Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p018076 Quercus lobata HOM05D006750 ORTHO05D008426 4.3e-89 331.3 162 100.0
FvH4_3g12150 Fragaria vesca HOM05D006750 ORTHO05D008426 4.8e-48 194.9 166 59.0
FAN16G3293 Fragaria x ananassa HOM05D006750 ORTHO05D008426 6.3e-48 194.5 152 61.8
Prupe.4G110300 Prunus persica HOM05D006750 ORTHO05D008426 8.2e-48 194.1 151 62.3
Ciclev10016972m.g Citrus clementina HOM05D006750 ORTHO05D008426 1.4e-47 193.4 156 60.9
FAN25G1681 Fragaria x ananassa HOM05D006750 ORTHO05D008426 1.4e-47 193.4 166 58.4
Manes.11G104340 Manihot esculenta HOM05D006750 ORTHO05D008426 1.4e-47 193.4 141 62.4
Potri.012G120220 Populus trichocarpa HOM05D006750 ORTHO05D008426 1.4e-47 193.4 145 64.8
RcHm_v2.0_Chr5g0019891 Rosa chinensis HOM05D006750 ORTHO05D008426 1.4e-47 193.4 166 60.2
Potri.012G120100 Populus trichocarpa HOM05D006750 ORTHO05D008426 2.4e-47 192.6 145 65.5
CiPaw.10G065100 Carya illinoinensis HOM05D006750 ORTHO05D008426 6.9e-47 191.0 167 56.9
vmacro03507 Vaccinium macrocarpon HOM05D006750 ORTHO05D008426 6.9e-47 191.0 137 67.2
Haze_06026 Corylus avellana HOM05D006750 ORTHO05D008426 1.2e-46 190.3 147 65.3
Sed0026407 Sechium edule HOM05D006750 ORTHO05D008426 1.2e-46 190.3 143 64.3
TWI63G0081 Tripterygium wilfordii HOM05D006750 ORTHO05D008426 1.2e-46 190.3 166 58.4
MD05G1254400 Malus domestica HOM05D006750 ORTHO05D008426 2.0e-46 189.5 152 60.5
MD10G1234600 Malus domestica HOM05D006750 ORTHO05D008426 2.0e-46 189.5 152 61.8
Haze_06024 Corylus avellana HOM05D006750 ORTHO05D008426 4.5e-46 188.3 147 64.6
Atru.chr12.2220 Acer truncatum HOM05D006750 ORTHO05D008426 7.7e-46 187.6 155 59.4
Actinidia22388 Actinidia chinensis HOM05D006750 ORTHO05D008426 7.7e-46 187.6 154 58.4
CSS0027015 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 2.2e-45 186.0 137 65.7
MELO3C021769.2 Cucumis melo HOM05D006750 ORTHO05D008426 3.8e-45 185.3 146 59.6
Sabra15G0136900 Salix brachista HOM05D006750 ORTHO05D008426 1.9e-44 183.0 144 63.9
Cc09_g06280 Coffea canephora HOM05D006750 ORTHO05D008426 4.2e-44 181.8 147 57.8
ClCG01G009300 Citrullus lanatus HOM05D006750 ORTHO05D008426 5.5e-44 181.4 143 60.1
CsaV3_1G046580 Cucumis sativus L. HOM05D006750 ORTHO05D008426 5.5e-44 181.4 146 60.3
RhsimUnG0232200 Rhododendron simsii HOM05D006750 ORTHO05D008426 4.6e-43 178.3 137 63.5
CANSAT21G0613 Cannabis sativa HOM05D006750 ORTHO05D008426 1.4e-42 176.8 145 58.6
Thecc.06G140200 Theobroma cacao HOM05D006750 ORTHO05D008426 1.8e-42 176.4 160 56.9
Thecc.06G141200 Theobroma cacao HOM05D006750 ORTHO05D008426 3.9e-42 175.3 160 56.2
Solyc02g069070.3 Solanum lycopersicum HOM05D006750 ORTHO05D008426 6.7e-42 174.5 142 61.3
Eucgr.D01041 Eucalyptus grandis HOM05D006750 ORTHO05D008426 1.1e-41 173.7 138 59.4
DCAR_004323 Daucus carota HOM05D006750 ORTHO05D008426 5.7e-41 171.4 135 59.3
Hma1.2p1_0040F.1_g025070 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 5.7e-41 171.4 124 61.3
HanXRQChr07g0189661 Helianthus annuus HOM05D006750 ORTHO05D008426 7.4e-41 171.0 137 59.1
Nitab4.5_0003773g0080 Nicotiana tabacum HOM05D006750 ORTHO05D008426 3.7e-40 168.7 141 59.6
GSVIVG01012094001 Vitis vinifera HOM05D006750 ORTHO05D008426 3.7e-40 168.7 147 55.8
CAN.G1222.19 Capsicum annuum HOM05D006750 ORTHO05D008426 8.2e-40 167.5 139 59.7
Lj4g0008374 Lotus japonicus HOM05D006750 ORTHO05D008426 8.2e-40 167.5 141 58.9
TAR627G0115 Trochodendron aralioides HOM05D006750 ORTHO05D008426 8.2e-40 167.5 138 58.7
Carub.0004s2150 Capsella rubella HOM05D006750 ORTHO05D008426 1.4e-39 166.8 147 55.8
Dinv11873 Davidia involucrata HOM05D006750 ORTHO05D008426 1.8e-39 166.4 144 59.0
BcaB02g09122 Brassica carinata HOM05D006750 ORTHO05D008426 2.4e-39 166.0 147 53.1
Lj1A1143T38 Lonicera japonica HOM05D006750 ORTHO05D008426 2.4e-39 166.0 135 58.5
CARHR134300 Cardamine hirsuta HOM05D006750 ORTHO05D008426 3.1e-39 165.6 143 57.3
Ca_21154_v3 Cicer arietinum L. HOM05D006750 ORTHO05D008426 3.1e-39 165.6 143 57.3
Gorai.009G437900 Gossypium raimondii HOM05D006750 ORTHO05D008426 4.1e-39 165.2 161 55.9
Nn7g38126 Nelumbo nucifera HOM05D006750 ORTHO05D008426 4.1e-39 165.2 173 48.0
Gohir.D05G369200 Gossypium hirsutum HOM05D006750 ORTHO05D008426 5.3e-39 164.9 161 55.9
Nitab4.5_0002056g0050 Nicotiana tabacum HOM05D006750 ORTHO05D008426 5.3e-39 164.9 141 58.9
CSS0019703 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 6.9e-39 164.5 124 62.9
Thhalv10017350m.g Eutrema salsugineum HOM05D006750 ORTHO05D008426 9.1e-39 164.1 155 53.5
BcaC02g11618 Brassica carinata HOM05D006750 ORTHO05D008426 1.2e-38 163.7 143 54.5
C04p13120 Brassica napus HOM05D006750 ORTHO05D008426 1.2e-38 163.7 143 54.5
Phvul.003G153500 Phaseolus vulgaris HOM05D006750 ORTHO05D008426 1.2e-38 163.7 141 56.7
BolC4t22432H Brassica oleracea HOM05D006750 ORTHO05D008426 1.5e-38 163.3 143 55.2
Aqoxy1G01469 Aquilegia oxysepala HOM05D006750 ORTHO05D008426 2.0e-38 162.9 150 51.3
A05p06970 Brassica napus HOM05D006750 ORTHO05D008426 2.0e-38 162.9 143 55.2
BraA05t19661Z Brassica rapa HOM05D006750 ORTHO05D008426 3.4e-38 162.2 143 53.8
AL4G36810 Arabidopsis lyrata HOM05D006750 ORTHO05D008426 7.7e-38 161.0 153 53.6
Gohir.A04G017000 Gossypium hirsutum HOM05D006750 ORTHO05D008426 1.0e-37 160.6 161 54.7
Psat0s3953g0080 Pisum sativum HOM05D006750 ORTHO05D008426 1.0e-37 160.6 141 53.2
VMungo1215G0360 Vigna mungo HOM05D006750 ORTHO05D008426 1.0e-37 160.6 141 56.0
AT2G39440 Arabidopsis thaliana HOM05D006750 ORTHO05D008426 1.3e-37 160.2 143 55.9
BcaC02g12068 Brassica carinata HOM05D006750 ORTHO05D008426 1.3e-37 160.2 143 54.5
Cfa000723 Carpinus fangiana HOM05D006750 ORTHO05D008426 2.2e-37 159.5 105 71.4
PGR142G2582 Punica granatum HOM05D006750 ORTHO05D008426 2.9e-37 159.1 144 53.5
C04p08300 Brassica napus HOM05D006750 ORTHO05D008426 3.8e-37 158.7 143 53.8
Sp4g21740 Schrenkiella parvula HOM05D006750 ORTHO05D008426 8.5e-37 157.5 159 50.3
Migut.M01971 Erythranthe guttata HOM05D006750 ORTHO05D008426 1.1e-36 157.1 137 53.3
Duzib235G0570 Durio zibethinus HOM05D006750 ORTHO05D008426 1.4e-36 156.8 147 55.1
Glyma.02G206800 Glycine max HOM05D006750 ORTHO05D008426 1.9e-36 156.4 142 53.5
ECA246G4127 Erigeron canadensis HOM05D006750 ORTHO05D008426 4.2e-36 155.2 132 55.3
Lsat_1_v5_gn_5_36321 Lactuca sativa HOM05D006750 ORTHO05D008426 5.5e-36 154.8 154 51.9
TPR.G24866 Trifolium pratense HOM05D006750 ORTHO05D008426 9.4e-36 154.1 161 48.4
unitig_748.g7497 Utricularia gibba HOM05D006750 ORTHO05D008426 1.2e-35 153.7 153 49.7
THA.LOC104824253 Tarenaya hassleriana HOM05D006750 ORTHO05D008426 2.7e-35 152.5 151 48.3
PSO541G1844 Papaver somniferum HOM05D006750 ORTHO05D008426 3.6e-35 152.1 151 48.3
SGA_v2.0_scaffold298G47680 Striga asiatica HOM05D006750 ORTHO05D008426 7.9e-35 151.0 137 53.3
Oeu052673.2 Olea europaea HOM05D006750 ORTHO05D008426 1.0e-34 150.6 149 49.7
PSO675G8070 Papaver somniferum HOM05D006750 ORTHO05D008426 1.4e-34 150.2 151 47.7
SalBow8G0594 Salvia bowleyana HOM05D006750 ORTHO05D008426 2.3e-34 149.4 157 46.5
SalBow8G2736 Salvia bowleyana HOM05D006750 ORTHO05D008426 2.3e-34 149.4 157 46.5
arahy.Tifrunner.gnm1.ann1.8322W6 Arachis hypogaea HOM05D006750 ORTHO05D008426 3.0e-34 149.1 153 47.7
Lalb_Chr02g0152091 Lupinus albus HOM05D006750 ORTHO05D008426 5.1e-34 148.3 141 53.2
MSTRG.22268 Avicennia marina HOM05D006750 ORTHO05D008426 1.5e-33 146.7 135 52.6
arahy.Tifrunner.gnm1.ann1.RPZE8L Arachis hypogaea HOM05D006750 ORTHO05D008426 2.0e-33 146.4 153 47.1
Sp4g08180 Schrenkiella parvula HOM05D006750 ORTHO05D008426 4.4e-33 145.2 149 47.0
AUR62007362 Chenopodium quinoa HOM05D006750 ORTHO05D008426 7.4e-33 144.4 138 51.4
AUR62018626 Chenopodium quinoa HOM05D006750 ORTHO05D008426 1.8e-31 139.8 138 50.7
COL.COLO4_30981 Corchorus olitorius HOM05D006750 ORTHO05D008426 4.1e-31 138.7 104 63.5
CDE06G2778 Ceratophyllum demersum HOM05D006750 ORTHO05D008426 5.3e-31 138.3 139 46.8
EL10Ac2g02809 Beta vulgaris HOM05D006750 ORTHO05D008426 4.5e-30 135.2 143 46.9
HPP92_004186 Vanilla planifolia HOM05D006750 ORTHO05D008426 1.7e-29 133.3 141 47.5
Aa31LG5G20440 Aethionema arabicum HOM05D004294 ORTHO05D004899 1.1e-28 130.6 102 62.7
Os02g0168900 Oryza sativa ssp. japonica HOM05D006750 ORTHO05D008426 5.5e-28 128.3 135 48.9
Hma1.2p1_0040F.1_g025080 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 2.1e-27 126.3 86 62.8
Peaxi162Scf00149g00921 Petunia axillaris HOM05D006750 ORTHO05D008426 4.7e-27 125.2 141 47.5
ATR0763G132 Amborella trichopoda HOM05D006750 ORTHO05D008426 2.3e-26 122.9 99 57.6
Sc05g0005750 Simmondsia chinensis HOM05D006750 ORTHO05D008426 7.5e-25 117.9 126 48.4
Ah.12g055560 Amaranthus hybridus HOM05D002269 ORTHO05D002421 9.7e-25 117.5 159 44.0
SMO367G1186 Selaginella moellendorffii HOM05D006750 ORTHO05D008426 1.1e-23 114.0 129 42.6
CBR_g39953 Chara braunii HOM05D006750 ORTHO05D008426 1.6e-22 110.2 158 36.7
Mapoly0007s0049 Marchantia polymorpha HOM05D006750 ORTHO05D008426 1.6e-22 110.2 139 40.3
Pp3c2_9480 Physcomitrium patens HOM05D006750 ORTHO05D008426 1.6e-19 100.1 143 38.5
SHI31544 Sapria himalayana HOM05D006750 ORTHO05D008426 2.8e-16 89.4 212 30.2
Zm00001eb233030 Zea mays HOM05D006750 ORTHO05D008426 1.1e-15 87.4 137 34.3
Sopen02g018170 Solanum pennellii HOM05D006750 ORTHO05D008426 2.4e-15 86.3 67 62.7
Hund11170 Selenicereus undatus HOM05D006750 ORTHO05D008426 3.8e-13 79.0 73 54.8
CARHR087370 Cardamine hirsuta HOM05D006750 ORTHO05D008426 1.1e-12 77.4 71 49.3
Hund11169 Selenicereus undatus HOM05D006750 ORTHO05D008426 3.6e-11 72.4 91 45.1
Cre08.g378100 Chlamydomonas reinhardtii HOM05D006750 ORTHO05D008426 8.0e-11 71.2 132 29.5
AagrBONN_evm.TU.Sc2ySwM_344.3424 Anthoceros agrestis HOM05D006750 ORTHO05D008426 8.8e-10 67.8 94 37.2
Cpa.g.sc135.32 Carica papaya HOM05D006750 ORTHO05D008426 2.0e-09 66.6 75 42.7
TPR.G24917 Trifolium pratense HOM05D006750 ORTHO05D008426 8.3e-08 61.2 77 45.5
Zm00001eb233050 Zea mays HOM05D006750 ORTHO05D008426 9.2e-07 57.8 103 34.0


User provided reference genes

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