Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p017833 Quercus lobata HOM05D007226 ORTHO05D009160 1.3e-102 376.3 181 100.0
CiPaw.09G078000 Carya illinoinensis HOM05D007226 ORTHO05D009160 3.8e-70 268.5 186 74.7
Cfa000717 Carpinus fangiana HOM05D007226 ORTHO05D009160 2.1e-68 262.7 154 82.5
GSVIVG01012076001 Vitis vinifera HOM05D007226 ORTHO05D009160 4.5e-63 245.0 149 80.5
Potri.015G121101 Populus trichocarpa HOM05D007226 ORTHO05D009160 8.5e-62 240.7 154 76.6
Prupe.4G111200 Prunus persica HOM05D007226 ORTHO05D009160 8.5e-62 240.7 153 74.5
Haze_06036 Corylus avellana HOM05D007226 ORTHO05D009160 5.5e-61 238.0 224 59.4
Thecc.06G141800 Theobroma cacao HOM05D007226 ORTHO05D009160 1.2e-60 236.9 177 66.1
Actinidia22392 Actinidia chinensis HOM05D007226 ORTHO05D009160 1.6e-60 236.5 164 73.8
Thhalv10001050m.g Eutrema salsugineum HOM05D007226 ORTHO05D009160 2.1e-60 236.1 170 67.6
Gohir.D06G145000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 4.7e-60 235.0 177 63.8
Gorai.010G168700 Gossypium raimondii HOM05D007226 ORTHO05D009160 4.7e-60 235.0 177 63.8
CSS0023119 Camellia sinensis var. sinensis HOM05D007226 ORTHO05D009160 6.1e-60 234.6 145 77.9
Duzib192G0307 Durio zibethinus HOM05D007226 ORTHO05D009160 6.1e-60 234.6 161 72.0
MD05G1252700 Malus domestica HOM05D007226 ORTHO05D009160 6.1e-60 234.6 153 73.9
CARHR177680 Cardamine hirsuta HOM05D007226 ORTHO05D009160 8.0e-60 234.2 160 71.2
Cc09_g06180 Coffea canephora HOM05D007226 ORTHO05D009160 8.0e-60 234.2 182 66.5
Migut.M01975 Erythranthe guttata HOM05D007226 ORTHO05D009160 2.3e-59 232.6 181 65.7
Nn7g38162 Nelumbo nucifera HOM05D007226 ORTHO05D009160 4.0e-59 231.9 134 79.9
Gohir.A06G141000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 5.2e-59 231.5 170 65.9
Dinv05963 Davidia involucrata HOM05D007226 ORTHO05D009160 6.7e-59 231.1 186 65.6
SGA_v2.0_scaffold175G39365 Striga asiatica HOM05D007226 ORTHO05D009160 6.7e-59 231.1 134 79.1
FAN21G0149 Fragaria x ananassa HOM05D007226 ORTHO05D009160 1.2e-58 230.3 165 70.9
HanXRQChr14g0447221 Helianthus annuus HOM05D007226 ORTHO05D009160 2.0e-58 229.6 168 67.9
Sabra15G0137600 Salix brachista HOM05D007226 ORTHO05D009160 3.3e-58 228.8 169 68.6
BcaC03g16718 Brassica carinata HOM05D007226 ORTHO05D009160 4.4e-58 228.4 160 69.4
FvH4_3g12220 Fragaria vesca HOM05D007226 ORTHO05D009160 4.4e-58 228.4 172 68.0
C02p45740 Brassica napus HOM05D007226 ORTHO05D009160 5.7e-58 228.0 160 69.4
Lj4g0002757 Lotus japonicus HOM05D007226 ORTHO05D009160 5.7e-58 228.0 153 69.3
AT5G45040 Arabidopsis thaliana HOM05D007226 ORTHO05D009160 7.5e-58 227.6 179 65.4
BolC2t10635H Brassica oleracea HOM05D007226 ORTHO05D009160 7.5e-58 227.6 160 68.8
ECA238G0615 Erigeron canadensis HOM05D007226 ORTHO05D009160 7.5e-58 227.6 150 76.0
Sp2g09820 Schrenkiella parvula HOM05D007226 ORTHO05D009160 7.5e-58 227.6 144 74.3
Medtr4g083990 Medicago truncatula HOM05D007226 ORTHO05D009160 9.7e-58 227.3 162 67.3
Rhsim02G0212700 Rhododendron simsii HOM05D007226 ORTHO05D009160 9.7e-58 227.3 154 72.7
TWI38G0719 Tripterygium wilfordii HOM05D007226 ORTHO05D009160 9.7e-58 227.3 158 72.8
Ca_18766_v3 Cicer arietinum L. HOM05D007226 ORTHO05D009160 1.3e-57 226.9 138 76.8
TAR371G1071 Trochodendron aralioides HOM05D007226 ORTHO05D009160 1.3e-57 226.9 162 69.8
Cpa.g.sc135.15 Carica papaya HOM05D007226 ORTHO05D009160 1.7e-57 226.5 164 65.2
Eucgr.E01876 Eucalyptus grandis HOM05D007226 ORTHO05D009160 1.7e-57 226.5 134 78.4
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 1.7e-57 226.5 127 80.3
Ciclev10017084m.g Citrus clementina HOM05D007226 ORTHO05D009160 2.8e-57 225.7 148 70.9
Phvul.002G098700 Phaseolus vulgaris HOM05D007226 ORTHO05D009160 2.8e-57 225.7 160 67.5
VMungo0251G0617 Vigna mungo HOM05D007226 ORTHO05D009160 3.7e-57 225.3 132 77.3
Carub.0008s0327 Capsella rubella HOM05D007226 ORTHO05D009160 4.8e-57 224.9 136 76.5
BolC2t10627H Brassica oleracea HOM05D007226 ORTHO05D009160 6.3e-57 224.6 160 68.8
FAN25G1348 Fragaria x ananassa HOM05D007226 ORTHO05D009160 6.3e-57 224.6 172 68.0
BcaB07g30483 Brassica carinata HOM05D007226 ORTHO05D009160 1.1e-56 223.8 176 64.8
BraA02t07911Z Brassica rapa HOM05D007226 ORTHO05D009160 1.1e-56 223.8 140 73.6
RcHm_v2.0_Chr5g0020011 Rosa chinensis HOM05D007226 ORTHO05D009160 1.1e-56 223.8 119 86.6
Glyma.07G221900 Glycine max HOM05D007226 ORTHO05D009160 1.8e-56 223.0 165 66.1
Nitab4.5_0003773g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 2.4e-56 222.6 134 76.9
AL8G14200 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 3.1e-56 222.2 180 64.4
AL8G14380 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 4.1e-56 221.9 180 64.4
CAN.G149.55 Capsicum annuum HOM05D007226 ORTHO05D009160 5.3e-56 221.5 173 64.7
PGSC0003DMG400010353 Solanum tuberosum HOM05D007226 ORTHO05D009160 7.0e-56 221.1 172 65.7
A02p28790 Brassica napus HOM05D007226 ORTHO05D009160 9.1e-56 220.7 160 68.1
COL.COLO4_30987 Corchorus olitorius HOM05D007226 ORTHO05D009160 9.1e-56 220.7 129 79.1
Sopen02g018030 Solanum pennellii HOM05D007226 ORTHO05D009160 1.6e-55 219.9 177 65.0
Lalb_Chr05g0219731 Lupinus albus HOM05D007226 ORTHO05D009160 2.0e-55 219.5 160 65.6
Manes.16G056825 Manihot esculenta HOM05D007226 ORTHO05D009160 2.0e-55 219.5 135 76.3
SalBow6G7060 Salvia bowleyana HOM05D007226 ORTHO05D009160 2.7e-55 219.2 134 73.9
SalBow8G0530 Salvia bowleyana HOM05D007226 ORTHO05D009160 2.7e-55 219.2 134 73.9
Solyc02g068930.4 Solanum lycopersicum HOM05D007226 ORTHO05D009160 7.7e-55 217.6 134 77.6
DCAR_004326 Daucus carota HOM05D007226 ORTHO05D009160 5.0e-54 214.9 139 71.9
Aa31LG9G8170 Aethionema arabicum HOM05D007226 ORTHO05D009160 4.2e-53 211.8 162 64.2
Atru.chr10.515 Acer truncatum HOM05D007226 ORTHO05D009160 9.4e-53 210.7 181 58.6
Lsat_1_v5_gn_2_62900 Lactuca sativa HOM05D007226 ORTHO05D009160 1.2e-52 210.3 163 65.0
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 1.6e-52 209.9 130 76.9
ClCG01G025800 Citrullus lanatus HOM05D007226 ORTHO05D009160 2.7e-52 209.1 132 72.7
TPR.G20974 Trifolium pratense HOM05D007226 ORTHO05D009160 2.7e-52 209.1 114 81.6
PSO675G1576 Papaver somniferum HOM05D007226 ORTHO05D009160 6.1e-52 208.0 133 73.7
Peaxi162Scf00149g00723 Petunia axillaris HOM05D007226 ORTHO05D009160 6.1e-52 208.0 111 84.7
THA.LOC104812913 Tarenaya hassleriana HOM05D007226 ORTHO05D009160 1.8e-51 206.5 148 66.2
arahy.Tifrunner.gnm1.ann1.X3ZR55 Arachis hypogaea HOM05D007226 ORTHO05D009160 2.0e-50 203.0 173 58.4
vmacro03514 Vaccinium macrocarpon HOM05D007226 ORTHO05D009160 2.6e-50 202.6 197 56.9
Aqoxy1G01459 Aquilegia oxysepala HOM05D007226 ORTHO05D009160 4.4e-50 201.8 166 61.4
CsaV3_6G053010 Cucumis sativus L. HOM05D007226 ORTHO05D009160 8.3e-49 197.6 174 59.2
Oeu056023.2 Olea europaea HOM05D007226 ORTHO05D009160 8.3e-49 197.6 103 83.5
CDE06G2689 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 1.8e-48 196.4 151 62.9
arahy.Tifrunner.gnm1.ann1.8FEK6M Arachis hypogaea HOM05D007226 ORTHO05D009160 9.1e-48 194.1 107 76.6
Nitab4.5_0001288g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 2.7e-47 192.6 182 56.6
CDE02G1897 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 1.7e-46 189.9 144 63.9
MELO3C007008.2 Cucumis melo HOM05D007226 ORTHO05D009160 2.3e-46 189.5 101 79.2
C02p45640 Brassica napus HOM05D007226 ORTHO05D009160 1.9e-45 186.4 136 67.6
Sc15g0002750 Simmondsia chinensis HOM05D007226 ORTHO05D009160 4.2e-45 185.3 107 73.8
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 2.3e-43 179.5 111 75.7
ATR0763G163 Amborella trichopoda HOM05D007226 ORTHO05D009160 1.7e-41 173.3 204 47.5
Sed0015403 Sechium edule HOM05D007226 ORTHO05D009160 5.9e-39 164.9 92 75.0
SEGI_36655 Sequoiadendron giganteum HOM05D007226 ORTHO05D009160 4.3e-37 158.7 117 60.7
SMO356G0712 Selaginella moellendorffii HOM05D007226 ORTHO05D009160 4.7e-36 155.2 121 59.5
Psat7g130920 Pisum sativum HOM05D007226 ORTHO05D009160 1.8e-35 153.3 118 65.3
AagrBONN_evm.TU.Sc2ySwM_369.234 Anthoceros agrestis HOM05D007226 ORTHO05D009160 1.5e-34 150.2 118 55.9
Pp3c13_8590 Physcomitrium patens HOM05D007226 ORTHO05D009160 4.1e-32 142.1 125 51.2
Glyma.20G020600 Glycine max HOM05D007226 ORTHO05D009160 1.2e-31 140.6 150 49.3
Mapoly0135s0037 Marchantia polymorpha HOM05D007226 ORTHO05D009160 1.6e-31 140.2 178 41.6
MBI19_g38421_MAGBIO Magnolia biondii HOM05D007226 ORTHO05D009160 1.3e-30 137.1 152 49.3
HanXRQChr14g0447281 Helianthus annuus HOM05D007226 ORTHO05D009160 2.8e-28 129.4 130 52.3
HPP92_015945 Vanilla planifolia HOM05D007226 ORTHO05D009160 5.2e-27 125.2 136 47.1
Cre16.g670950 Chlamydomonas reinhardtii HOM05D007226 ORTHO05D009160 1.5e-26 123.6 89 57.3
Lj2C351T11 Lonicera japonica HOM05D007226 ORTHO05D009160 2.0e-26 123.2 68 79.4
MCO04G097 Micromonas commoda HOM05D007226 ORTHO05D009160 7.5e-26 121.3 89 56.2
Hma1.2p1_0040F.1_g025140 Hydrangea macrophylla HOM05D007226 ORTHO05D009160 6.4e-25 118.2 59 88.1
PSO541G5038 Papaver somniferum HOM05D007226 ORTHO05D009160 1.1e-24 117.5 85 69.4
PRCOL_00005064 Prasinoderma coloniale HOM05D007226 ORTHO05D009160 4.4e-18 95.5 89 47.2
MD10G1233800 Malus domestica HOM05D007226 ORTHO05D009160 7.8e-15 84.7 104 46.2
HPP92_015957 Vanilla planifolia HOM05D007226 ORTHO05D009160 1.0e-06 57.8 41 56.1


User provided reference genes

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