HOM05D005305 ORTHO05D006394 9.8e-13 78.6 121 43.8
FvH4_4g36540 Fragaria vesca HOM05D005305 ORTHO05D006394 1.3e-12 78.2 121 43.8
FAN02G0608 Fragaria x ananassa HOM05D005305 ORTHO05D006394 3.7e-12 76.6 115 41.7
unitig_32.g10686 Utricularia gibba HOM05D005305 ORTHO05D006394 8.3e-12 75.5 244 29.1
FAN20G0407 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.4e-11 74.7 193 35.8
FAN20G1442 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.4e-11 74.7 193 35.8
FAN20G2254 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.4e-11 74.7 193 35.8
FAN20G2361 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.4e-11 74.7 193 35.8
DCAR_001409 Daucus carota HOM05D005305 ORTHO05D006394 1.9e-11 74.3 199 32.2
ECA234G0387 Erigeron canadensis HOM05D005305 ORTHO05D006394 1.9e-11 74.3 169 32.0
BraA02t08169Z Brassica rapa HOM05D005305 ORTHO05D006394 7.0e-11 72.4 198 33.8
FAN24G2323 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.7e-10 70.5 192 34.4
FAN05G3957 Fragaria x ananassa HOM05D005305 ORTHO05D006394 3.5e-10 70.1 115 39.1
FAN22G1821 Fragaria x ananassa HOM05D005305 ORTHO05D006394 4.6e-10 69.7 88 48.9
FvH4_2g04910 Fragaria vesca HOM05D005305 ORTHO05D006394 3.0e-09 67.0 162 35.2
C02p49000 Brassica napus HOM05D005305 ORTHO05D006394 3.3e-08 63.5 105 38.1
FAN02G3216 Fragaria x ananassa HOM05D005305 ORTHO05D006394 4.3e-08 63.2 195 32.3
Migut.F01128 Erythranthe guttata HOM05D007205 ORTHO05D009175 8.9e-06 55.5 129 27.1


User provided reference genes

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